mRNA_P-wetherbeei_contig148.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig148.6.1
Unique NamemRNA_P-wetherbeei_contig148.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig148.6.1 vs. uniprot
Match: D8LT94_ECTSI (DNA-directed RNA polymerase III subunit RPC6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT94_ECTSI)

HSP 1 Score: 229 bits (585), Expect = 6.520e-68
Identity = 124/277 (44.77%), Postives = 181/277 (65.34%), Query Frame = 1
Query:    1 IRDNQVKQHFGERYPNVQDIINRLLKDHRIRLEQDKTTNELVYCYVPEELGGKLKDISSEHMMVYQAIERSGNKGVWTADLKRLTSLAQTQMTKCLKDLEKRQLVKSVKSVNARSKKLYMLIDLVPAKDITGGPWYTDNEFDHDFVDVLFNHIVKYVRKAKQATLLQIATELQGSGITDEVLQLDEVAQLINALIFDNRLEEVRYKGAVAAA---AQTGVQYKVAAAIHSAPNAWTSMPCGLCRVRNQCVEGGNISPQTCIYFKEWLAMSYSEDDIF 822
            +    + + FGE YP + D+IN LL D+R++L + +  + + Y  V EE   KL  ++ E MM+YQ IE++GNKG+WT D+K  T++ Q  MTK LK LE R LVK+ KSV ++SKKLYML +L PAK+ITGGPWYTD EFD++FV  L ++++ YV++ +   L  IA  ++ SGI+   L ++EV  +++ L++D  LEEVR  GA +     A  G  YK+A A+    NA+T +PCG C+V   C E G +SP+TC+Y  EWL +  S D++F
Sbjct:   29 VNSEVLSESFGEEYPLLVDVINSLLVDNRLQLSKGEN-DTMWYKLVQEEKAKKLMGLTPEQMMIYQVIEKAGNKGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYELTPAKEITGGPWYTDQEFDYEFVKHLSSYVLSYVKEQETPPLKDIAAAIKVSGISKIDLSMEEVKLIVSTLVYDGLLEEVR--GAASRFNRDAGDGPVYKMAPAVEVV-NAFTEVPCGTCKVMKHCSEDGVVSPKTCVYLAEWLNLPNS-DELF 300          
BLAST of mRNA_P-wetherbeei_contig148.6.1 vs. uniprot
Match: A0A1V9ZF30_9STRA (DNA-directed RNA polymerase III subunit RPC6 n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZF30_9STRA)

HSP 1 Score: 217 bits (553), Expect = 2.970e-63
Identity = 116/284 (40.85%), Postives = 176/284 (61.97%), Query Frame = 1
Query:    1 IRDNQVKQHFGERYPNVQDIINRLLKDHRIRLEQDKTTNELVYCYVPEELGGKLKDIS----------SEHMMVYQAIERSGNKGVWTADLKRLTSLAQTQMTKCLKDLEKRQLVKSVKSVNARSKKLYMLIDLVPAKDITGGPWYTDNEFDHDFVDVLFNHIVKYVRKAKQATLLQIATELQGSGITDEVLQLDEVAQLINALIFDNRLEEVRYKGAVAAAAQTGVQYKVAAAIHSAPNAWTSMPCGLCRVRNQCVEGGNISPQTCIYFKEWLAMSYSEDDIF 822
            + DN +K+ FGE+Y  +   INRL+ + R+++    TT  L+Y  VP+E   +++ +S           EH  V   IE++GNKGVWT D+K  T+LA+  + K ++ LE R LVK+VKS++ ++KKLYML DLVP++DITGGPWY + EFDHDF+D L N + +++R     TL QI  ++  SGI    L  +E+  ++N LI+D R+EEVR    +A      V YK+   + S  +A +  PCG+C V +QC +G  +SP TC+Y  +W+ ++   DD+F
Sbjct:   18 VSDNVIKKSFGEQYAKLPSCINRLVNESRVKILMQGTT--LMYQLVPKEEAERMQGLSYVAVNSNYHWGEHRAVLHEIEKAGNKGVWTRDIKSQTNLAEVTIRKIIRVLETRHLVKAVKSISQKNKKLYMLYDLVPSRDITGGPWYNEQEFDHDFIDTLSNFVCQFIRAKGVVTLQQITDKVHESGIAKVSLGPEEMMSIVNTLIYDERIEEVR-TARLANGEMREVSYKICRDV-SVFDALSEAPCGICPVFDQCADGNIVSPATCVYLTKWMNVA---DDLF 294          
