mRNA_P-wetherbeei_contig15476.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15476.1.1 vs. uniprot
Match: A0A257LD01_9BACT (GH16 domain-containing protein n=1 Tax=Bacteroidetes bacterium B1(2017) TaxID=2015582 RepID=A0A257LD01_9BACT) HSP 1 Score: 112 bits (280), Expect = 9.160e-25 Identity = 57/153 (37.25%), Postives = 83/153 (54.25%), Query Frame = 1
Query: 1 FDGTELDASIWEHQLGDGCPDLCRWGTGQLQSFAKENALVADDQFRIEARSDKAADSPKCTSARVRTLGKRDFMSGMISARISFPSDDGMWPIFQLLPSDPDASGYGSWAARYGSVDMFETRNNGEIVRY-MLHFGGAYPNQQNSNQPSTVPN 456
F+GT LD + WE+QLGDGCP+LC WG G+ Q + K +V + +I+A+ + S +SAR+RT+ K DF SG I R P G WP LP++ + YG W G +DM E + Y +H+G PN + + T+P+
Sbjct: 31 FNGTNLDTTFWEYQLGDGCPNLCGWGNGESQYYQKSAVVVENGLLKIKAKKETIGTS-FYSSARIRTINKMDFASGRIEVRARMPIGRGYWPAVWFLPTE---NYYGIWPLS-GEIDMLEAKGQEPTNTYGTIHYGARTPNNKYTGTTYTLPS 178
BLAST of mRNA_P-wetherbeei_contig15476.1.1 vs. uniprot
Match: A0A7Y2CJG4_9BACT (Family 16 glycosylhydrolase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2CJG4_9BACT) HSP 1 Score: 106 bits (264), Expect = 1.410e-22 Identity = 57/140 (40.71%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 1 FDGTELDASIWEHQLGDGCPDLCRWGTGQLQSFAKENALVADDQFRIEARSDKAADSPKCTSARVRTLGKRDFMSGMISARISFPSDDGMWPIFQLLPSDPDASGYGSWAARYGSVDMFETRNNGEI-VRYMLHFGGAYP 417
FDGT LD + WE ++GDGCP LC WG +L+ + ENA VA I A+ + + TSAR+RTL + D+ G R P G+WP F +LP+D S YG+WAA G +D+ E + V LH+G P
Sbjct: 31 FDGTRLDLTKWEPEIGDGCPTLCGWGNNELEYYRAENATVAGGFLTITAKQE-IFGNRLYTSARLRTLNQGDWERGRFEMRAKMPIGQGLWPAFWMLPTD---SVYGTWAAS-GEIDIMEYLGHKPFEVLGTLHYGDTAP 165
BLAST of mRNA_P-wetherbeei_contig15476.1.1 vs. uniprot
Match: A0A7W1FYR0_9BACT (Family 16 glycosylhydrolase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7W1FYR0_9BACT) HSP 1 Score: 103 bits (258), Expect = 5.470e-22 Identity = 57/149 (38.26%), Postives = 75/149 (50.34%), Query Frame = 1
Query: 1 FDGTELDASIWEHQLGDGCPDLCRWGTGQLQSF--AKENALVADDQFRIEARSDKAADSPKCTSARVRTLGKRDFMSGMISARISFPSDDGMWPIFQLLPSDPDASGYGSWAARYGSVDMFETRNNGE-IVRYMLHFGGAYPNQQNSNQ 438
F GT LD W Q GDGCP LC WG +LQ + + N + + IEAR + S K TS ++ TLGK G A I P G+WP F +LP + D W + G +D+ E R + I LH+G A+PN QN +Q
Sbjct: 3 FQGTTLDLKKWAFQTGDGCPSLCGWGNSELQYYTNSNNNIKIQNGNLIIEARQENQGSS-KFTSGKIFTLGKFSQTYGRFEASIRLPKGRGLWPAFWMLPDNND------WP-KTGEIDIMENRGDRPTITNGTLHYGSAWPNNQNDSQ 143
BLAST of mRNA_P-wetherbeei_contig15476.1.1 vs. uniprot
Match: A0A2E4P871_FLASP (Laminarinase n=2 Tax=Flavobacterium TaxID=237 RepID=A0A2E4P871_FLASP) HSP 1 Score: 99.4 bits (246), Expect = 1.630e-21 Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 1
Query: 1 FDGTELDASIWEHQLGDGCPDLCRWGTGQLQSFAKENALVADDQFRIEARSDKAADSPKCTSARVRTLGKRDFMSGMISARISFPSDDGMWPIFQLLPSDPDASGYGSWAARYGSVDMFE-TRNNGEIVRYMLHFGGAYPNQQNSNQ 438
FDG +LD S+W ++LGDGCP++C WG + Q + ++N VA+ I+ +K DS TS R+ T GK++F G I AR P+ G+WP F +L S+ G+ + G +D+ E ++V LH ++ N N+ +
