mRNA_P-wetherbeei_contig14973.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14973.1.1 vs. uniprot
Match: I2CRI6_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRI6_NANGC) HSP 1 Score: 123 bits (309), Expect = 2.630e-32 Identity = 71/125 (56.80%), Postives = 85/125 (68.00%), Query Frame = 1
Query: 88 PCAQTAVARLFASHAH-SSNRSRRGLYHGKDVRFGNTVSFSHRVHRRKFKPNVHVKRLWSETLERLCKFHITTHTLRIVDKYGGLDGYLLKTSDAKLNSSQGLAVKREIEEVLALRATATETTAA 459
P A +A FA SSNR+RRGLY GKDV FGN VS S+R RR FKPN H KRLWS+TL+ + F++TT TLR+VDK GGLD YLL+T D KL+S G+ VKR IE + A T + TAA
Sbjct: 7 PVALVDLAAAFARMGRPSSNRARRGLYAGKDVLFGNKVSHSNRKTRRMFKPNAHHKRLWSDTLQDMIPFYLTTTTLRMVDKVGGLDNYLLQTPDHKLDSESGIKVKRRIENIKARSDTIEKPTAA 131
BLAST of mRNA_P-wetherbeei_contig14973.1.1 vs. uniprot
Match: A0A7S3ZX50_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZX50_9STRA) HSP 1 Score: 120 bits (301), Expect = 6.080e-31 Identity = 70/134 (52.24%), Postives = 85/134 (63.43%), Query Frame = 1
Query: 31 TMSFLRHAVMGLRDRLCAAPCAQTAVARLFASHAHSSNRSRRGLYHGKDVRFGNTVSFSHRVHRRKFKPNVHVKRLWSETLERLCKFHITTHTLRIVDKYGGLDGYLLKTSDAKLNSSQGLAVKREIEEVLALR 432
T + LR A+ L L A P A T + A +SNRS+RG+Y GKD+RFGN +SFSHR RR FKPN KRLWSETL +F++TTH LR +D+ GG+D YLLKT DAKL S G +R IE A R
Sbjct: 32 TDNMLRSALSRLT--LTARPAAPT------TTRAFASNRSKRGIYAGKDIRFGNNISFSHRKTRRTFKPNAQRKRLWSETLGCWLRFNLTTHALRCIDRAGGIDAYLLKTPDAKLGSIAGANARRMIEAARASR 157
BLAST of mRNA_P-wetherbeei_contig14973.1.1 vs. uniprot
Match: A0A7S2RZD4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZD4_9STRA) HSP 1 Score: 115 bits (287), Expect = 4.440e-29 Identity = 61/101 (60.40%), Postives = 70/101 (69.31%), Query Frame = 1
Query: 136 SSNRSRRGLYHGKDVRFGNTVSFSHRVHRRKFKPNVHVKRLWSETLERLCKFHITTHTLRIVDKYGGLDGYLLKTSDAKLNSSQGLAVKREIEEVLALRAT 438
+S R+ RGL+ KD+RFGN VS S R RR +KPN KRLWSETLE KF TT+ L+ +DK GGLD YLL+T D KLNS GLA KR IEEVL R T
Sbjct: 17 ASGRALRGLFGNKDIRFGNKVSHSERKTRRSWKPNAQNKRLWSETLEEFLKFKTTTYVLKCIDKVGGLDNYLLRTPDKKLNSITGLAAKRRIEEVLQQRQT 117
BLAST of mRNA_P-wetherbeei_contig14973.1.1 vs. uniprot
Match: A0A6H5KS33_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KS33_9PHAE) HSP 1 Score: 115 bits (288), Expect = 4.550e-29 Identity = 60/98 (61.22%), Postives = 73/98 (74.49%), Query Frame = 1
Query: 139 SNRSRRGLYHGKDVRFGNTVSFSHRVHRRKFKPNVHVKRLWSETLERLCKFHITTHTLRIVDKYGGLDGYLLKTSDAKLNSSQGLAVKREIEEVLALR 432
S RS+ GLY GKD+ FGNT+SFSH+ +RR +KPNV K L+SETL+ KF++TTH LR VD+ GG+D YLLKT D LNS QG KR+IEE LA R
Sbjct: 28 SKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRKIEEALAAR 125
BLAST of mRNA_P-wetherbeei_contig14973.1.1 vs. uniprot
Match: A0A7R9ZLR2_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLR2_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.190e-25 Identity = 58/97 (59.79%), Postives = 68/97 (70.10%), Query Frame = 1
Query: 121 ASHAHSSNRSRRGLYHGKDVRFGNTVSFSHRVHRRKFKPNVHVKRLWSETLERLCKFHITTHTLRIVDKYGGLDGYLLKTSDAKLNSSQGLAVKREI 411
AS H SNRSRRGLY GKDVR GN VSFS + RRKFKPNV KRL+SETL+ + +FH+TT LR +DK GGLD YLL S + +GL K+ I
Sbjct: 69 ASARHRSNRSRRGLYDGKDVRSGNNVSFSMKATRRKFKPNVFRKRLYSETLDEMVRFHVTTSALRSIDKAGGLDNYLL--SSKHVLEGEGLMAKKRI 163
BLAST of mRNA_P-wetherbeei_contig14973.1.1 vs. uniprot
Match: A0A7S3K4M7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4M7_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.670e-24 Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = 1
Query: 133 HSSNRSRRGLYHGKDVRFGNTVSFSHRVHRRKFKPNVHVKRLWSETLERLCKFHITTHTLRIVDKYGGLDGYLLKTSDAKLNSSQGLAVKR 405
