mRNA_P-wetherbeei_contig150.7.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig150.7.1 vs. uniprot
Match: A0A6H5KB20_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB20_9PHAE) HSP 1 Score: 120 bits (302), Expect = 8.410e-30 Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 1
Query: 1 HAACEQWVVFSDLHVSTASLDICLQARMVLDVVHEEAMRRPNCGIAFLGDFWQARGTIKVELLNAVMNRLSRWQRPVIMIPGNHDQVS 264
H ++W+VFSDLHVS ASL + L+ VLD V+EEAM+R CGIAFLGDFW ARG++KV+LL VM RL+ W RPV+MIPGNHDQV+
Sbjct: 375 HVTMKEWLVFSDLHVSPASLAVSLE---VLDRVNEEAMKRSACGIAFLGDFWHARGSLKVDLLVPVMERLATWTRPVVMIPGNHDQVT 459
BLAST of mRNA_P-wetherbeei_contig150.7.1 vs. uniprot
Match: D7FQ73_ECTSI (DNA double-strand break repair rad50 ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ73_ECTSI) HSP 1 Score: 120 bits (301), Expect = 1.150e-29 Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 1
Query: 1 HAACEQWVVFSDLHVSTASLDICLQARMVLDVVHEEAMRRPNCGIAFLGDFWQARGTIKVELLNAVMNRLSRWQRPVIMIPGNHDQVS 264
HA ++W+VFSDLHVS ASL + L+ VLD V+EEAM+R CGIAFLGDFW ARG++KV+LL VM L+ W RPV+MIPGNHDQV+
Sbjct: 375 HATMKEWLVFSDLHVSPASLAVSLE---VLDRVNEEAMKRSACGIAFLGDFWHARGSLKVDLLVPVMEHLATWTRPVVMIPGNHDQVT 459
BLAST of mRNA_P-wetherbeei_contig150.7.1 vs. uniprot
Match: A0A482SKU5_9ARCH (Metallophos domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKU5_9ARCH) HSP 1 Score: 109 bits (273), Expect = 6.000e-29 Identity = 51/87 (58.62%), Postives = 64/87 (73.56%), Query Frame = 1
Query: 1 HAACEQWVVFSDLHVSTASLDICLQARMVLDVVHEEAMRRPNCGIAFLGDFWQARGTIKVELLNAVMNRLSRWQRPVIMIPGNHDQV 261
HA QWVVFSDLHV S++ C ++L+ VHEEA++R + GI FLGDFW RG++ V+LLN VM L +W +PVIMIPGNHDQV
Sbjct: 20 HAQTHQWVVFSDLHVKPTSIETC---ELLLNCVHEEAVKR-DAGIIFLGDFWHVRGSLNVDLLNRVMKALEKWTQPVIMIPGNHDQV 102
BLAST of mRNA_P-wetherbeei_contig150.7.1 vs. uniprot
Match: A0A448ZKB3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKB3_9STRA) HSP 1 Score: 113 bits (282), Expect = 4.190e-27 Identity = 51/89 (57.30%), Postives = 68/89 (76.40%), Query Frame = 1
Query: 1 HAACEQWVVFSDLHVSTASLDICLQARMVLDVVHEEAMR-RPNCGIAFLGDFWQARGTIKVELLNAVMNRLSRWQRPVIMIPGNHDQVS 264
HA E+WVVF+DLH S A+LD CL+ VLDVVH+ AM+ + CG+ FLGDFW RGT++V+ LNA++ L W+ P++MIPGNHDQV+
Sbjct: 165 HATYERWVVFTDLHCSPATLDTCLE---VLDVVHDTAMQQKEKCGVLFLGDFWHHRGTLRVDCLNAILGALRSWKVPMVMIPGNHDQVT 250
BLAST of mRNA_P-wetherbeei_contig150.7.1 vs. uniprot
Match: A0A836CHZ6_9STRA (Metallophos domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ6_9STRA) HSP 1 Score: 112 bits (281), Expect = 5.760e-27 Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 1 HAACEQWVVFSDLHVSTASLDICLQARMVLDVVHEEAMRRPNCGIAFLGDFWQARGTIKVELLNAVMNRLSRWQRPVIMIPGNHDQVSQ 267
H A QWVVFSDLHV SL +C++ VLD V EA RP G+ FLGDFW RGT++V+LLNAV+ RL+ W+ PV+++PGNHDQ +
Sbjct: 266 HRAVTQWVVFSDLHVGVGSLSVCME---VLDRVRAEAEARPGAGVLFLGDFWHLRGTLRVDLLNAVLARLAAWRAPVVLLPGNHDQCQK 351
BLAST of mRNA_P-wetherbeei_contig150.7.1 vs. uniprot
Match: A0A1E7FVC2_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVC2_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.440e-26 Identity = 51/89 (57.30%), Postives = 66/89 (74.16%), Query Frame = 1
Query: 1 HAACEQWVVFSDLHVSTASLDICLQARMVLDVVHEEAMRRPN-CGIAFLGDFWQARGTIKVELLNAVMNRLSRWQRPVIMIPGNHDQVS 264
HA ++WVVF+DLH S +LD CL+ VL +VHE AM++ CGI FLGDFW RGT++V+ LNA++N WQ P+IMIPGNHDQV+
