mRNA_P-wetherbeei_contig1532.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1532.3.2
Unique NamemRNA_P-wetherbeei_contig1532.3.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1532.3.2 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 1.920e-51
Identity = 98/177 (55.37%), Postives = 130/177 (73.45%), Query Frame = 2
Query:  362 ARMAMSGLDYAESIEGAPFGDGVIWDPLGFAAKASAADVKKYREAELKHGRVAMLAALGIITAEVFHPLFIGDEYIGAAIYHFQEIEARVPIFWVLTILAIGIVEGETITRGWEKVDGVTGAGDLKDDYVNGDLGFDPLGLGTADKFE--EYRTKEVSQEHTDSMIGSIGMIVQELV 886
            ARM+ +G DY  ++ GAPF DG +WDP+G +++A   D+KK+REAE+KHGRVAMLA++G++ AE FHPLF+G +YIG AI+HF+EI AR P FW LT+LAI  +E   I  G+ ++D VTG G ++ DYV GDLGFDPLGL   D+ E    +TKE++     +MIG  GMIVQELV
Sbjct:   90 ARMS-AGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRL-AMIGITGMIVQELV 264          
BLAST of mRNA_P-wetherbeei_contig1532.3.2 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 3.010e-50
Identity = 105/213 (49.30%), Postives = 135/213 (63.38%), Query Frame = 2
Query:  296 AAFVTPSLVAKVGGKTLAAKRPARMAMSGLDYAESIEGAPFG---DGVIWDPLGFAAKASAADVKKYREAELKHGRVAMLAALGIITAEVFHPLFIGDEYIGAAIYHFQEIEARVPIFWVLTILAIGIVEGETITRGWEKVDGVTGAGDLKDDYVNGDLGFDPLGLGTADKFEEYRTKEVSQEHTD----SMIGSIGMIVQELVDSKGILEHF 913
            AAFV P    +     +AA    +M  +G DYA S+ GAPFG   +G  +DP G A       +KK+REAELKHGRV+MLAA+GI+ +EVFHPLF+G  YIG A+ H Q+I    P+FWV ++  I  +EG+TI   W  V  VTG G+LK +Y  GDLGFDPLGL   D  E++R   +  +  D    +MIG +GMIVQE+VD KGILEH 
Sbjct:   19 AAFVAPIAAPRSSIARVAASSTPKMT-AGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDG-EDFRL--IQSQELDLGRYAMIGVLGMIVQEVVDGKGILEHI 227          
BLAST of mRNA_P-wetherbeei_contig1532.3.2 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 2.140e-49
Identity = 100/204 (49.02%), Postives = 132/204 (64.71%), Query Frame = 2
Query:  299 AFVTPSLVAKVGGKTLAAKRPARMAMSGLDYAESIEGAPFGDGVIWDPLGFAAKASAADVKKYREAELKHGRVAMLAALGIITAEVFHPLFIGDEYIGAAIYHFQEIEARVPIFWVLTILAIGIVEGETITRGWEKVDGVTGAGDLKDDYVNGDLGFDPLGLGTADK--FEEYRTKEVSQEHTDSMIGSIGMIVQELVDSKGIL 904
            AFV P  V        A+   A    +G DY  ++ GAPFGDG I+DPL  +  A  AD+KK+REAE+KHGRVAMLA+LG++ AE +HPLF+G +YIG A+ HFQEI A+ P FWV ++L +  +E  TI   +E    VTG G LK+DYV GDLGFDPL L   D+   +  +TKE++     +MIG  GM+VQEL++   IL
Sbjct:   20 AFVAPMAVRSAAP---ASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRL-AMIGIAGMLVQELINPADIL 219          
BLAST of mRNA_P-wetherbeei_contig1532.3.2 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 6.340e-47
Identity = 98/208 (47.12%), Postives = 133/208 (63.94%), Query Frame = 2
