mRNA_P-wetherbeei_contig14814.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14814.3.1 vs. uniprot
Match: A0A3C0TYL7_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYL7_9PROT) HSP 1 Score: 128 bits (321), Expect = 6.350e-35 Identity = 64/148 (43.24%), Postives = 93/148 (62.84%), Query Frame = 1
Query: 4 PELQLQRPELVELLEYWKRKRDTRPFPSRRDISPREMIEVLPWLHMYDVLGGGEEYLCRLGGTALSDLTGRTDSRDRSISTLPYPVFVRLKQALDWVVRTRAPLRTYNPSTSIPGQEFQGSESFFAPLSNDGAAIDVIIGATMLNNRK 447
P+L R EL E L+YW+ K R FP+R DI+PRE+ +LPW++MYDV GEE+ RL G+ LS D R + +S+ P + R ++ +DWV+ TR P+R S+SIPGQEFQG+E PLS++G I++++ +L K
Sbjct: 12 PDLNFSRGELTEFLDYWRSKSRERNFPTRADINPREIERLLPWVNMYDVSPEGEEHRIRLLGSVLSSNFNIGDLRGKPLSSFPPLLASRARKGIDWVLETRGPIRAVATSSSIPGQEFQGTEICAVPLSDNGQDINIVMVIALLEKHK 159
BLAST of mRNA_P-wetherbeei_contig14814.3.1 vs. uniprot
Match: A0A3C0TRJ0_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TRJ0_9PROT) HSP 1 Score: 106 bits (265), Expect = 2.960e-27 Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 49 YWKRKRDTRPFPSRRDISPREMIEVLPWLHMYDVLGGGEEYLCRLGGTALSDLTGRTDSRDRSISTLPYPVFVRLKQALDWVVRTRAPLRTYNPSTS 339
YW KR R FPSR DI+PR++ +LPWLH++DV GEE RL GT LS+ G D R + +STLP V+ R+KQA++WV+ RAP+RTY P+ +
Sbjct: 1 YWNAKRAGREFPSREDITPRDIPHLLPWLHLHDVPPSGEEIHIRLVGTMLSETFGDGDMRGKPLSTLPAGVYARVKQAINWVMDARAPIRTYAPNAA 97
BLAST of mRNA_P-wetherbeei_contig14814.3.1 vs. uniprot
Match: UPI001A05334E (PAS domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001A05334E) HSP 1 Score: 66.6 bits (161), Expect = 7.580e-11 Identity = 39/132 (29.55%), Postives = 67/132 (50.76%), Query Frame = 1
Query: 31 LVELLEYWKRKRDTRPFPSRRDISPREMIEVLPWLHMYDVLGGGEEYLCRLGGTALSDLTGRTDSRDRSISTLPYPVFVRLKQALDWVVRTRAPLRTYNPSTSIPGQEFQGSESFFAPLSNDGAAIDVIIGA 426
L L EYW KR RP P+RRDI P E+ ++L ++++Y+V ++ RL G+ ++++ G+ + + + P V K A D V P S + G+ + PL +DG ++D+I+ A
Sbjct: 20 LRRLYEYWNAKRGDRPAPTRRDIDPVEIPDLLGFVNIYEVQDEPRDFKVRLNGSEVAEMLGQDITGKYCSTVISGPDAVSYKTAFDICVDQCRPA-IVETSLAFCGKPYMAQTIIVLPLGSDGESVDMIVTA 150
BLAST of mRNA_P-wetherbeei_contig14814.3.1 vs. uniprot
Match: A0A843RNW1_9PROT (PAS domain-containing protein n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RNW1_9PROT) HSP 1 Score: 65.1 bits (157), Expect = 3.710e-10 Identity = 41/139 (29.50%), Postives = 69/139 (49.64%), Query Frame = 1
Query: 31 LVELLEYWKRKRDTRPFPSRRDISPREMIEVLPWLHMYDVLGGGEEYLCRLGGTALSD-----LTGRTDSRDRSISTLPYPVFVRLKQALDWVVRTRAPLRTYNPSTSIPGQEFQGSESFFAPLSNDGAAIDVIIGATM 432
L L YW + PSRRDI P ++ ++LP L + DV+G E+++ RL G+ + D L G++ + + + P PV ++ V R P R S + G++ ++ PLS DG +DV++G +
