mRNA_P-wetherbeei_contig1517.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1517.4.1 vs. uniprot
Match: A0A835YLN6_9STRA (HIT-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN6_9STRA) HSP 1 Score: 124 bits (311), Expect = 9.450e-32 Identity = 83/190 (43.68%), Postives = 106/190 (55.79%), Query Frame = 3
Query: 81 CSACAAEAPKYRCPACEARYCSVACCKRHKEG--GED----RPPCSGKRAAAEDKLALTRKRARATAAPAIP-----------------------KVAPAGNPLAQCLEEQEAEAWRLQPEQRGKLARCEWLKAALRDPKLQMLLREIDGADDNDAELRFARTNPQFAEFVDKMLLELGLLVRSGVGELE 563
C C KYRC C+ARYCSVAC K HK G GE+ RPPC+GKRA A D + A AAPA+ P + + +E+EA W+L R +L+ EWL+AALRDPKLQ L+ +IDGA + +AELRF RTNP+F+ +D++LLE+GLL RS G LE
Sbjct: 19 CHICNQAPSKYRCAGCDARYCSVACFKTHKAGSTGENGTPVRPPCTGKRARAGDDAG---RPAADNAAPAVRLQQXXXXXXXXXXXXXXXXXXXRSAVPVESVKKEAAQEEEA-GWQLTDAHRAQLSGSEWLRAALRDPKLQTLILQIDGARNREAELRFHRTNPEFSALMDRILLEMGLLNRSADGNLE 204
BLAST of mRNA_P-wetherbeei_contig1517.4.1 vs. uniprot
Match: A0A553MVG7_9TELE (Zinc finger HIT domain-containing protein 3 n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553MVG7_9TELE) HSP 1 Score: 75.9 bits (185), Expect = 8.570e-14 Identity = 53/147 (36.05%), Postives = 75/147 (51.02%), Query Frame = 3
Query: 81 CSACAAEAPKYRCPACEARYCSVACCKRHKEGGEDRPPCSGKRAAAEDKLALTRKRARATAAPAIPKVAPAGNP-LAQCLEEQEAEAWRLQPEQRGKLARCEWLKAALRDPKLQMLLREIDGADDNDAELRFARTNPQFAEFVDKML 518
CS C+ PKYRCP C RYCSV C +RHKE G RP + ++ +TAAP + A P + L ++E ++ R+ E+ +L E LK LR+P L+ L+ +D A+D +R A P F EF D+ L
Sbjct: 4 CSVCSEHVPKYRCPICRVRYCSVGCFRRHKEIGSCRP-------------VIEPEQVSSTAAP----IGRAEEPWTVEDLLDEEGQSDRVPLEKLQQLGHSEALKDLLRNPHLRRLVTSVDSAEDKARAMREAMQEPLFVEFADQCL 133
BLAST of mRNA_P-wetherbeei_contig1517.4.1 vs. uniprot
Match: UPI001560DB4C (zinc finger HIT domain-containing protein 3-like n=2 Tax=Acipenser ruthenus TaxID=7906 RepID=UPI001560DB4C) HSP 1 Score: 75.5 bits (184), Expect = 1.120e-13 Identity = 55/151 (36.42%), Postives = 79/151 (52.32%), Query Frame = 3
Query: 81 CSACAAEAPKYRCPACEARYCSVACCKRHKEGGEDRPPCSGKRAAAEDKLALTRKRARATAAPAIPKVAPAGNP-----LAQCLEEQEAEAWRLQPEQRGKLARCEWLKAALRDPKLQMLLREIDGADDNDAELRFARTNPQFAEFVDKML 518
CS C E PKYRCP C RYCS+ C K+HK+G C K+ +K + +PA+ + AG+ + LEE E E+ R+ +Q +L CE LKA L +P L+ LLR +D A+ ++ ++ A P F EF D+ L
Sbjct: 4 CSVCNEELPKYRCPGCLIRYCSLNCYKKHKDG------CIPKKD-------TEKKPEKPELSPALQGMRQAGSTERRWSVEDRLEEYE-ESDRVPLQQLARLGECEALKALLYNPHLRQLLRTVDKAEGKESTMKVAMQEPLFVEFADQCL 140
BLAST of mRNA_P-wetherbeei_contig1517.4.1 vs. uniprot
Match: H3BD28_LATCH (Zinc finger HIT domain-containing protein 3 n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3BD28_LATCH) HSP 1 Score: 70.9 bits (172), Expect = 6.880e-12 Identity = 58/151 (38.41%), Postives = 77/151 (50.99%), Query Frame = 3
Query: 81 CSACAAEAPKYRCPACEARYCSVACCKRHKEGGEDRPPCSGKRAAAEDKLALTRKRARATAAPAIPKVAPAGNP-----LAQCLEEQEAEAWRLQPEQRGKLARCEWLKAALRDPKLQMLLREIDGADDNDAELRFARTNPQFAEFVDKML 518