Query:  299 AFVTPSLVAKVGGKTLAAKRPARMAMSGLDYAESIEGAPFGDGVIWDPLGFAAKASAADVKKYREAELKHGRVAMLAALGIITAEVFHPLFIGDEYIGAAIYHFQEIEARVPIFWVLTILAIGIVEGETITRGWEKVDGVTGAGDLKDDYVNGDLGFDPLGL---GTADKFEEYRTKEVSQEHTDSMIGSIGMIVQELVDSKGILEHF 913
            AFV P  V      + A+   A    +G DY  ++ GAPF DG I+DPL  +  A+  D+KK+REAE+KHGRVAMLA+LGI+ AE +HPLF+G ++IG AI HFQEI A+ P FW  ++L +  +E  TI   ++    VTG G LK+DY+ GDLGFDPL L   G A   +  +TKE++     +MIG  GM+ QELV+ + IL +F
Sbjct:   20 AFVAPVAVRSAAPASAAS---ALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEA-ALDVMKTKELNNGRL-AMIGIAGMLAQELVNGQDILPNF 222          
BLAST of mRNA_P-wetherbeei_contig1532.3.2 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 2.960e-46
Identity = 96/204 (47.06%), Postives = 131/204 (64.22%), Query Frame = 2
Query:  299 AFVTPSLVAKVGGKTLAAKRPARMAMSGLDYAESIEGAPFGDGVIWDPLGFAAKASAADVKKYREAELKHGRVAMLAALGIITAEVFHPLFIGDEYIGAAIYHFQEIEARVPIFWVLTILAIGIVEGETITRGWEKVDGVTGAGDLKDDYVNGDLGFDPLGLGTADK--FEEYRTKEVSQEHTDSMIGSIGMIVQELVDSKGIL 904
            AFV P  V      + A+   A    +G DY  ++ GAPFGDG I+DPL  +  A   ++K +REAE+KHGRVAMLA +G+I AE +HPLF+G +YIG A+ HFQEI A+ P FW  ++L +  +E  TIT+ + +   VTG G L+D+Y  GDLGFDPL L   D+   E+ +TKE++     +MIG  GM+VQELV+   IL
Sbjct:   21 AFVAPMAVRSAAPASSAS---ALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRL-AMIGIAGMLVQELVNPADIL 220          
BLAST of mRNA_P-wetherbeei_contig1532.3.2 vs. uniprot
Match: A0A836CGF9_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGF9_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.060e-42
Identity = 94/198 (47.47%), Postives = 123/198 (62.12%), Query Frame = 2
Query:  335 GKTLAAKRPARMAMSGLDYAESIEGAPFG-DGVIWDPLGFAAKASAADVKKYREAELKHGRVAMLAALGIITAEVFHPLFIGDEYIGAAIYHFQEIEARVPIFWVLTILAIGIVEGETITRGWEKVDGVT-GAGDLKDDYVNGDLGFDPLGLGTAD---KFEEYRTKEVSQEHTDSMIGSIGMIVQELVDSKGILEHF 913
            GK L A+     A+   D A ++ G PFG +G ++DPLG A+K S  ++K+Y+E ELKHGRVAMLA LG + AEVFHPLF     IG +I HFQ IE  VP FW+L +  IG+ E + I RGW K D +  G   LKD+Y+ GD GFDPL LG      KFE  R KE++     +M   +G+  QELV+ KG+ E+ 
Sbjct:   15 GKALQARPTTSSALKMAD-ASALIGKPFGAEGPVFDPLGLASKVSDIELKRYQECELKHGRVAMLAVLGSLVAEVFHPLFPMSFEIGPSIRHFQIIEREVPYFWILAMFGIGVFEADNIYRGWVKQDPIRDGIASLKDNYIVGDFGFDPLNLGPTSEPQKFELMRAKELNNGRL-AMFAILGIWAQELVNGKGVFENI 210          
BLAST of mRNA_P-wetherbeei_contig1532.3.2 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 5.040e-42
Identity = 82/164 (50.00%), Postives = 112/164 (68.29%), Query Frame = 2
Query:  431 IWDPLGFAAKASAADVKKYREAELKHGRVAMLAALGIITAEVFHPLFIGDEYIGAAIYHFQEIEARVPIFWVLTILAIGIVEGETITRGWEKVDGVTGAGDLKDDYVNGDLGFDPLGLGTADK--FEEYRTKEVSQEHTDSMIGSIGMIVQELVDSKGILEHFN 916
            I+DPLG A  A   D+K +REAE+KHGRVAMLA+LG++ AE +HP F+G +YIG A+ HFQEI AR P FW  ++LA+ ++E  TIT+ + +   VTG G L+D+Y  GDLGFDPL L   D+   E  +TKE++     +MIG  G +VQELV+   IL+  +
