mRNA_P-wetherbeei_contig15082.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15082.1.1 vs. uniprot
Match: A0A3C0TXK1_9PROT (Flagellar M-ring protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TXK1_9PROT) HSP 1 Score: 230 bits (586), Expect = 8.830e-70 Identity = 112/147 (76.19%), Postives = 136/147 (92.52%), Query Frame = 3
Query: 57 DGYLDLNGFTEFLRKLGAGRLMAMGVVTAGLIAFFAYMTMQFTTQPMSLLYADLDMTDSGEILSKLEAMNIPYQLQGDGSTILVPQDQARRLRMTLAEQGIPAGGTVGYEIFDKSDMLGQTSFAQNINQLRAMEGELALTIRSISSI 497
+G L LNGF EF RKLGAGRL+AMG+V+AGL+AFF+Y+ +QFT QPMSLL+++LDM DSGEI++KLE+M+IPYQLQGDG TILVP+D+ARRLRM LAEQ +P+GG+VGYEIFDKS++LGQTSFAQNINQLRAMEGELA TI+SIS+I
Sbjct: 20 NGTLILNGFLEFFRKLGAGRLIAMGIVSAGLLAFFSYLVLQFTAQPMSLLFSNLDMNDSGEIIAKLESMDIPYQLQGDGGTILVPRDEARRLRMLLAEQNLPSGGSVGYEIFDKSEILGQTSFAQNINQLRAMEGELARTIQSISTI 166
BLAST of mRNA_P-wetherbeei_contig15082.1.1 vs. uniprot
Match: A0A352KCZ9_9PROT (Flagellar M-ring protein n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KCZ9_9PROT) HSP 1 Score: 204 bits (519), Expect = 4.520e-60 Identity = 99/142 (69.72%), Postives = 121/142 (85.21%), Query Frame = 3
Query: 72 LNGFTEFLRKLGAGRLMAMGVVTAGLIAFFAYMTMQFTTQPMSLLYADLDMTDSGEILSKLEAMNIPYQLQGDGSTILVPQDQARRLRMTLAEQGIPAGGTVGYEIFDKSDMLGQTSFAQNINQLRAMEGELALTIRSISSI 497
++GF EFL KLGAGRL+AMG+VTA L+AFF +M M+FT M+LLY++LD +DSGEI++KLEA+NIPYQLQGDG+TILVP +QARRLRM LAE G+P+G GYE+FD S LGQTSF QNIN++RAMEGELA TIRSI S+
Sbjct: 1 MSGFLEFLGKLGAGRLIAMGIVTAALVAFFIFMAMRFTAPSMALLYSNLDSSDSGEIIAKLEALNIPYQLQGDGTTILVPDEQARRLRMLLAEAGLPSGDNAGYELFDNSSTLGQTSFIQNINRMRAMEGELARTIRSIDSV 142
BLAST of mRNA_P-wetherbeei_contig15082.1.1 vs. uniprot
Match: A0A2A5EJ86_9HYPH (Flagellar M-ring protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5EJ86_9HYPH) HSP 1 Score: 179 bits (455), Expect = 9.090e-51 Identity = 85/142 (59.86%), Postives = 114/142 (80.28%), Query Frame = 3
Query: 72 LNGFTEFLRKLGAGRLMAMGVVTAGLIAFFAYMTMQFTTQPMSLLYADLDMTDSGEILSKLEAMNIPYQLQGDGSTILVPQDQARRLRMTLAEQGIPAGGTVGYEIFDKSDMLGQTSFAQNINQLRAMEGELALTIRSISSI 497
+NGFTEF++ LG R++++G+V AGLIAFFAY+ ++ T PMSLLY+DL D+ +I+++L+A IPY+L+GDG+ I VP ++A RLRM +AEQG+P GG+VGYEIFD SD LG TSF QN+N LRA+EGELA TIR+I I
Sbjct: 1 MNGFTEFVKTLGPARILSLGLVAAGLIAFFAYVGLRVTEAPMSLLYSDLTQEDASQIITQLDAQAIPYELRGDGTKIYVPDNRALRLRMAMAEQGLPTGGSVGYEIFDNSDALGTTSFVQNLNYLRALEGELARTIRTIDRI 142
BLAST of mRNA_P-wetherbeei_contig15082.1.1 vs. uniprot
Match: A0A2Z4UL06_9HYPH (Flagellar M-ring protein n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2Z4UL06_9HYPH) HSP 1 Score: 175 bits (443), Expect = 5.950e-49 Identity = 81/142 (57.04%), Postives = 113/142 (79.58%), Query Frame = 3
Query: 72 LNGFTEFLRKLGAGRLMAMGVVTAGLIAFFAYMTMQFTTQPMSLLYADLDMTDSGEILSKLEAMNIPYQLQGDGSTILVPQDQARRLRMTLAEQGIPAGGTVGYEIFDKSDMLGQTSFAQNINQLRAMEGELALTIRSISSI 497
++ FTEFL+ LG R++++G+V AGL AFFAY+ ++ + PMSLLY+DL D+ +I+S+L+A IPY+L+GDG+ I VP D+A RLRM +AEQG+P+GG+VGYEIFD +D LG TSF QN+N LRA+EGELA TI++I +