Sbjct: 28 LRRLYNYWWSRCRNGAMPSRRDIDPLDIPDLLPNLFLLDVVGNAEDFVFRLAGSLVEDAFSMPLRGKSITEIQKAAGTPIPVAQHIE-----VARGGGP-RYREGSVLVAGRDHLRTQRLLLPLSTDGGTVDVLMGGAI 160
BLAST of mRNA_P-wetherbeei_contig14814.3.1 vs. uniprot
Match: A0A437QY27_9PROT (PAS domain-containing protein n=2 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A437QY27_9PROT) HSP 1 Score: 63.5 bits (153), Expect = 1.130e-9 Identity = 45/145 (31.03%), Postives = 71/145 (48.97%), Query Frame = 1
Query: 16 LQRPELVELLEYWKRKRDTRPFPSRRDISPREMIEVLPWLHMYDVLGGGEEYLCRLGGTAL-----SDLTGRTDSRDRSISTLPYPVFVRLKQALDWVVRTRAPLRTYNPSTSIPGQEFQGSESFF----APLSNDGAAIDVIIG 423
L+ P L E L YW K+ R FPSR D+ P ++ +LP++ + DVLG G ++ RL GT + D TG S R I + +L + V +AP+ + +P + G + F+ PLS +G +D++ G
Sbjct: 26 LKPPSLEEFLSYWDSKKSGRTFPSRLDLDPVDIPNMLPFVFLVDVLGQGHDFRYRLVGTDIVRNTKKDFTGYLLSEIREIGSQG-----KLIEMYQRTVADKAPV-----TERLPFKTRGGVKKFYDVAVTPLSRNGEVVDMLFG 160
BLAST of mRNA_P-wetherbeei_contig14814.3.1 vs. uniprot
Match: UPI001D05189A (PAS domain-containing protein n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001D05189A) HSP 1 Score: 63.2 bits (152), Expect = 1.350e-9 Identity = 38/139 (27.34%), Postives = 72/139 (51.80%), Query Frame = 1
Query: 31 LVELLEYWKRKRDTRPFPSRRDISPREMIEVLPWLHMYDVLGGGEEYLCRLGGTALSD-----LTGRTDSRDRSISTLPYPVFVRLKQALDWVVRTRAPLRTYNPSTSIPGQEFQGSESFFAPLSNDGAAIDVIIGATM 432
L L +YW+ + +PSRRDI P ++ ++LP + + DV+G ++++ RL GT + D L G++ + + + P PV ++ V R P R + G++ + PL++DG ++DV++G +
Sbjct: 6 LRRLYDYWRSRCGGGTYPSRRDIDPIDIPDLLPNIFLLDVVGDAQDFVFRLAGTLVEDAFSMPLRGKSITEIQKAAGTPIPVEHHVE-----VARGGGP-RYREGEMLVAGRDHWKTHRLLLPLASDGCSVDVLMGGAI 138
BLAST of mRNA_P-wetherbeei_contig14814.3.1 vs. uniprot
Match: A0A6N6VFW9_9HYPH (PAS domain-containing protein n=2 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VFW9_9HYPH) HSP 1 Score: 63.9 bits (154), Expect = 1.590e-9 Identity = 48/153 (31.37%), Postives = 76/153 (49.67%), Query Frame = 1
Query: 25 PELVELLEYWKRKRDTRPFPSRRDISPREMIEVLPWLHMYDVLGGGEEYLCRLGGTAL-----SDLTGRTDSRDRSISTLPY-PVFVRLKQALDWVVRTRAPLRTYNPSTSIPGQEFQGSESFFA------PLSNDGAAIDVIIGATMLNNRK 447
P + L +YW KR R P R DISP E++++LP L + DVLG GE++ RL GTAL + TG+ S + +++P P V+ + W+ TR P + G S+ A PL+ G +I ++GA + +++
Sbjct: 72 PGVSALTDYWLAKRGPRTMPDRADISPAEIVKLLPNLIICDVLGDGEDFRTRLFGTALVLIVGEERTGKCLSEFGTRASVPTRPEIVQFR----WLDVTRRAYALKEP-VFVNGTMSSSDRSYLALHAVSMPLTAGGTSIAQMLGAMFVTDKR 219
BLAST of mRNA_P-wetherbeei_contig14814.3.1 vs. uniprot
Match: A0A5J6MLE7_9PROT (Uncharacterized protein n=1 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6MLE7_9PROT) HSP 1 Score: 59.7 bits (143), Expect = 2.570e-8 Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 1