Sbjct:   16 IFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRL-AMIGIAGTLVQELVNPTNILDFLH 178          
BLAST of mRNA_P-wetherbeei_contig1532.3.2 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 1.590e-40
Identity = 81/160 (50.62%), Postives = 109/160 (68.12%), Query Frame = 2
Query:  431 IWDPLGFAAKASAADVKKYREAELKHGRVAMLAALGIITAEVFHPLFIGDEYIGAAIYHFQEIEARVPIFWVLTILAIGIVEGETITRGWEKVDGVTGAGDLKDDYVNGDLGFDPLGLGTADK--FEEYRTKEVSQEHTDSMIGSIGMIVQELVDSKGIL 904
            I+DPLG +  A+  D+KK+REAE+KHGRVAMLA+LG+I AE +HP F+G +YIG A+ HFQEI A+ P FW  ++L +  VE  TI   ++    VTG G LK+DY+ GDLGFDPL L   D+   +  +TKE++     +MIG  GM+ QELV+   IL
Sbjct:   37 IFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRL-AMIGIAGMLAQELVNPADIL 195          
BLAST of mRNA_P-wetherbeei_contig1532.3.2 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 1.440e-38
Identity = 88/205 (42.93%), Postives = 127/205 (61.95%), Query Frame = 2
Query:  296 AAFVTPSLVAKVGGKTLAAKRPARMAMSGLDYAESIEGAPFGDGVIWDPLGFAAKASAADVKKYREAELKHGRVAMLAALGIITAEVFHPLFIGDEYIGAAIYHFQEIEARVPIFWVLTILAIGIVEGETITRGWEKVDGVTGAGDLKDDYVNGDLGFDPLGLGTADK--FEEYRTKEVSQEHTDSMIGSIGMIVQELVDSKGIL 904
            AAFVTP  V      + A+   A    +G DY  ++ GA   +G I+D L  A  A   ++K +REAE+KHGRVAMLA +G++ AE +HP F+G +YIG A+ HFQEI A+ P FW  ++L +  +E  TI + + +   VTG G L+D+Y  GDLGFDP  +   D+   E+ + KE++     +MIG +GM+VQELV+ + IL
Sbjct:   20 AAFVTPMAVRSAAPASSAS---ALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRL-AMIGIVGMLVQELVNGQDIL 217          
BLAST of mRNA_P-wetherbeei_contig1532.3.2 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 6.420e-38
Identity = 80/160 (50.00%), Postives = 109/160 (68.12%), Query Frame = 2
Query:  431 IWDPLGFAAKASAADVKKYREAELKHGRVAMLAALGIITAEVFHPLFIGDEYIGAAIYHFQEIEARVPIFWVLTILAIGIVEGETITRGWEKVDGVTGAGDLKDDYVNGDLGFDPLGLGTADK--FEEYRTKEVSQEHTDSMIGSIGMIVQELVDSKGIL 904
            I+DPLG +  A+  D+KK+REAE+KHGRVAMLA+LG+I AE +HP F+G +YIG A+ HFQEI A+ P FW  ++L +  +E  TI   ++    VTG G LK+DY+ GDLGFDPL L   D+   +  +TKE++     +MIG  GM+ QELV+   IL
Sbjct:  233 IFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRL-AMIGIAGMLAQELVNPADIL 391          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1532.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5B4_ECTSI1.920e-5155.37Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FQG7_ECTSI3.010e-5049.30Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7Q6_ECTSI2.140e-4949.02Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI6.340e-4747.12Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI2.960e-4647.06Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A836CGF9_9STRA1.060e-4247.47Light harvesting complex protein n=1 Tax=Tribonema... [more]