BLAST of mRNA_P-wetherbeei_contig148.6.1 vs. uniprot
Match: A0A067BY85_SAPPC (DNA-directed RNA polymerase III subunit RPC6 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BY85_SAPPC)

HSP 1 Score: 210 bits (534), Expect = 1.400e-60
Identity = 111/274 (40.51%), Postives = 170/274 (62.04%), Query Frame = 1
Query:    1 IRDNQVKQHFGERYPNVQDIINRLLKDHRIRLEQDKTTNELVYCYVPEELGGKLKDISSEHMMVYQAIERSGNKGVWTADLKRLTSLAQTQMTKCLKDLEKRQLVKSVKSVNARSKKLYMLIDLVPAKDITGGPWYTDNEFDHDFVDVLFNHIVKYVRKAKQATLLQIATELQGSGITDEVLQLDEVAQLINALIFDNRLEEVRYKGAVAAAAQTGVQYKVAAAIHSAPNAWTSMPCGLCRVRNQCVEGGNISPQTCIYFKEWLAMSYSEDDIF 822
            I D+ V++ FG++Y  +   INRL+ + RI++    +   ++Y  V +E   +++ +S EH  V   IE+SGNKGVWT D+K  T+L +  + K ++ LE R LVK+VKS++ ++KKLYML DLVP++DITGGPWY + EFDHDF+D L   + +++R     TL QI  ++  SGI    L  DE+  ++N LI+D R+EEVR    +A      V YK+   + S  +  +  PCG+C V  QC +G  +SP TC+Y  +W+ ++   DD+F
Sbjct:   18 IGDDVVRKSFGDQYAKLPVCINRLMGESRIKILMQGSN--VLYQLVTKEESERMQGLSGEHRAVLHEIEKSGNKGVWTRDIKMQTNLPEMTIRKIIRTLESRHLVKAVKSISQKNKKLYMLYDLVPSRDITGGPWYNEQEFDHDFIDTLSTFVCQFIRAKGVVTLQQITDKVHESGIAKVSLGPDEMMSIVNTLIYDERIEEVR-TARLANGEMRDVSYKICRDV-SVFDGLSEAPCGVCPVFEQCADGNIVSPATCVYLTKWMNVA---DDLF 284          
BLAST of mRNA_P-wetherbeei_contig148.6.1 vs. uniprot
Match: A0A024U424_9STRA (DNA-directed RNA polymerase III subunit RPC6 n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024U424_9STRA)

HSP 1 Score: 202 bits (515), Expect = 8.570e-58
Identity = 109/264 (41.29%), Postives = 163/264 (61.74%), Query Frame = 1
Query:    1 IRDNQVKQHFGERYPNVQDIINRLLKDHRIRLEQDKTTNELVYCYVPEELGGKLKDISSEHMMVYQAIERSGNKGVWTADLKRLTSLAQTQMTKCLKDLEKRQLVKSVKSVNARSKKLYMLIDLVPAKDITGGPWYTDNEFDHDFVDVLFNHIVKYVRKAKQATLLQIATELQGSGITDEVLQLDEVAQLINALIFDNRLEEVRYKGAVAAAAQTGVQYKVAAAIHSAPNAWTSMPCGLCRVRNQCVEGGNISPQTCIYFKEWL 792
            I D QV+  F   Y  +  +IN L+ D RI++ Q      L+Y  V +E   +++ ++ E   V   IE++GNKG+WT D+K  T++ +  + K ++ LE R LVK+VKS++ ++KKLYML DLVP++DITGGPWY + EFDHDF+D L N + +++R     TL QI  ++  SGI    L  DE+  ++N LI+D+R+EEVR    +A+     V YKV+  +    +  +  PCG+C V +QC +G  ISP TCIY  +WL
Sbjct:   18 ISDAQVRDSFRAEYDKLPGVINELVTDGRIKIFQQN--GNLMYGLVAKEEAERMRGLTVEQRGVLHEIEKAGNKGIWTRDIKAKTNIPEVIIRKTIRLLETRHLVKAVKSISQKNKKLYMLFDLVPSRDITGGPWYNEQEFDHDFIDTLRNFVCQFIRAKGIVTLKQITDKVHESGIAKVSLGPDEMMSILNTLIYDDRVEEVR-AARLASGEWREVSYKVSREVTDF-DTLSDTPCGVCPVFDQCADGNIISPATCIYLTKWL 277          
BLAST of mRNA_P-wetherbeei_contig148.6.1 vs. uniprot
Match: A0A7R9U7U3_9STRA (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7U3_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.590e-57