Sbjct: 6 VDSFTEFLKTLGPARIISLGLVAAGLFAFFAYVGLRVSESPMSLLYSDLTQEDAAQIISELDAQEIPYELKGDGTKIFVPNDRALRLRMAMAEQGLPSGGSVGYEIFDNADALGTTSFVQNLNYLRALEGELARTIKAIDRV 147
BLAST of mRNA_P-wetherbeei_contig15082.1.1 vs. uniprot
Match: A0A2E5BV21_9HYPH (Flagellar M-ring protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BV21_9HYPH) HSP 1 Score: 174 bits (441), Expect = 1.250e-48 Identity = 80/142 (56.34%), Postives = 112/142 (78.87%), Query Frame = 3
Query: 72 LNGFTEFLRKLGAGRLMAMGVVTAGLIAFFAYMTMQFTTQPMSLLYADLDMTDSGEILSKLEAMNIPYQLQGDGSTILVPQDQARRLRMTLAEQGIPAGGTVGYEIFDKSDMLGQTSFAQNINQLRAMEGELALTIRSISSI 497
++ FTEFL+ LG R++++G+V GL+ FFAY+ ++ + PMSLLYADL D+ +I+++LE +IPY+LQGDG+ I VP+DQA RLRM +AEQG+P+GG VGYEIFD +D LG TSF QN+N LRA+EGEL+ TI++I +
Sbjct: 6 VDSFTEFLKSLGPARILSLGLVAIGLLGFFAYVGLRVSEAPMSLLYADLTSDDAAQIITQLETQSIPYELQGDGTKIFVPRDQALRLRMNMAEQGLPSGGAVGYEIFDNTDALGTTSFVQNLNYLRALEGELSRTIKAIDRV 147
BLAST of mRNA_P-wetherbeei_contig15082.1.1 vs. uniprot
Match: A0A845QEB5_9HYPH (Flagellar M-ring protein n=2 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845QEB5_9HYPH) HSP 1 Score: 172 bits (437), Expect = 5.500e-48 Identity = 83/142 (58.45%), Postives = 115/142 (80.99%), Query Frame = 3
Query: 72 LNGFTEFLRKLGAGRLMAMGVVTAGLIAFFAYMTMQFTTQPMSLLYADLDMTDSGEILSKLEAMNIPYQLQGDGSTILVPQDQARRLRMTLAEQGIPAGGTVGYEIFDKSDMLGQTSFAQNINQLRAMEGELALTIRSISSI 497
++G FLR LG RL+A+G VT LIAFFA + M+ ++ MSLLY+DL ++DS EI++KL+ +NIPY+L+GDG+TILVP+D+A RLRM++A+ G+P+GG+VGYEIFD + LG TSF QN+N LRA+EGELA TIR++ S+
Sbjct: 1 MDGTLGFLRGLGPMRLLALGSVTIALIAFFAVIMMRVSSPTMSLLYSDLSVSDSAEIIAKLDGLNIPYELKGDGTTILVPKDEALRLRMSMAQAGLPSGGSVGYEIFDNTSALGTTSFVQNMNHLRALEGELARTIRALDSV 142
BLAST of mRNA_P-wetherbeei_contig15082.1.1 vs. uniprot
Match: A0A081BEL9_9HYPH (Flagellar M-ring protein n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BEL9_9HYPH) HSP 1 Score: 171 bits (432), Expect = 2.280e-47 Identity = 78/142 (54.93%), Postives = 110/142 (77.46%), Query Frame = 3
Query: 72 LNGFTEFLRKLGAGRLMAMGVVTAGLIAFFAYMTMQFTTQPMSLLYADLDMTDSGEILSKLEAMNIPYQLQGDGSTILVPQDQARRLRMTLAEQGIPAGGTVGYEIFDKSDMLGQTSFAQNINQLRAMEGELALTIRSISSI 497
+N F +FL+ LG R+ A+G+V AGL FFA++T++ T +PM+LLY++LD D+ IL++L+A NIPY+L+GDG+ I VP+++ R+RM +AEQG+P G VGYEIFD +D LG TSF QN+N LRA+EGE+A TIRSI +
Sbjct: 1 MNSFADFLKTLGPSRIAALGLVAAGLFGFFAFVTIKVTEEPMALLYSELDQQDAAAILAELDAQNIPYELKGDGTRIFVPENRVLRMRMAMAEQGLPNGNIVGYEIFDNADALGTTSFVQNLNYLRALEGEMARTIRSIDRV 142
BLAST of mRNA_P-wetherbeei_contig15082.1.1 vs. uniprot
Match: UPI0014225E95 (flagellar M-ring protein FliF n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI0014225E95) HSP 1 Score: 169 bits (429), Expect = 6.760e-47 Identity = 80/142 (56.34%), Postives = 107/142 (75.35%), Query Frame = 3