D7G7Q7_ECTSI5.040e-4250.00Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7S5_ECTSI1.590e-4050.63Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7S0_ECTSI1.440e-3842.93Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE6.420e-3850.00LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1532contigP-wetherbeei_contig1532:3600..6977 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G5B4
PFAMsChloroa_b-bind
Model size2031
Max annot lvl2759|Eukaryota
KEGG koko:K08914
KEGG Pathwayko00196,ko01100,map00196,map01100
Hectar predicted targeting categorychloroplast
Exons6
Evalue5.47e-57
EggNOG OGs2BEWM@1|root,2S15M@2759|Eukaryota
DescriptionChlorophyll A-B binding protein
Cds size678
COG categoryU
BRITEko00000,ko00001,ko00194
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1532.3.2prot_P-wetherbeei_contig1532.3.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1532 3856..5880 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186052.3012705-UTR-P-wetherbeei_contig1532:3599..38551683186052.3012705-UTR-P-wetherbeei_contig1532:3599..3855Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1532 3600..3855 +
1683186052.360931-UTR-P-wetherbeei_contig1532:5880..69771683186052.360931-UTR-P-wetherbeei_contig1532:5880..6977Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1532 5881..6977 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186052.3112218-CDS-P-wetherbeei_contig1532:3855..40801683186052.3112218-CDS-P-wetherbeei_contig1532:3855..4080Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1532 3856..4080 +
1683186052.319397-CDS-P-wetherbeei_contig1532:4300..43321683186052.319397-CDS-P-wetherbeei_contig1532:4300..4332Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1532 4301..4332 +
1683186052.327341-CDS-P-wetherbeei_contig1532:4557..45971683186052.327341-CDS-P-wetherbeei_contig1532:4557..4597Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1532 4558..4597 +
1683186052.3372216-CDS-P-wetherbeei_contig1532:4717..48701683186052.3372216-CDS-P-wetherbeei_contig1532:4717..4870Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1532 4718..4870 +
1683186052.3452437-CDS-P-wetherbeei_contig1532:5142..52811683186052.3452437-CDS-P-wetherbeei_contig1532:5142..5281Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1532 5143..5281 +
1683186052.3532596-CDS-P-wetherbeei_contig1532:5791..58801683186052.3532596-CDS-P-wetherbeei_contig1532:5791..5880Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1532 5792..5880 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1532.3.2