Identity = 107/268 (39.93%), Postives = 161/268 (60.07%), Query Frame = 1
Query:    1 IRDNQVKQHFGERYPNVQDIINRLLKDHRIRL--EQDKTTNELVYCYVPEELGGKLKDISSEHMMVYQAIERSGNKGVWTADLKRLTSLAQTQMTKCLKDLEKRQLVKSVKSVNARSKKLYMLIDLVPAKDITGGPWYTDNEFDHDFVDVLFNHIVKYVRKAKQATLLQIATELQGSGITDEVLQLDEVAQLINALIFDNRLEEVRYKGAVAAAAQTGVQYKVAAAIHSAPNAWTSMPCGLCRVRNQCVEGGNISPQTCIYFKEWLAM 798
            + D  ++  FG+ Y  + D++N +L+  R+ +    D T   LVY  V  E   KL+ ++ E  ++YQ I+++GNKG+WT  +   T++ Q  +TK LK LE+RQL+KSVKSV +R KKLYML + VPA +ITGG WY++ EFDH+FV  +   +  Y+++ + A+L  IA  ++ +G +   L  D+V Q++ +LIFD R+E V+           G  Y+    I + P   T  PCG+C V NQC EGG ISP TC+Y   WL +
Sbjct:   36 VSDELLQHEFGKEYGKLADVLNTMLEQRRVTILRAHDDT---LVYKLVSAEKASKLQGLTREQELIYQEIKKAGNKGIWTRKITTETNVQQQVLTKTLKLLEQRQLIKSVKSVTSRRKKLYMLFEEVPATEITGGAWYSEGEFDHEFVSSMSQFVYTYIKQGESASLQDIAKAVRETGFSKVDLSTDDVQQIVESLIFDGRVERVQNPILTQMGLDNGPLYRSKPKI-TTPQFVTENPCGICPVANQCCEGGVISPATCVYMNHWLEL 299          
BLAST of mRNA_P-wetherbeei_contig148.6.1 vs. uniprot
Match: A0A485KM43_9STRA (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KM43_9STRA)

HSP 1 Score: 199 bits (505), Expect = 3.020e-56
Identity = 110/270 (40.74%), Postives = 166/270 (61.48%), Query Frame = 1
Query:    1 IRDNQVKQHFGERYPNVQDIINRLLKDHRIRLEQDKTTNELVYCYVPEELGGKLKDISS------EHMMVYQAIERSGNKGVWTADLKRLTSLAQTQMTKCLKDLEKRQLVKSVKSVNARSKKLYMLIDLVPAKDITGGPWYTDNEFDHDFVDVLFNHIVKYVRKAKQATLLQIATELQGSGITDEVLQLDEVAQLINALIFDNRLEEVRYKGAVAAAAQTGVQYKVAAAIHSAPNAWTSMPCGLCRVRNQCVEGGNISPQTCIYFKEWL 792
            I D QV++ F + Y  +  +IN L+ D RI++ Q    N L+Y  V +E   +++ ++       E   V   IE+SGN G+WT D+K  T++ +  + K ++ LE RQLVK+VKS++ ++KKLYM+ DLVP++DITGGPWY + EFDHDF+D L N + ++++     TL QI  ++  SGI    L  DE+  ++N LI+D R+EEVR    +A+     V YKV+  + S  +  +  PCG+C V +QC +G  ISP TCIY  +WL
Sbjct:   18 ISDAQVREAFRDEYGKLPAVINELMGDGRIKIFQQG--NNLMYGLVAKEEAERMRGLTYDSGTCVEQRAVLHEIEKSGNTGIWTRDIKTKTNIPEVIIRKTIRLLETRQLVKAVKSISQKNKKLYMMFDLVPSRDITGGPWYNEQEFDHDFIDTLRNFVCQFIKAKGIVTLQQITDKVHESGIAKVSLGPDEMMSILNTLIYDERVEEVR-AARLASGEWRDVSYKVSKEV-SDFDTLSETPCGVCPVFDQCADGNVISPATCIYLTKWL 283          
BLAST of mRNA_P-wetherbeei_contig148.6.1 vs. uniprot
Match: A0A2D4BDY6_PYTIN (DNA-directed RNA polymerase III subunit RPC6 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDY6_PYTIN)

HSP 1 Score: 196 bits (498), Expect = 3.940e-55
Identity = 110/265 (41.51%), Postives = 166/265 (62.64%), Query Frame = 1
Query:    1 IRDNQVKQHF-GERYPNVQDIINRLLKDHRIRLEQDKTTNELVYCYVPEELGGKLKDISSEHMMVYQAIERSGNKGVWTADLKRLTSLAQTQMTKCLKDLEKRQLVKSVKSVNARSKKLYMLIDLVPAKDITGGPWYTDNEFDHDFVDVLFNHIVKYVRKAKQATLLQIATELQGSGITDEVLQLDEVAQLINALIFDNRLEEVRYKGAVAAAAQTGVQYKVAAAIHSAPNAWTSMPCGLCRVRNQCVEGGNISPQTCIYFKEWL 792