C CA EAPKYRCPAC RYCSV CCK+HKE C +E+ + T +P++ V A N + L+E E E+ R+ P Q+ KL E LK L +P L+ LL ID A+D + ++ P F EF D+ L
Sbjct: 4 CGICAGEAPKYRCPACRTRYCSVPCCKKHKES------CIP----SEEPVPAT---VTLHVSPSLRGVVQAENQGNSRSVDNLLDEDE-ESDRVCP-QKLKLLESEDLKDLLCNPHLRQLLLSIDQAEDKASVMKVTMQEPLFVEFADQCL 139
BLAST of mRNA_P-wetherbeei_contig1517.4.1 vs. uniprot
Match: A0A8C3ZTA1_9TELE (Zinc finger HIT domain-containing protein 3 n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZTA1_9TELE) HSP 1 Score: 70.5 bits (171), Expect = 7.850e-12 Identity = 54/158 (34.18%), Postives = 71/158 (44.94%), Query Frame = 3
Query: 81 CSACAAEAPKYRCPACEARYCSVACCKRHKE------------GGEDRPPCSGKRAAAEDKLALTRKRARATAAPAIPKVAPAGNPLAQCLEEQEAEAWRLQPEQRGKLARCEWLKAALRDPKLQMLLREIDGADDNDAELRFARTNPQFAEFVDKML 518
C+ C +APKYRCPAC+ RYCSV CCK+HKE E R PC+G AE+ LA+ A+P P + L E EA L+ L +P L+ LL +DGA + ++ A P F EF D+ L
Sbjct: 4 CAVCDQQAPKYRCPACQVRYCSVGCCKKHKEECKPQARPATAAAPEGRQPCAG----AEEPLAVHDLLNEDDQTDAVPL------PSLKQLGESEA------------------LRDLLLNPHLRRLLAAVDGAQNKAEAMKTAMQEPLFVEFADQCL 133
BLAST of mRNA_P-wetherbeei_contig1517.4.1 vs. uniprot
Match: A0A6P5A0L7_BRABE (Zinc finger HIT domain-containing protein 3 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5A0L7_BRABE) HSP 1 Score: 68.6 bits (166), Expect = 4.940e-11 Identity = 49/148 (33.11%), Postives = 73/148 (49.32%), Query Frame = 3
Query: 75 VKCSACAAEAPKYRCPACEARYCSVACCKRHKEGGEDRPPCSGKRAAAEDKLALTRKRARATAAPAIPKVAPAGNPLAQCLEEQEAEAWRLQPEQRGKLARCEWLKAALRDPKLQMLLREIDGADDNDAELRFARTNPQFAEFVDKML 518
V C C+ + PKYRCP CE RYCS+ C HKE G+R +KL R R + + A A + ++ E R+ ++ KL E L++ L +P LQ ++RE+D +DD + ++ A P F EF D+ L
Sbjct: 2 VTCEVCSEQPPKYRCPRCEVRYCSLTCFNLHKEN------TCGER----EKLVQERNRIQQSEAAAAEDAGAVAMEMWDDGMDEGDEEDRVPLDRLQKLQDSEELRSLLCNPHLQRMIREVDSSDDPEVSMQRAMQEPIFVEFADQCL 139
BLAST of mRNA_P-wetherbeei_contig1517.4.1 vs. uniprot
Match: UPI001B7F1F65 (zinc finger HIT domain-containing protein 3-like n=2 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7F1F65) HSP 1 Score: 68.2 bits (165), Expect = 7.970e-11 Identity = 50/146 (34.25%), Postives = 76/146 (52.05%), Query Frame = 3
Query: 81 CSACAAEAPKYRCPACEARYCSVACCKRHKEGGEDRPPCSGKRAAAEDKLALTRKRARATAAPAIPKVAPAGNPLAQCLEEQEAEAWRLQPEQRGKLARCEWLKAALRDPKLQMLLREIDGADDNDAELRFARTNPQFAEFVDKML 518
CS C PKYRCP C RYCS+ C K+HK+ E P ++ + +L+ T + R + + + LEE E E+ R+ +Q +L CE +KA L +P L+ LLR +D A+ ++ ++ A P F EF D+ L
Sbjct: 4 CSVCNEGLPKYRCPGCLIRYCSLNCYKKHKD--ECIPKKDNEKKTEQSELSPTLREMRQA------ESTESRWSVEDLLEEDE-ESDRVPLQQLARLGECEAVKALLYNPHLRQLLRTVDKAEGKESIMKEAMQEPLFVEFADQCL 140
BLAST of mRNA_P-wetherbeei_contig1517.4.1 vs. uniprot
Match: A0A3B3T878_9TELE (Zinc finger HIT domain-containing protein 3 n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3T878_9TELE) HSP 1 Score: 66.2 bits (160), Expect = 2.710e-10 Identity = 51/150 (34.00%), Postives = 74/150 (49.33%), Query Frame = 3