Query: 72 LNGFTEFLRKLGAGRLMAMGVVTAGLIAFFAYMTMQFTTQPMSLLYADLDMTDSGEILSKLEAMNIPYQLQGDGSTILVPQDQARRLRMTLAEQGIPAGGTVGYEIFDKSDMLGQTSFAQNINQLRAMEGELALTIRSISSI 497
+N E L+ LG RL M V AG+IAFF Y+T + + MSLLYADLD DSG+I ++LE MN+PY++ DG ILVPQDQ R R+ +AE+G+P+GG++GYEIFD+S+ LG T+F QNIN +RA+EGELA TIRS+S++
Sbjct: 1 MNSLLETLKNLGPARLGTMAAVAAGIIAFFIYLTSRLASPEMSLLYADLDAQDSGQITARLEQMNVPYRITEDGGKILVPQDQVGRTRLVIAEEGLPSGGSIGYEIFDRSEGLGTTNFVQNINHVRALEGELARTIRSVSNV 142
BLAST of mRNA_P-wetherbeei_contig15082.1.1 vs. uniprot
Match: A0A848Z4J6_9PROT (Flagellar M-ring protein n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848Z4J6_9PROT) HSP 1 Score: 168 bits (425), Expect = 2.390e-46 Identity = 77/142 (54.23%), Postives = 114/142 (80.28%), Query Frame = 3
Query: 72 LNGFTEFLRKLGAGRLMAMGVVTAGLIAFFAYMTMQFTTQPMSLLYADLDMTDSGEILSKLEAMNIPYQLQGDGSTILVPQDQARRLRMTLAEQGIPAGGTVGYEIFDKSDMLGQTSFAQNINQLRAMEGELALTIRSISSI 497
++ F++ LR LG RL A+G V GLIAFFA++T + +T MSLLYADLD+TDSGEI++KL+ + +PYQ++G+G +I+VP DQ R R+ +A++G+P GG++GYEIFD+++ G +SF QN+N+LRA+EGELA TI +I+S+
Sbjct: 1 MDAFSQTLRSLGPARLAAIGAVAIGLIAFFAFVTTRLSTGDMSLLYADLDLTDSGEIVTKLDELALPYQIRGNGGSIMVPADQVARARLLMAQEGLPKGGSLGYEIFDRTEGFGSSSFMQNVNRLRALEGELARTIGTIASV 142
BLAST of mRNA_P-wetherbeei_contig15082.1.1 vs. uniprot
Match: A0A2A4S6X9_9HYPH (Flagellar M-ring protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A4S6X9_9HYPH) HSP 1 Score: 168 bits (425), Expect = 2.560e-46 Identity = 74/142 (52.11%), Postives = 112/142 (78.87%), Query Frame = 3
Query: 72 LNGFTEFLRKLGAGRLMAMGVVTAGLIAFFAYMTMQFTTQPMSLLYADLDMTDSGEILSKLEAMNIPYQLQGDGSTILVPQDQARRLRMTLAEQGIPAGGTVGYEIFDKSDMLGQTSFAQNINQLRAMEGELALTIRSISSI 497
+N F EFL+ +GAGR++A+G+V LI FFAY+T++ + ++L+Y++L D+ +++S+L+A+NIPY L+GDG+ I VPQD+ RLR+++AEQG+P GG+VGYEIFD +D LG TSF QN+N +RA+EGEL+ TI I+ +
Sbjct: 1 MNSFAEFLKSMGAGRIVALGIVGMALIGFFAYVTVRISEPQLALMYSELTQDDAAQVISQLDALNIPYALRGDGTKIFVPQDKVLRLRLSMAEQGLPKGGSVGYEIFDNTDTLGVTSFVQNLNYMRALEGELSRTISEINQV 142 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15082.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15082.1.1 >prot_P-wetherbeei_contig15082.1.1 ID=prot_P-wetherbeei_contig15082.1.1|Name=mRNA_P-wetherbeei_contig15082.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp MAMGVVTAGLIAFFAYMTMQFTTQPMSLLYADLDMTDSGEILSKLEAMNIback to top mRNA from alignment at P-wetherbeei_contig15082:3..499- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15082.1.1 ID=mRNA_P-wetherbeei_contig15082.1.1|Name=mRNA_P-wetherbeei_contig15082.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=497bp|location=Sequence derived from alignment at P-wetherbeei_contig15082:3..499- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15082:3..499- >mRNA_P-wetherbeei_contig15082.1.1 ID=mRNA_P-wetherbeei_contig15082.1.1|Name=mRNA_P-wetherbeei_contig15082.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig15082:3..499- (Phaeothamnion wetherbeei SAG_119_79)back to top |