            + D +V++ F G  Y  +  +IN L+ + RI+  Q  +   L Y  V  E   ++K ++ E  +V Q IER+GNKGVWT D+K  T++ Q  +TK L+ LE R+LVKSVKS+++++KKLYML DLVP+ +ITGGPWY + EFDH F+D L   + + ++ +  +TL  I  ++  SGI+   L  DE+  +I  L++D R+EEVR    +   A    +YK++  I S  NA +  PCG+C V +QC EG  ISP++C+Y  +WL
Sbjct:   29 LTDAEVREAFAGGEYERLPTVINALMGEGRIKXFQRGSV--LSYGVVGAEEAERIKGLTIEQRLVLQEIERAGNKGVWTRDIKTHTNIPQQIVTKTLRVLESRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGMSTLKAITDKVHASGISKVALGPDEIRSIIQTLMYDGRVEEVRAVR-LTPGANHETKYKISQEI-STFNALSETPCGVCPVFDQCQEGNVISPRSCLYLTKWL 289          
BLAST of mRNA_P-wetherbeei_contig148.6.1 vs. uniprot
Match: A0A4D9CUF8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUF8_9STRA)

HSP 1 Score: 205 bits (522), Expect = 4.640e-55
Identity = 109/266 (40.98%), Postives = 173/266 (65.04%), Query Frame = 1
Query:    1 IRDNQVKQHFGERYPNVQDIINRLLKDHRIRLEQDKTTNELVYCYVPEELGGKLKDISSEHMMVYQAIERSGNKGVWTADLKRLTSLAQTQMTKCLKDLEKRQLVKSVKSVNARSKKLYMLIDLVPAKDITGGPWYTDNEFDHDFVDVLFNHIVKYVRKAKQATLLQIATE-LQGSGITDEVLQLDEVAQLINALIFDNRLEEVRYKGAVAAAAQTGVQ-YKVAAAIHSAPNAWTSMPCGLCRVRNQCVEGGNISPQTCIYFKEWL 792
            +R+ Q+++HF ERY ++  IIN  L ++ IR  + ++ NELVY  V   L  K++++ +E ++VYQ +E++GNKG+W  D++  TSL Q  + K LK+LE RQLVKS  S++++++KLY+L DL PAK+ITGGPWYT++EFDH+F++ L   I  ++++ ++   L I  + ++ SG++   L   EV  +IN+L +D ++E V+     A  +  G   YK++  + +  N +T  PCG C V+ QC EGG ISP  C YF  WL
Sbjct:  377 LRNEQLREHFTERYLHLVPIINSCLAENLIRCMKTES-NELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYLFIKQQRKPPSLGIIVDYVRNSGVSKVELAPGEVQLIINSLAYDMKIEPVQNSLVGALPSSDGTPCYKISRQV-TPLNHFTDFPCGRCPVQAQCEEGGEISPANCRYFNVWL 640          
BLAST of mRNA_P-wetherbeei_contig148.6.1 vs. uniprot
Match: A0A6G0WWY0_9STRA (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWY0_9STRA)

HSP 1 Score: 195 bits (496), Expect = 5.470e-55
Identity = 105/265 (39.62%), Postives = 169/265 (63.77%), Query Frame = 1
Query:    1 IRDNQVKQHFGERYPNVQDIINRLLKDHRIRLEQDKTTNELVYCYVPEELGGKLKDISSEHMMVYQAIERSGNKGVWTADLKRLTSLAQTQMTKCLKDLEKRQLVKSVKSVNARSKKLYMLIDLVPAKDITGGPWYTDNEFDHDFVDVLFNHIVKYVRKAKQATLLQIATELQGSGITDEVLQLDEVAQLINALIFDNRLEEVRYKGAVAAAAQTG-VQYKVAAAIHSAPNAWTSMPCGLCRVRNQCVEGGNISPQTCIYFKEWL 792
            I D +V++ F + Y  +  +IN L+++ RIR+ + +  N L+Y  V +E   +++ +++E + V + IE SGNKG+WT D+K  T++ +  + K +K LE RQL+K+VKS+  +++KLYM  DL P++DITGGPWY + EFDH F+D L + +  +++     TL QI  ++  SGIT   L  DE+  ++N LI++ R+EEVR      A  + G V+YKV+  + S  ++ +  PCG+C V +QC +G  ISP TC+Y  +WL