Query: 81 CSACAAEAPKYRCPACEARYCSVACCKRHKEGGEDRPPCSGKRAAAEDKLALTRKRARATAAPAIPKVAPA----GNPLAQCLEEQEAEAWRLQPEQRGKLARCEWLKAALRDPKLQMLLREIDGADDNDAELRFARTNPQFAEFVDKML 518
CS C+ PKYRCP C+ +YCSV C K+HK+G CS E+ L A+P+ G+ + L ++E E+ ++ E+ KL E LKA LR+ L+ LL +DGA+ ++ A P F EF D+ L
Sbjct: 4 CSVCSETVPKYRCPTCKIKYCSVICYKKHKDG------CSP----VEETLPA-----------ALPEPGGTWCRDGDWTVEDLVDEEDESDKVPLERLKKLGESEELKALLRNAHLRRLLLAVDGAESKADIMKVAMQEPLFVEFADQCL 132
BLAST of mRNA_P-wetherbeei_contig1517.4.1 vs. uniprot
Match: A0A0E9WHR7_ANGAN (Zinc finger HIT domain-containing protein 3 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=A0A0E9WHR7_ANGAN) HSP 1 Score: 65.9 bits (159), Expect = 4.400e-10 Identity = 47/146 (32.19%), Postives = 73/146 (50.00%), Query Frame = 3
Query: 81 CSACAAEAPKYRCPACEARYCSVACCKRHKEGGEDRPPCSGKRAAAEDKLALTRKRARATAAPAIPKVAPAGNPLAQCLEEQEAEAWRLQPEQRGKLARCEWLKAALRDPKLQMLLREIDGADDNDAELRFARTNPQFAEFVDKML 518
CS C+ PKY+CPAC+ RYCSV+C K HK+G C + A LA P G+ + L +++ ++ R+ ++ +L + L+A L +P L+ LL +D A+D A ++ A P F EF D+ L
Sbjct: 4 CSVCSEHVPKYKCPACKIRYCSVSCYKNHKDG------CLPVKQTASPALA-----------PDFKATHSGGDWSVEDLLDEDEQSDRVPLQKLKELGESKDLEALLCNPHLRQLLLTVDQAEDKAAIMKVAMQEPLFVEFADQCL 132
BLAST of mRNA_P-wetherbeei_contig1517.4.1 vs. uniprot
Match: A0A3Q1HKG2_ANATE (Zinc finger HIT domain-containing protein 3 n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A3Q1HKG2_ANATE) HSP 1 Score: 65.5 bits (158), Expect = 5.380e-10 Identity = 53/149 (35.57%), Postives = 73/149 (48.99%), Query Frame = 3
Query: 81 CSACAAEAPKYRCPACEARYCSVACCKRHKEGGEDRPPCSGKRAAAEDKLALTRKRARATAAPAIPKVAPAGNPLAQCLEE--QEAEAWRLQPEQRGKL-ARCEWLKAALRDPKLQMLLREIDGADDNDAELRFARTNPQFAEFVDKML 518
C+ C+ E PKYRCPAC+ RYCS+ C KRHKE PP K P +P+V N + +E+ E + P QR +L + + L+ L +P L+ LLR ID AD+ D ++ A P F EF D+ L
Sbjct: 4 CNVCSEETPKYRCPACKIRYCSLGCYKRHKE--TCLPPEQPK--------------------PTVPEVNDTLNTDSWTVEDLLHEDDIIDKVPLQRLQLLGQSKELRDILCNPHLRQLLRSIDSADNKDDAMKAAMQEPLFVEFSDQCL 130 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1517.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1517.4.1 >prot_P-wetherbeei_contig1517.4.1 ID=prot_P-wetherbeei_contig1517.4.1|Name=mRNA_P-wetherbeei_contig1517.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp MAPKQQTVKCSACAAEAPKYRCPACEARYCSVACCKRHKEGGEDRPPCSGback to top mRNA from alignment at P-wetherbeei_contig1517:5133..5804+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1517.4.1 ID=mRNA_P-wetherbeei_contig1517.4.1|Name=mRNA_P-wetherbeei_contig1517.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig1517:5133..5804+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1517:5133..5804+ >mRNA_P-wetherbeei_contig1517.4.1 ID=mRNA_P-wetherbeei_contig1517.4.1|Name=mRNA_P-wetherbeei_contig1517.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig1517:5133..5804+ (Phaeothamnion wetherbeei SAG_119_79)back to top |