Sbjct: 31 FDGNKLDESVWNYELGDGCPNICGWGNNERQIYTRDNHTVANGMLTIKV--EKEGDS--YTSTRITTAGKKEFKYGYIEARAKIPTGHGIWPAFWMLGSNIKQVGW----PKAGEIDILEYVGKEPDMVFTSLHTQASHGNTINTKK 169
BLAST of mRNA_P-wetherbeei_contig15476.1.1 vs. uniprot
Match: UPI001E459D63 (glycoside hydrolase family 16 protein n=1 Tax=Paraneptunicella aestuarii TaxID=2831148 RepID=UPI001E459D63) HSP 1 Score: 102 bits (254), Expect = 2.270e-21 Identity = 54/145 (37.24%), Postives = 82/145 (56.55%), Query Frame = 1
Query: 1 FDGTELDASIWEHQLGDGCP-DLCRWGTGQLQSFAKENALVADDQFRIEARSDKAADSPKCTSARVRTLGKRD---FMSGMISARISFPSDDGMWPIFQLLPSDPDASGYGSWAARYGSVDMFETRNNGEIVRY-MLHFGGAYPN 420
F+GT+LD + WE Q+GDGC LC WG +LQ + +NA V++ I A+ ++ S TSAR+RT + + +G ARI P+ G+WP F +LP+DPD W G +D+ E+ ++ + +HFG A+PN
Sbjct: 41 FNGTQLDTTKWEAQIGDGCDIGLCGWGNNELQWYKAQNATVSNGVLSITAKKERVR-SKGYTSARLRTANMPNGGQWTNGRFEARIKIPAGQGLWPAFWMLPTDPDQG----WPMS-GEIDIMESTGQASMLAHGTIHFGEAWPN 179
BLAST of mRNA_P-wetherbeei_contig15476.1.1 vs. uniprot
Match: A0A6I4NQZ4_9FLAO (Family 16 glycosylhydrolase n=1 Tax=Flavobacterium hydrocarbonoxydans TaxID=2683249 RepID=A0A6I4NQZ4_9FLAO) HSP 1 Score: 98.6 bits (244), Expect = 3.000e-21 Identity = 50/147 (34.01%), Postives = 80/147 (54.42%), Query Frame = 1
Query: 1 FDGTELDASIWEHQLGDGCPDLCRWGTGQLQSFAKENALVADDQFRIEARSDKAADSPKCTSARVRTLGKRDFMSGMISARISFPSDDGMWPIFQLLPSDPDASGYGSWAARYGSVDMFE-TRNNGEIVRYMLHFGGAYPNQQNSNQ 438
FD +++ S+W ++LGDGCP+LC WG + Q + K+N + D F IEA+ D K TS ++ T GK++F+ G I AR P G+WP F +L ++ D W + G +D+ E + +V LH ++ N N+ +
Sbjct: 29 FDEKKINESVWNYELGDGCPNLCGWGNNERQLYTKDNHEIKDGNFIIEAKKD----GNKYTSTKITTKGKKEFLYGRIEARAKLPVGHGLWPAFWMLGANIDEV---KWP-KTGEIDILEYIGRDPHMVYTTLHTQDSHGNTINTKK 167
BLAST of mRNA_P-wetherbeei_contig15476.1.1 vs. uniprot
Match: A0A4R5H9C2_9ALTE (Glycoside hydrolase family 16 protein n=1 Tax=Alteromonadaceae bacterium M269 TaxID=2546219 RepID=A0A4R5H9C2_9ALTE) HSP 1 Score: 102 bits (253), Expect = 4.670e-21 Identity = 62/150 (41.33%), Postives = 80/150 (53.33%), Query Frame = 1
Query: 1 FDGTELDASIWEHQLGDGCPDLCR--WGTGQLQSFAKENALVADDQFRIEARSDKAADSP----KCTSARVRTLGKRDFMSGMISARISFPSDDGMWPIFQLLPSDPDASGYGSWAARYGSVDMFET-RNNGEIVRYMLHFGGAYPNQQN 429
FDGTELD S WE Q+GDG + WG +LQ + ++N V D IEAR DSP TS R+RT G DF G I A I P G+W F +L SDP S +G+WAAR G +D+ E+ + + HFG +P +N
Sbjct: 53 FDGTELDRSRWEIQIGDGTSEGLPPGWGNNELQYYTEDNITVEDGNLVIEAR---VGDSPDPNFNFTSGRIRTQGLFDFTYGRIEASIQVPEGLGLWAAFWMLGSDP--SPFGAWAAR-GEIDIMESFGQETQFAQGTAHFGMVFPLNEN 196
BLAST of mRNA_P-wetherbeei_contig15476.1.1 vs. uniprot
Match: A0A2E2ESX3_9FLAO (Laminarinase n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E2ESX3_9FLAO) HSP 1 Score: 95.5 bits (236), Expect = 4.490e-20 Identity = 50/145 (34.48%), Postives = 71/145 (48.97%), Query Frame = 1
Query: 1 FDGTELDASIWEHQLGDGCPDLCRWGTGQLQSFAKENALVADDQFRIEARSDKAADSPKCTSARVRTLGKRDFMSGMISARISFPSDDGMWPIFQLLPSDPDASGYGSWAARYGSVDMFE-TRNNGEIVRYMLHFGGAYPNQQNS 432