Sbjct:   18 ISDAKVRETFHDEYAKLPPVINNLMREGRIRIFK-QGANSLMYGLVAKEEAERMRGLTAEQIAVLREIEGSGNKGIWTRDIKTKTNIPEVIIRKTIKILETRQLIKAVKSIAQKNRKLYMKFDLDPSRDITGGPWYNEQEFDHGFIDALRDFVCGFIKAKGVVTLKQITDQVHESGITRVSLGPDEMMSILNTLIYEERVEEVR--AIRIAHGEVGEVKYKVSKDV-SDFDSLSETPCGICPVFDQCADGNIISPATCVYLTKWL 278          
BLAST of mRNA_P-wetherbeei_contig148.6.1 vs. uniprot
Match: A0A0W8DBA8_PHYNI (DNA-directed RNA polymerase III subunit RPC6 n=24 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DBA8_PHYNI)

HSP 1 Score: 195 bits (496), Expect = 6.700e-55
Identity = 108/270 (40.00%), Postives = 169/270 (62.59%), Query Frame = 1
Query:    1 IRDNQVKQHF----GERYPNVQDIINRLLKDHRIRLEQDKTTNELVYCYVPEELGGKLKDISSEHMMVYQAIERSGNKGVWTADLKRLTSLAQTQMTKCLKDLEKRQLVKSVKSVNARSKKLYMLIDLVPAKDITGGPWYTDNEFDHDFVDVLFNHIVKYVRKAKQATLLQIATELQGSGITDEVLQLDEVAQLINALIFDNRLEEVRYKGAVAAAAQTGVQYKVAAAIHSAPNAWTSMPCGLCRVRNQCVEGGNISPQTCIYFKEWLAM 798
            + D +V+ +F    G  Y  + D+IN LL + +I++   K  + L Y  V  E   +++ ++ E  +V Q IER+GNKG+WT D+K  T++ Q  +TK L+ LE R+LVKSVKS+++++KKLYML DLVP+ +ITGGPWY + EFDH F+D L   + + ++ +  +TL  I  ++  SGI+   L  +E+  +I  L++D R+EEVR       +A   V+YKV+  I +  N  +  PCG+C V +QC EG  ISP++C+Y  +WL +
Sbjct:   27 VTDAEVRDYFQAEGGGGYEQLPDVINALLTEGKIKIF--KKGSVLSYGIVDAEEAERIRGLTLEQRLVLQEIERAGNKGIWTRDIKSHTNIPQQIVTKTLRLLETRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGMSTLNAITDKVHASGISKVALGPEEIRSIIQTLMYDGRVEEVR-------SASHEVKYKVSQQITTF-NYLSETPCGVCPVFDQCQEGNVISPRSCLYMTKWLGL 286          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig148.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT94_ECTSI6.520e-6844.77DNA-directed RNA polymerase III subunit RPC6 n=2 T... [more]
A0A1V9ZF30_9STRA2.970e-6340.85DNA-directed RNA polymerase III subunit RPC6 n=2 T... [more]
A0A067BY85_SAPPC1.400e-6040.51DNA-directed RNA polymerase III subunit RPC6 n=2 T... [more]
A0A024U424_9STRA8.570e-5841.29DNA-directed RNA polymerase III subunit RPC6 n=8 T... [more]
A0A7R9U7U3_9STRA1.590e-5739.93DNA-directed RNA polymerase III subunit RPC6 n=1 T... [more]
A0A485KM43_9STRA3.020e-5640.74DNA-directed RNA polymerase III subunit RPC6 n=1 T... [more]
A0A2D4BDY6_PYTIN3.940e-5541.51DNA-directed RNA polymerase III subunit RPC6 n=2 T... [more]
A0A4D9CUF8_9STRA4.640e-5540.98Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6G0WWY0_9STRA5.470e-5539.62DNA-directed RNA polymerase III subunit RPC6 n=1 T... [more]
A0A0W8DBA8_PHYNI6.700e-5540.00DNA-directed RNA polymerase III subunit RPC6 n=24 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig148contigP-wetherbeei_contig148:8403..11450 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LT94
Preferred namePOLR3F
PFAMsRNA_pol_Rpc34
Model size1549