Sbjct: 21 HATYKKWVVFTDLHCSPTTLDTCLE---VLHIVHETAMKQTEKCGILFLGDFWHHRGTLRVDCLNAILNEFRSWQVPMIMIPGNHDQVT 106
BLAST of mRNA_P-wetherbeei_contig150.7.1 vs. uniprot
Match: A0A1Y1HYH7_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYH7_KLENI) HSP 1 Score: 102 bits (255), Expect = 1.850e-23 Identity = 51/83 (61.45%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 16 QWVVFSDLHVSTASLDICLQARMVLDVVHEEAMRRPNCGIAFLGDFWQARGTIKVELLNAVMNRLSRWQRPVIMIPGNHDQVS 264
+WVVFSDLH+S +LDICLQ L VH EA R N GI FLGDFW RG + VE LN V+ + WQRP +MIPGNHDQVS
Sbjct: 145 RWVVFSDLHLSRRTLDICLQT---LRQVHAEAAAR-NAGILFLGDFWHERGALPVEPLNQVLQVIQAWQRPTLMIPGNHDQVS 223
BLAST of mRNA_P-wetherbeei_contig150.7.1 vs. uniprot
Match: A0A7S3V904_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V904_9STRA) HSP 1 Score: 102 bits (253), Expect = 3.460e-23 Identity = 46/84 (54.76%), Postives = 62/84 (73.81%), Query Frame = 1
Query: 13 EQWVVFSDLHVSTASLDICLQARMVLDVVHEEAMRRPNCGIAFLGDFWQARGTIKVELLNAVMNRLSRWQRPVIMIPGNHDQVS 264
++WV F+DLH + A+L C+ VL VH +A +R N G+ FLGDFW RGT++V+ LNAV+N LS W+ P+IM+PGNHDQVS
Sbjct: 298 KKWVTFTDLHCAPATLTTCIN---VLSAVHAKA-KRENAGVLFLGDFWHHRGTVRVDCLNAVLNALSEWEVPMIMLPGNHDQVS 377
BLAST of mRNA_P-wetherbeei_contig150.7.1 vs. uniprot
Match: A0A2K3D184_CHLRE (Metallophos domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D184_CHLRE) HSP 1 Score: 101 bits (251), Expect = 6.470e-23 Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 1
Query: 7 ACEQWVVFSDLHVSTASLDICLQARMVLDVVHEEAMRRPNCGIAFLGDFWQARGTIKVELLNAVMNRLSRWQRPVIMIPGNHDQ-VSQTNKR 279
A +QWVVFSDLHV +SL +CLQ VL VH EA R N GI FLGDFW RG + VE LN V+ +S W+ PV+M+ GNHDQ ++TN R
Sbjct: 267 AVQQWVVFSDLHVRESSLGVCLQ---VLRAVHSEAQAR-NAGILFLGDFWDKRGALPVEPLNQVLQEMSGWRCPVLMLVGNHDQRTARTNSR 354
BLAST of mRNA_P-wetherbeei_contig150.7.1 vs. uniprot
Match: A0A7S1SKF1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SKF1_9CHLO) HSP 1 Score: 94.7 bits (234), Expect = 6.500e-23 Identity = 47/84 (55.95%), Postives = 58/84 (69.05%), Query Frame = 1
Query: 13 EQWVVFSDLHVSTASLDICLQARMVLDVVHEEAMRRPNCGIAFLGDFWQARGTIKVELLNAVMNRLSRWQRPVIMIPGNHDQVS 264
+ WVVFSDLHVS ASLD L+A L V EEA RR N G+ FLGDFW RG++ VE LNA+++ W P +M+ GNHDQV+
Sbjct: 12 QSWVVFSDLHVSAASLDTSLRA---LRAVKEEAARR-NAGVLFLGDFWHHRGSLPVEPLNAILDEFVDWTAPTLMLVGNHDQVT 91 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig150.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig150.7.1 >prot_P-wetherbeei_contig150.7.1 ID=prot_P-wetherbeei_contig150.7.1|Name=mRNA_P-wetherbeei_contig150.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=95bp HAACEQWVVFSDLHVSTASLDICLQARMVLDVVHEEAMRRPNCGIAFLGDback to top mRNA from alignment at P-wetherbeei_contig150:12386..13252+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig150.7.1 ID=mRNA_P-wetherbeei_contig150.7.1|Name=mRNA_P-wetherbeei_contig150.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=867bp|location=Sequence derived from alignment at P-wetherbeei_contig150:12386..13252+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig150:12386..13252+ >mRNA_P-wetherbeei_contig150.7.1 ID=mRNA_P-wetherbeei_contig150.7.1|Name=mRNA_P-wetherbeei_contig150.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig150:12386..13252+ (Phaeothamnion wetherbeei SAG_119_79)back to top |