mRNA_P-wetherbeei_contig1525.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1525.1.1 vs. uniprot
Match: A0A482RS68_9ARCH (WW domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RS68_9ARCH) HSP 1 Score: 77.8 bits (190), Expect = 7.260e-15 Identity = 30/80 (37.50%), Postives = 50/80 (62.50%), Query Frame = 1
Query: 19 HWWNAVTQQ---SSPVQPLAHKRGLVGSRVLVYWPAEGTSFSGVLTRFNARRGKHRVEYDDGEHEWIELEEQQVRLPFSV 249
+W N +T + P +PLAH+ G++ RV V+W + + G +TR++ R+ +HRVEYDDG+HEW+ L+ + R+
Sbjct: 676 YWQNHITNEITFDEPSKPLAHELGMLSKRVRVFWVVQNAWYEGTVTRYHKRKNRHRVEYDDGDHEWMNLDNEAERIQVQA 755
BLAST of mRNA_P-wetherbeei_contig1525.1.1 vs. uniprot
Match: A0A7S3HAT1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAT1_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 1.190e-13 Identity = 30/76 (39.47%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 19 HWWNAVTQ---QSSPVQPLAHKRGLVGSRVLVYWPAEGTSFSGVLTRFNARRGKHRVEYDDGEHEWIELEEQQVRL 237
+W N T P + LAH++ LV +R+ VYW + + G++T+++ R+ +HRVEYDDG+HEWI L+++ R+
Sbjct: 460 YWQNFATNVITYDEPEEELAHEKNLVNTRIKVYWVVQDCWYGGIITKYHRRKRRHRVEYDDGDHEWINLQDECDRV 535
BLAST of mRNA_P-wetherbeei_contig1525.1.1 vs. uniprot
Match: K3WKC7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKC7_GLOUD) HSP 1 Score: 70.5 bits (171), Expect = 2.710e-12 Identity = 30/72 (41.67%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 1 DTTGESHWWNAVTQQSSPVQPL--AHKRGLVGSRVLVYWPAEGTSFSGVLTRFNARRGKHRVEYDDGEHEWI 210
D G+ W++ +Q ++P AH+R ++G + V+WP E F+GV+TR+N + KHRVEY+DG+HEW+
Sbjct: 752 DEYGDQFWFSPSRKQRLYMRPNDNAHERTMLGMQCRVFWPLEQQWFNGVITRYNRVKSKHRVEYEDGDHEWL 823
BLAST of mRNA_P-wetherbeei_contig1525.1.1 vs. uniprot
Match: A0A699YUQ4_HAELA (DNA mismatch repair protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YUQ4_HAELA) HSP 1 Score: 63.5 bits (153), Expect = 1.770e-11 Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 82 LVGSRVLVYWPAEGTSFSGVLTRFNARRGKHRVEYDDGEHEWIELEEQQVRL 237
+VG R+ V+WP EGT F G ++R++ +GKHRV YDDG+ EW+ L +Q L
Sbjct: 24 VVGRRIKVFWPQEGTWFEGSISRYDQDKGKHRVCYDDGDKEWVVLSAEQYEL 75
BLAST of mRNA_P-wetherbeei_contig1525.1.1 vs. uniprot
Match: A0A8K1CJ04_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJ04_PYTOL) HSP 1 Score: 67.4 bits (163), Expect = 3.160e-11 Identity = 30/83 (36.14%), Postives = 50/83 (60.24%), Query Frame = 1
Query: 1 DTTGESHWWNAVTQQSSPVQP--LAHKRGLVGSRVLVYWPAEGTSFSGVLTRFNARRGKHRVEYDDGEHEW--IELEEQQVRL 237
D G W++ + V+P A+++ ++G V+WP E F+G +TR+N + KHR+EYDDG+HEW + +E +V+L
Sbjct: 188 DDNGHQFWFSPSRNERHYVRPNDFAYQKSMLGMYCRVFWPLEQQWFNGRITRYNHAKNKHRIEYDDGDHEWFCVHIEGDRVQL 270
BLAST of mRNA_P-wetherbeei_contig1525.1.1 vs. uniprot
Match: A0A5D6XXT6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXT6_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 3.290e-11 Identity = 29/81 (35.80%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 1 DTTGESHWWNAVTQQSSPVQPL--AHKRGLVGSRVLVYWPAEGTSFSGVLTRFNARRGKHRVEYDDGEHEWIELEEQQVRL 237
D +G W++ +Q V+P A ++ ++G VYWP E FSG ++++N + KHRVEYDDG+H+W++ + R+