Max annot lvl2759|Eukaryota
KEGG rclassRC02795
KEGG koko:K03025
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko04623,ko05169,map00230,map00240,map01100,map03020,map04623,map05169
KEGG ModuleM00181
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0001817,GO:0001819,GO:0002682,GO:0002684,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005666,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006359,GO:0006383,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030880,GO:0031323,GO:0031326,GO:0031347,GO:0031349,GO:0031974,GO:0031981,GO:0032479,GO:0032481,GO:0032648,GO:0032728,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045088,GO:0045089,GO:0046483,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0051171,GO:0051239,GO:0051240,GO:0051252,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0080134,GO:0090304,GO:0097159,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1903506,GO:1990234,GO:2000112,GO:2001141
Exons5
Evalue1.13e-59
EggNOG OGsCOG5111@1|root,KOG3233@2759|Eukaryota
Descriptiontranscription by RNA polymerase III
Cds size642
COG categoryK
BRITEbr01611,ko00000,ko00001,ko00002,ko03021
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig148.6.1prot_P-wetherbeei_contig148.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig148 8586..10726 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186033.6914105-UTR-P-wetherbeei_contig148:8402..85851683186033.6914105-UTR-P-wetherbeei_contig148:8402..8585Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig148 8403..8585 +
1683186033.76489-UTR-P-wetherbeei_contig148:10726..114501683186033.76489-UTR-P-wetherbeei_contig148:10726..11450Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig148 10727..11450 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186033.709671-CDS-P-wetherbeei_contig148:8585..86001683186033.709671-CDS-P-wetherbeei_contig148:8585..8600Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig148 8586..8600 +
1683186033.717158-CDS-P-wetherbeei_contig148:8829..90041683186033.717158-CDS-P-wetherbeei_contig148:8829..9004Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig148 8830..9004 +
1683186033.7300181-CDS-P-wetherbeei_contig148:9549..96891683186033.7300181-CDS-P-wetherbeei_contig148:9549..9689Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig148 9550..9689 +
1683186033.746578-CDS-P-wetherbeei_contig148:10016..101451683186033.746578-CDS-P-wetherbeei_contig148:10016..10145Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig148 10017..10145 +