H SNR++RGLYH KDVR GN+VSFS R RRK+KPNV K+ WS+ L +F +TTH ++ +DK GG+D Y+L+T ++KLNS G KR
Sbjct: 35 HGSNRAKRGLYHLKDVRSGNSVSFSERKTRRKWKPNVQTKKFWSQILCCWLRFKVTTHAIKCIDKKGGIDKYILETPESKLNSIAGNNAKR 125
BLAST of mRNA_P-wetherbeei_contig14973.1.1 vs. uniprot
Match: A0A7S2HHC9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHC9_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.840e-24 Identity = 55/98 (56.12%), Postives = 67/98 (68.37%), Query Frame = 1
Query: 130 AHSSNRSRRGLYHGKDVRFGNTVSFSHRVHRRKFKPNVHVKRLWSETLERLCKFHITTHTLRIVDKYGGLDGYLLKTSDAKLNSSQGLAVKREIEEVL 423
A +S R+ RGL+ GKDVRFGN VS S R RR +KPNV K+LWSETL+ +F++T H +R VDK GG+D YLL D L S QGLA K +I E L
Sbjct: 13 ARTSGRALRGLFGGKDVRFGNKVSHSERKTRRMWKPNVQRKKLWSETLQDYLRFNMTVHAMRCVDKAGGVDNYLLAIPDKDLKSDQGLAAKCKIIEKL 110
BLAST of mRNA_P-wetherbeei_contig14973.1.1 vs. uniprot
Match: A0A6U6KDT0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6KDT0_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.020e-24 Identity = 60/109 (55.05%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 139 SNRSRRGLYHGKDVRFGNTVSFSHRVHRRKFKPNVHVKRLWSETLERLCKFHITTHTLRIVDKYGGLDGYLLKTSDAKLNSSQGLAVKREIEEVLAL-RATATETTAAE 462
SNRSRRGLY GKD+R GN VSFS++ +RKFKPNV K ++SETL+ +FHITT LR +DK+GGLD YLLK+ S +GLA K+ I + + L + TET AE
Sbjct: 115 SNRSRRGLYDGKDIRSGNNVSFSNKKTKRKFKPNVFKKSVYSETLDEKIRFHITTSALRSIDKFGGLDNYLLKSKHVA--SGEGLAAKKRILQQMWLNKKRETETNVAE 221
BLAST of mRNA_P-wetherbeei_contig14973.1.1 vs. uniprot
Match: A0A8J9TIJ5_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TIJ5_PHATR) HSP 1 Score: 100 bits (249), Expect = 4.930e-24 Identity = 50/73 (68.49%), Postives = 58/73 (79.45%), Query Frame = 1
Query: 139 SNRSRRGLYHGKDVRFGNTVSFSHRVHRRKFKPNVHVKRLWSETLERLCKFHITTHTLRIVDKYGGLDGYLLK 357
SNRSRRGLY GKDVR GN VSFS R +R FKPNV +KR++SE L+ + KFH+TT TLR +DK GGLD YLLK
Sbjct: 12 SNRSRRGLYDGKDVRTGNNVSFSMRATKRTFKPNVMIKRVYSEILDEMVKFHLTTSTLRSIDKAGGLDNYLLK 84
BLAST of mRNA_P-wetherbeei_contig14973.1.1 vs. uniprot
Match: A0A1Z5JRZ0_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JRZ0_FISSO) HSP 1 Score: 101 bits (251), Expect = 8.590e-24 Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 139 SNRSRRGLYHGKDVRFGNTVSFSHRVHRRKFKPNVHVKRLWSETLERLCKFHITTHTLRIVDKYGGLDGYLLKTSDAKLNSSQGLAVKREI 411
SNRSRRGLY GKD+R GN+VSFS + +RKFKPNV +KR++SE L+ + +FH+TT LR +DK GGLD YL+K + +G VKR+I
Sbjct: 26 SNRSRRGLYDGKDIRSGNSVSFSMKSTKRKFKPNVFLKRVYSEILDEMVQFHLTTSALRSIDKAGGLDNYLMKN---EFTEGEGFEVKRKI 113 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14973.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14973.1.1 >prot_P-wetherbeei_contig14973.1.1 ID=prot_P-wetherbeei_contig14973.1.1|Name=mRNA_P-wetherbeei_contig14973.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=175bp MSFLRHAVMGLRDRLCAAPCAQTAVARLFASHAHSSNRSRRGLYHGKDVRback to top mRNA from alignment at P-wetherbeei_contig14973:256..1092- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14973.1.1 ID=mRNA_P-wetherbeei_contig14973.1.1|Name=mRNA_P-wetherbeei_contig14973.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=837bp|location=Sequence derived from alignment at P-wetherbeei_contig14973:256..1092- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14973:256..1092- >mRNA_P-wetherbeei_contig14973.1.1 ID=mRNA_P-wetherbeei_contig14973.1.1|Name=mRNA_P-wetherbeei_contig14973.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=525bp|location=Sequence derived from alignment at P-wetherbeei_contig14973:256..1092- (Phaeothamnion wetherbeei SAG_119_79)back to top |