F GT L+ SIW ++LGDGCP+LC WG + Q + KEN V D I A D S S R+ T K +F G I A++ P G+WP F +L S+ G+ + G +D+ E + LH +Y +N+
Sbjct: 30 FSGTSLNTSIWNYELGDGCPNLCGWGNNERQVYTKENVQVKDGSLIITATKD----STSYFSGRITTKNKFEFQYGTIEAKMKLPEGSGLWPAFWMLGSNISEVGW----PKSGEIDIMEYVGKKPHEIHTTLHTQDSYGQSKNT 166
BLAST of mRNA_P-wetherbeei_contig15476.1.1 vs. uniprot
Match: A0A7Y1VUG1_9BACT (Family 16 glycosylhydrolase n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7Y1VUG1_9BACT) HSP 1 Score: 98.6 bits (244), Expect = 6.060e-20 Identity = 54/146 (36.99%), Postives = 79/146 (54.11%), Query Frame = 1
Query: 1 FDGTELDASIWEHQLGDGCP-DLCRWGTGQLQSFAKENALVADDQFRIEARSDKAADSPKCTSARVRTLGKRDFMSGMISARISFPSDDGMWPIFQLLPSDPDASGYGSWAARYGSVDMFET-RNNGEIVRYMLHFGGAYPNQQNS 432
FDG+ LD + W QLGDGC +C WG +LQ + +EN V+D +I A+ + + TSAR+ + GK D+ G AR+ PS GMWP F +L S YG W + G +D+ E + + V +HFG PN +++
Sbjct: 29 FDGSALDMTKWNIQLGDGCDLGICGWGNNELQFYQQENVEVSDGTLKIIAKRESVGNKAY-TSARITSKGKGDWTFGRFEARLKTPSGKGMWPAFWMLSSTEP---YGGWP-QSGEIDIMELIGSEPDQVHGTIHFGSPAPNNRSA 169
BLAST of mRNA_P-wetherbeei_contig15476.1.1 vs. uniprot
Match: UPI001074E6C8 (glycoside hydrolase family 16 protein n=2 Tax=Flavobacterium TaxID=237 RepID=UPI001074E6C8) HSP 1 Score: 94.4 bits (233), Expect = 1.170e-19 Identity = 50/147 (34.01%), Postives = 76/147 (51.70%), Query Frame = 1
Query: 1 FDGTELDASIWEHQLGDGCPDLCRWGTGQLQSFAKENALVADDQFRIEARSDKAADSPKCTSARVRTLGKRDFMSGMISARISFPSDDGMWPIFQLLPSDPDASGYGSWAARYGSVDMFE-TRNNGEIVRYMLHFGGAYPNQQNSNQ 438
F+ L+ S W H+LGDGCPDLC WG + Q + K N D + IEAR + K TS ++ T GK++F+ G I A+ P G+WP F +L ++ D W + G +D+ E + +V LH ++ N N+ +
Sbjct: 29 FNKKTLNESFWNHELGDGCPDLCGWGNNERQIYTKNNHEFKDGKLIIEARKE----GEKYTSTKITTKGKKEFLYGRIEAKAKLPVGHGLWPAFWMLGANIDEV---KWP-KTGEIDILEYIGRDPHMVYTTLHTQDSHGNTINTKR 167 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15476.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15476.1.1 >prot_P-wetherbeei_contig15476.1.1 ID=prot_P-wetherbeei_contig15476.1.1|Name=mRNA_P-wetherbeei_contig15476.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp MSGMISARISFPSDDGMWPIFQLLPSDPDASGYGSWAARYGSVDMFETRNback to top mRNA from alignment at P-wetherbeei_contig15476:223..1221+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15476.1.1 ID=mRNA_P-wetherbeei_contig15476.1.1|Name=mRNA_P-wetherbeei_contig15476.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=999bp|location=Sequence derived from alignment at P-wetherbeei_contig15476:223..1221+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15476:223..1221+ >mRNA_P-wetherbeei_contig15476.1.1 ID=mRNA_P-wetherbeei_contig15476.1.1|Name=mRNA_P-wetherbeei_contig15476.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig15476:223..1221+ (Phaeothamnion wetherbeei SAG_119_79)back to top |