>prot_P-wetherbeei_contig1532.3.2 ID=prot_P-wetherbeei_contig1532.3.2|Name=mRNA_P-wetherbeei_contig1532.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=226bp
MKAAMMIAALPTVAAFVTPSLVAKVGGKTLAAKRPARMAMSGLDYAESIE
GAPFGDGVIWDPLGFAAKASAADVKKYREAELKHGRVAMLAALGIITAEV
FHPLFIGDEYIGAAIYHFQEIEARVPIFWVLTILAIGIVEGETITRGWEK
VDGVTGAGDLKDDYVNGDLGFDPLGLGTADKFEEYRTKEVSQEHTDSMIG
SIGMIVQELVDSKGILEHFNPTIPP*
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mRNA from alignment at P-wetherbeei_contig1532:3600..6977+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1532.3.2 ID=mRNA_P-wetherbeei_contig1532.3.2|Name=mRNA_P-wetherbeei_contig1532.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3378bp|location=Sequence derived from alignment at P-wetherbeei_contig1532:3600..6977+ (Phaeothamnion wetherbeei SAG_119_79)
CTGAGGTGGCCGGGGAAAACATGCCGCCGAAACCGGTTTCTGGGGAGGCC GCGGGCCGGCGGCGGGGCGAGCCTCGCAGAGAGCGGCTGCACAGCCACCC CCGCCTTCTATCCTAGGTTCAATAGAACCCTCCGAACCTGCAGTAGACAC GCACTGAGGAAAGAACAGAAAAATCTCTGTGTCAGTCGAACAGTCGTAAG CACATTCACAGCTCTTCCCACCAGACCAGTCTGCAAACCAGCAACCAACA GCAACCATGAAGGCCGCCATGATGATCGCCGCTCTGCCCACCGTGGCCGC GTTCGTGACGCCATCGCTCGTCGCCAAGGTCGGCGGCAAGACCCTCGCCG CCAAGCGGCCCGCCCGCATGGCCATGAGCGGGCTCGATTACGCCGAGTCC ATCGAGGGCGCCCCCTTCGGCGACGGCGTAATCTGGGACCCGCTCGGCTT CGCGGCCAAAGCTTCCGCCGCTGACGTGAAGGCAAGTGTTGGGCTTCGCG GTGCATTTTCGGCATTGCGTACGCACTTCCCTTTCACCGTTTGCTTTACT TCGTGCCGGCGGCGCAATTGCGCTCTGTTTTCGCGCTGTGAATGCCTCAT GTGCTGGTTTGGATTCGATCTAAGCGTTCAGCACCCGTCGAGCACCTCTG ACGTCGAATCTACGCCCCGCTCTGAACCTTCTTCTTCCTCGACCTCAACA GAAGTACCGCGAGGCCGAGCTGAAGCACGGCCGGTGAGCGCCTCCGCCCA TCCTAACCTCGCCGTTTGGGCGCCACATTTTTCAAACGGCCAACTAGTCT CCGCGGCGTGACGCGTCCCTTTCGAGCTTTCATTCAGCGTTCTCCTCTCT TGCTTTTCCGAGGTCTCTTGCATCGGTGCGCTTTTGCGTTTGCTCTTCTG ACCGCGTTCCTCGGTACGCTTCGCTACGCTGTCCTCGACTGCCCTCTGCC GCTTGCAGCGTGGCCATGCTCGCGGCGCTTGGCATTATCACCGCCGAGGT AAGCTTACGCTTAAGAGGAGGATGGATTTTCCAGTGACGCGCAGCGTTCC GGCAACCAAAGCCTCTCTAACCCAATCGTCCATTCGCCGCACCCATCGCA TCTTTTCAAGTAAAACAGGTGTTCCATCCGCTGTTCATCGGCGACGAGTA CATAGGCGCGGCCATCTACCACTTCCAGGAGATCGAGGCGCGCGTGCCCA TCTTCTGGGTGCTGACCATCCTTGCCATTGGCATTGTCGAGGGCGAGACC ATCACCCGCGGCTGGGAGAAGGTAAGGCGGAACCGATCGCCGTGAGTGCC GCTCGCAAAGAAACCACGCTTGGCTTCGTATTTTGGCGGCGCACGTGACG CCTCGGTCTTGTGATCACTCTGGAGCGAAGGTGGCTGTGACCGTTATTGC AGTGCGGGATGGTGCTTTCAAAGCTCTTAAGCGTATTTGCCGCGATAAAT TTCCTCCTGCCCTCCGCCTCATATTCTAACGTTTTTCGTCGTGCTCTCTG CTGCCCTTTCTCGCCATTCTTCCCTTTCCTGCCCGTCGATCAGGTCGACG GCGTGACGGGCGCAGGCGACCTGAAGGACGACTACGTCAACGGCGACCTC GGCTTCGACCCCCTCGGCCTCGGCACTGCCGACAAATTCGAGGAGTACCG AACCAAGGAGGTGAGCCAGGAGCATACGGACTGTTCCTCGTCATGACGAA ACAAGATCAAAAGTGTGATTTACAAGAAGCATGATGGTTATGCGTTGCAG CGAACCTGGCAGAAGCCTTGGACGCGTTGCGCGAGTCGTGCTGATTTCTG