Sbjct: 754 DESGGQFWFSPSRKQRQYVRPNDNALEKAMLGLYCRVYWPLEQQWFSGYVSKYNREKNKHRVEYDDGDHDWLDFRVEGARI 834
BLAST of mRNA_P-wetherbeei_contig1525.1.1 vs. uniprot
Match: A0A7S4EA95_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EA95_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 4.000e-10 Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 82 LVGSRVLVYWPAEGTSFSGVLTRFNARRGKHRVEYDDGEHEWIELEEQQVRL 237
L+G V V+WP E F GVL RF+ RR K+RVEY DG+HEWI+++E RL
Sbjct: 812 LIGCSVRVFWPLEEQWFEGVLARFHRRRRKYRVEYIDGDHEWIDVDEAADRL 863
BLAST of mRNA_P-wetherbeei_contig1525.1.1 vs. uniprot
Match: A0A7S4A0T5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0T5_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 4.020e-10 Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 82 LVGSRVLVYWPAEGTSFSGVLTRFNARRGKHRVEYDDGEHEWIELEEQQVRL 237
L+G V V+WP E F GVL RF+ RR K+RVEY DG+HEWI+++E RL
Sbjct: 812 LIGCSVRVFWPLEEQWFEGVLARFHRRRRKYRVEYIDGDHEWIDVDEAADRL 863
BLAST of mRNA_P-wetherbeei_contig1525.1.1 vs. uniprot
Match: A0A2D4BZ82_PYTIN (Transcription elongation factor SPT5, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZ82_PYTIN) HSP 1 Score: 63.2 bits (152), Expect = 1.040e-9 Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = 1
Query: 1 DTTGESHWWNAVTQQSSPVQPLAHK--RGLVGSRVLVYWPAEGTSFSGVLTRFNARRGKHRVEYDDGEHEWIEL 216
D G W++ + V+P H + L+G V+WP E F+G +TR+N + KHRV+YDDG+HEW+ +
Sbjct: 1539 DEQGYQFWFSPSRNERHYVRPNDHALAKSLLGMPCRVFWPLEQQWFTGRVTRYNHSKDKHRVDYDDGDHEWLRV 1612
BLAST of mRNA_P-wetherbeei_contig1525.1.1 vs. uniprot
Match: A0A662WGS7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGS7_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 3.550e-9 Identity = 27/74 (36.49%), Postives = 43/74 (58.11%), Query Frame = 1
Query: 1 DTTGESHWWNAVTQQSSPVQPLAHKR--GLVGSRVLVYWPAEGTSFSGVLTRFNARRGKHRVEYDDGEHEWIEL 216
D G+ W++ + V+P H R ++ V WP E F G +TR+N ++G+HRV+YDDG+HEW+ +
Sbjct: 756 DERGDQFWFSPSRNERLYVRPNDHAREKSVLQMPCRVLWPHEQRWFDGHVTRYNWKKGRHRVDYDDGDHEWLSI 829 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1525.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1525.1.1 >prot_P-wetherbeei_contig1525.1.1 ID=prot_P-wetherbeei_contig1525.1.1|Name=mRNA_P-wetherbeei_contig1525.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=84bp DTTGESHWWNAVTQQSSPVQPLAHKRGLVGSRVLVYWPAEGTSFSGVLTRback to top mRNA from alignment at P-wetherbeei_contig1525:418..933- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1525.1.1 ID=mRNA_P-wetherbeei_contig1525.1.1|Name=mRNA_P-wetherbeei_contig1525.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig1525:418..933- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1525:418..933- >mRNA_P-wetherbeei_contig1525.1.1 ID=mRNA_P-wetherbeei_contig1525.1.1|Name=mRNA_P-wetherbeei_contig1525.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=252bp|location=Sequence derived from alignment at P-wetherbeei_contig1525:418..933- (Phaeothamnion wetherbeei SAG_119_79)back to top |