1683186033.7564263-CDS-P-wetherbeei_contig148:10543..107261683186033.7564263-CDS-P-wetherbeei_contig148:10543..10726Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig148 10544..10726 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig148.6.1

>prot_P-wetherbeei_contig148.6.1 ID=prot_P-wetherbeei_contig148.6.1|Name=mRNA_P-wetherbeei_contig148.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=214bp
MMVYQAIERSGNKGVWTADLKRLTSLAQTQMTKCLKDLEKRQLVKSVKSV
NARSKKLYMLIDLVPAKDITGGPWYTDNEFDHDFVDVLFNHIVKYVRKAK
QATLLQIATELQGSGITDEVLQLDEVAQLINALIFDNRLEEVRYKGAVAA
AAQTGVQYKVAAAIHSAPNAWTSMPCGLCRVRNQCVEGGNISPQTCIYFK
EWLAMSYSEDDIF*
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mRNA from alignment at P-wetherbeei_contig148:8403..11450+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig148.6.1 ID=mRNA_P-wetherbeei_contig148.6.1|Name=mRNA_P-wetherbeei_contig148.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3048bp|location=Sequence derived from alignment at P-wetherbeei_contig148:8403..11450+ (Phaeothamnion wetherbeei SAG_119_79)
ATCCGCGACAATCAGGTGAAGCAGCACTTCGGCGAGCGCTACCCCAACGT GCAGGACATCATCAACCGGCTGCTCAAGGACCACCGGATCAGGCTCGAGC AGGACAAGACCACCAATGAGCTCGTGTACTGCTATGTTCCCGAAGAGCTG GGCGGCAAACTCAAGGACATTTCTAGCGAGCACATGATGGTGTACCAGGT GAGAACAGCACTTCCGCTCCTCGGTCCGGAACTGGATGCGTGTTGACAGG TTATGAATCTCTCGTCAGTGGTGCTGCGATTCTCTGGCGCTTTCGTCGAC CTCGCAACCAAAACGGGGATTTTGCCCTGCCGTCCTGGCTGGCCCGTTGG CGTCCCGCCATTCTCACTTTCCTGCGCGCGGCACCGTTTCCCGCACCTGG AAACGAAATGCCATGTACGGGCGGCAGGCGATTGAGCGGTCGGGCAACAA GGGCGTGTGGACTGCGGACCTGAAGCGGCTGACGTCGCTGGCGCAGACTC AGATGACGAAGTGCCTCAAGGACCTCGAGAAGCGGCAGCTCGTCAAGTCC GTCAAGTCCGTCAACGCCCGCAGCAAGAAGCTCTACATGCTTATCGACCT CGGTGAGAGAAGAGAGCAGAGGAAGCAGGAGAGAACGAAGCCGGAGAAGG CTGTCGTTATGTTCAAAAAGACAATGTTGAAACCGCCTATATGTCAAAGA GAATTTAGAGGGGGCGGAAAGAGGCCCAGGGCCGGGACCGGTGCTGACCA GTTTAAAGCAAAGACTGGCGGTTGGATGAATGCCTTGTTGGAGCTTGGGT CGCCATTGCCGACGTTTGCCTCCCGCCGCTTCTTGCAGATGGCGGCCCGC CGGATGGGCGTCATCACATCTAGCTCTTTTCTCTTCTTTTCAGGCGCGCA GCGCCTTGCCCTGCCGTTGCTCTGTTTGCACTTTTCTGGCACGCGATGGC ATAAAACATTCGGCTCTCGCCCGCCCCTGCACCTCCCCTTGTTCTTCTTT CTTTTCCATCTTTCCGGCCCTGGGACCTATCCGTCCTAAATCTGTGGTCT ATCGTGACTGCGGCGGAATGTGGTGAACGCCTATCGCGTGGGCGGGCGAC GGACGCGGGCTACGGATGGACCTGGTTTGGCCCGTCTCGTGCGGCAGTGC CGGCGAAAGACATCACGGGAGGCCCGTGGTACACCGACAACGAGTTCGAC CACGACTTCGTCGATGTGCTCTTCAACCACATCGTCAAGTACGTCCGCAA GGCCAAGCAGGCCACGCTCCTGCAGATTGCCACGGAGGTGAGTGGATCTT TCTTTTTCTCTTCAGGTCTGTGGGTATAATCTAGCCGGGTCGCTGGTTCA GTTTTGTTGATGTTTTCACTTCGGGTCTTCGGGCAGAAGCGACCACGCAA ACGCGCGGCAAAAGGTTGTGCTGTGGCAAATCGCTTCGCTTCGCCACCTT CAGTGCCTTCACGCTGCTTAAAGTTTTTCCCTTCCCATGCTATTATTTCT TCTCATTCCCTGCCCTCCCTCCAAGTCCCGGGCGAAAAACATTCATACAT