Query: 31 LVELLEYWKRKRDTRPFPSRRDISPREMIEVLPWLHMYDVLGGGEEYLCRLGGTALSDLTGRTDS 225
L +L YW KR RP PSRRD+ PR++ +LP+LH+ DV + RL G+ L D+ GR S
Sbjct: 10 LADLFAYWSAKRGNRPAPSRRDLDPRDITRLLPFLHLIDVEPEPMRFRHRLVGSELVDMMGRNVS 74
BLAST of mRNA_P-wetherbeei_contig14814.3.1 vs. uniprot
Match: UPI0012BD1B80 (PAS domain-containing protein n=1 Tax=Curvivirga aplysinae TaxID=2529852 RepID=UPI0012BD1B80) HSP 1 Score: 58.9 bits (141), Expect = 4.200e-8 Identity = 39/128 (30.47%), Postives = 62/128 (48.44%), Query Frame = 1
Query: 40 LLEYWKRKRDTRPFPSRRDISPREMIEVLPWLHMYDVLGGGEEYLCRLGGTALSDLTGRTDSRDRSISTLPYPVFVRLKQALDWVVRTRAPLRTYNPSTSIPGQEFQGSESFFAPLSNDGAAIDVIIG 423
L YW KR R PSR+DI P E+ ++LP + M+DV+ ++ RL GT L D+ GR ++ D L V + + + + S S ++F E PLS DG +++++G
Sbjct: 19 LYAYWDDKRGGRKAPSRKDIDPIELRDLLPHMFMFDVIRNPIDFKMRLHGTHLVDVMGRDNTGDYFSKMYRGTEADELWDIYCEVANSFSVIYS-KQSASWMSKDFVHYERLLLPLSEDGDEVNILLG 145
BLAST of mRNA_P-wetherbeei_contig14814.3.1 vs. uniprot
Match: UPI001F0FDD88 (PAS domain-containing protein n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI001F0FDD88) HSP 1 Score: 55.1 bits (131), Expect = 1.070e-6 Identity = 35/118 (29.66%), Postives = 58/118 (49.15%), Query Frame = 1
Query: 82 PSRRDISPREMIEVLPWLHMYDVLGGGEEYLCRLGGTALSDLTGRTDSRDRSISTLPYPV-FVRLKQALDWVVRTRAPLRTYNPSTSIPGQEFQGSESFFAPLSNDGAAIDVIIGATM 432
PSRRDI P E+ ++LP + + DV+G GE+++ RL GT + D T +SI+ + + A V R + + G+E PL++DG +DV++G +
Sbjct: 2 PSRRDIDPVEIPDLLPNIFLLDVVGDGEDFVFRLAGTLVEDAFSMT-LHGKSIAEIQRQAGSTGIPDAHHIEVARGGGPRYQEGNMPVAGREHWMIHRLLLPLASDGETVDVLMGGAI 118 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14814.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14814.3.1 >prot_P-wetherbeei_contig14814.3.1 ID=prot_P-wetherbeei_contig14814.3.1|Name=mRNA_P-wetherbeei_contig14814.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp DPELQLQRPELVELLEYWKRKRDTRPFPSRRDISPREMIEVLPWLHMYDVback to top mRNA from alignment at P-wetherbeei_contig14814:943..1392- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14814.3.1 ID=mRNA_P-wetherbeei_contig14814.3.1|Name=mRNA_P-wetherbeei_contig14814.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig14814:943..1392- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14814:943..1392- >mRNA_P-wetherbeei_contig14814.3.1 ID=mRNA_P-wetherbeei_contig14814.3.1|Name=mRNA_P-wetherbeei_contig14814.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig14814:943..1392- (Phaeothamnion wetherbeei SAG_119_79)back to top |