CGGCTGCTTGAGCCTGCATTTATATTAGGTGGTGGTATGTGTCAAAACTT TGGCCGTGCAGCTTTGTCTGTAGCCAGCTGGCCACGATTGAATTGCTGTC GCTCCGCTCCCTCCGCCACTGCCGCCGTTTCTTCTGTCATCTGCAGCTCA ACAACGGACGGCTTGGTGAGTATCTGTCTCTCCTATCTTCTGTTCTTGCT CCTTCCTGTTGGGGAGGCGTGACGTTCTGCGAGGGGAAGAGGTCGATTTA ATCGAGAATTAACCGGTGTTCGGTACGCGTTTTGTGTTAAACGTGTTGCC TCATGTGGAAGGAAATGAAGCCGCGCGGCACTTAACGTCCTACGTCGCTC TTTACCCTTGTTCCACCTCCTGCTCTTGCCCTCCATGCTCAGCCATGATC GGCTCGATAGGCATGATCGTGCAGGAGCTGGTGGACTCGAAGGGCATCCT GGAGCATTTCAACCCCACCATCCCCCCGTAAACTGGGAAGCCAACACCCG AGTTCTCGATGCGACGTCGCTTCTTCGCAAAAGACTGACGCCGCGCCGTC GACAAGCCGCAACCGCAATTTTTGAAACCGTTTGTTTTCGGAAGAGAGAA GTTGGATGAGGGCGGTGAGGTATGTCGGCTGGTGGACAGGGTCTTCCCTT CGGCAGGAAGCGGCCTTGCGTCGAAAGGCGGCGCCTCTGAGGACGGGATG GTAGAGGCACCCCAGTCCCTTTGAAAGCGCCGCGCGCGTGGTTGATAGTG GGGGAGAGGGTTTCTCGGTACGACCGTCGTGGCGATAGACTGGCTGGCAA AGTAGGGAGGAAAGGACAAGACGGTTGGTTATGTGGAGAGATCCTCGCGC GCGCGTATAGAGGCACGAGCATTGAAGACAGAGAGGTCGGGATTCGGGGC GCTGCGCAGGAGAGAATTTTGATTTGGGACGCGTCAGAGTTATGGCTGCT AGCTTGGGCCGGGCCCATTCGAGTTGCATGTTGGGGCTCCAGCGGGTAGT GCGGCGAGTGGTGCTGGCTACTAACTAGTTGCTGCGTCGACAGTGCAGAA AACAAAACAACATTATGCCCTTGCGGCGATGGAATGAAAAAGAAGAAACA ATCGGACAAGTTGGCAGTCGTTTGGTGTTCTGTGTAAGCTCCGGCATTTG GTGCTGGTGAAGGAAATTTAGACAAGCAGACCATGTGGCCCGATGTTTCT CCCATACCTTTGACTCACCCGGCTATAGCGACGTGAAGCAGCATGTTTCC ATCGGCTCGTCACCGCAGTCGACCCATGCCATTTGGTTACGGCCTTGCGG GCGCTGCGCGGGGTAGGGCCAGGGGGATGATGCCAGCATATTCTTTGGAA TATTGTGGGTGAATGGTTCCTCCGAGCAGTAAAGCATATTGAATATGCAC GTGAGCATATTGTGGGCTTCTCAGGGGAAAAACCTGCCGCGCGGGAAACC GCGCGGTACGGCGTGGCAAAGATCTTCAAATCACAGCATTTTGTATAGAG AAAATGGGAGGGGACGGGCCGTGCCGGGGCGCGGCAAAGATCTTCAAATC ACAGCATTTTGTATAGAGAAAATGGGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1532:3600..6977+

>mRNA_P-wetherbeei_contig1532.3.2 ID=mRNA_P-wetherbeei_contig1532.3.2|Name=mRNA_P-wetherbeei_contig1532.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig1532:3600..6977+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGCCGCCATGATGATCGCCGCTCTGCCCACCGTGGCCGCGTTCGT
GACGCCATCGCTCGTCGCCAAGGTCGGCGGCAAGACCCTCGCCGCCAAGC
GGCCCGCCCGCATGGCCATGAGCGGGCTCGATTACGCCGAGTCCATCGAG
GGCGCCCCCTTCGGCGACGGCGTAATCTGGGACCCGCTCGGCTTCGCGGC
CAAAGCTTCCGCCGCTGACGTGAAGAAGTACCGCGAGGCCGAGCTGAAGC
ACGGCCGCGTGGCCATGCTCGCGGCGCTTGGCATTATCACCGCCGAGGTG
TTCCATCCGCTGTTCATCGGCGACGAGTACATAGGCGCGGCCATCTACCA
CTTCCAGGAGATCGAGGCGCGCGTGCCCATCTTCTGGGTGCTGACCATCC
TTGCCATTGGCATTGTCGAGGGCGAGACCATCACCCGCGGCTGGGAGAAG
GTCGACGGCGTGACGGGCGCAGGCGACCTGAAGGACGACTACGTCAACGG
CGACCTCGGCTTCGACCCCCTCGGCCTCGGCACTGCCGACAAATTCGAGG
AGTACCGAACCAAGGAGGTGAGCCAGGAGCATACGGACTCCATGATCGGC
TCGATAGGCATGATCGTGCAGGAGCTGGTGGACTCGAAGGGCATCCTGGA
GCATTTCAACCCCACCATCCCCCCGTAA
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