ATACACGCACGCGCACCCTACGAAACCAAAACCCAAAACGGTGGGAAAAA AACAAACAAAACAGCTGCAAGGGTCGGGGATCACGGACGAGGTGCTGCAG TTGGACGAGGTGGCGCAGCTTATCAATGCGCTCATCTTCGATAACCGCCT TGAAGAGGTCCGCTACAAGGGCGCCGTCGCCGCCGCCGCCCAGGTGACTT TGGAGCGATGGACGGGCTGCGGGTTGAAGGGTGACGTGACTGCGGGAATC CTGTCGCTTAGGCGATTGGCGGGCTGTGGCGTTGCCGTTACGGTGCCCCG GAGTGTTAGAGGGTCAGGGACAGAACGAGAGTGGCTCGGCTGAGGGAGGG TAGGCCGGGGAGGAGTTTCGCTTTTCTGGTACATGTGCGAGGCTGGCGGT GTTGGAAATGCCCCGTAGTTTCATCATAGCTCCCGTTACATTTCCTGTGG TCTTATTAATATGTCTCCTTCCTCGCCTTCGCAGCTGCTGCCATCGCTGC CCCGCCCCCGCCGGCCCCCCACCGCCGCCGCCGCCGCTACCACGGCCGCT GCTGTCTTCGACGTATTGCCTCTTCTCGCCGGCTCTTGCAGACTGGCGTC CAGTACAAGGTGGCTGCGGCCATCCACTCGGCGCCCAACGCGTGGACCTC CATGCCGTGCGGGCTCTGCCGGGTGCGGAACCAGTGCGTCGAGGGGGGCA ATATCTCCCCGCAGACGTGCATCTACTTCAAGGAGTGGCTCGCCATGTCG TACAGCGAGGACGACATATTTTGAGGCGGGCAGACTGCGCGCAGGTTACG GGCTGCCAGAGCGCGGGCTGCCGTCAGCCAGCTGGCTGCCCCCGGCCATC AGCCGACTGGCTGCCCCCGGCCGTCAATCGGCTGGTGGCTGCAGGTGACT GGTCTCCCGCCGTCTGCTGCCAGTTGACTCCTGCTGCTGGTGGTCCGAAG CGCGGCAAGCTGAGAGGGCTACGAGCCTACTCAGCTGAGTTGGCCACGCG CAGCTTCGCCTGTTTGACGCCATCAGTCGGGGTTGCATCAAGCTGCTGGA GCCTCTGCGCTCTGGCTACAACGCGGTCGCGCAAAGAAGATCTGGGGCAG CGATAACTGGTGGTTTGTAATTGGCCGTTTCGCGGTACGAACTACTGGCG GGCCAGTGCGAGGAGGCGAAACAACGAGAAATGATGCTGGCGGGTGCATG GAGCATTGGTCACAAGGAGAAAGAGCCATGTATATATTATACCTCTTCCT TCTGCCACTTTCATACTGGTGACTGGTGTCTTCCCGACTGAAAGGCTTTC CGTTGTGCGTTGTTCTTAACGCTACATCGCAGCTGTCCTTCCGCCGCCGA CCTGCGGGGGTTGTCGAGTCCTACGCCACTGGGCCTTACAGGGTTTCGTT AACTACAGAGGAAAAGGCAGAAGCATGCCTTTTGGGGGAGCGTGCTGAGA CGCTCGGCGGCGGCGACAGTCACAACAGCTGAGGCGCCAGCAGCCATG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig148:8403..11450+

>mRNA_P-wetherbeei_contig148.6.1 ID=mRNA_P-wetherbeei_contig148.6.1|Name=mRNA_P-wetherbeei_contig148.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=642bp|location=Sequence derived from alignment at P-wetherbeei_contig148:8403..11450+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATGGTGTACCAGGCGATTGAGCGGTCGGGCAACAAGGGCGTGTGGAC
TGCGGACCTGAAGCGGCTGACGTCGCTGGCGCAGACTCAGATGACGAAGT
GCCTCAAGGACCTCGAGAAGCGGCAGCTCGTCAAGTCCGTCAAGTCCGTC
AACGCCCGCAGCAAGAAGCTCTACATGCTTATCGACCTCGTGCCGGCGAA
AGACATCACGGGAGGCCCGTGGTACACCGACAACGAGTTCGACCACGACT
TCGTCGATGTGCTCTTCAACCACATCGTCAAGTACGTCCGCAAGGCCAAG
CAGGCCACGCTCCTGCAGATTGCCACGGAGCTGCAAGGGTCGGGGATCAC
GGACGAGGTGCTGCAGTTGGACGAGGTGGCGCAGCTTATCAATGCGCTCA
TCTTCGATAACCGCCTTGAAGAGGTCCGCTACAAGGGCGCCGTCGCCGCC
GCCGCCCAGACTGGCGTCCAGTACAAGGTGGCTGCGGCCATCCACTCGGC
GCCCAACGCGTGGACCTCCATGCCGTGCGGGCTCTGCCGGGTGCGGAACC
AGTGCGTCGAGGGGGGCAATATCTCCCCGCAGACGTGCATCTACTTCAAG
GAGTGGCTCGCCATGTCGTACAGCGAGGACGACATATTTTGA
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