mRNA_P-wetherbeei_contig1444.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1444.1.1 vs. uniprot
Match: A0A836CNG6_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNG6_9STRA) HSP 1 Score: 212 bits (540), Expect = 2.080e-55 Identity = 127/222 (57.21%), Postives = 146/222 (65.77%), Query Frame = 2
Query: 1286 RKGLWSVHEIVGEPFEPLVERGDAGRVKLHGAGREDIDVRMLGRGRPFVLELVGCLHGAAAVAAALPALQADVNAATGRNEGGMVEAYDMKVVPRGLYDVMAVEAAEKRKWYCCVVWTSGTVSTERL-VALEAM---TDLKVQQKTPIRVLHRRTLSIREKMIHSMRCERINDHFFVLRLSTSAGTYVKEFVHGDLGRTAPSVGSLLGCRADILQLDVDKVE 1939
R G SV EIV P E L + VKL GAGRED+DVRMLG GRPFVLE++ A +A ALP LQ +VNA TG N G VE D K+V R +Y + A KRK Y CVVWTS VS L AL A DL+V+Q TP+RVLHRR R K + ++R R+ FFVL L+TSAGTYVKEFVHGDLGRT PSVG+LLGCRADILQLDV V+
Sbjct: 454 RIGDASVQEIVAAPLEALARCRE---VKLAGAGREDMDVRMLGNGRPFVLEVIDSKVTAQQLADALPRLQREVNACTGLNSEGAVEVSDFKLVGRDIYSQIQEGAEGKRKHYRCVVWTSRDVSQAELDAALHAHPPGADLEVRQSTPVRVLHRRAALTRVKTVRALRAARVAPRFFVLSLTTSAGTYVKEFVHGDLGRTVPSVGALLGCRADILQLDVVGVD 672
BLAST of mRNA_P-wetherbeei_contig1444.1.1 vs. uniprot
Match: D8LRA8_ECTSI (tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA8_ECTSI) HSP 1 Score: 207 bits (528), Expect = 1.600e-54 Identity = 129/225 (57.33%), Postives = 147/225 (65.33%), Query Frame = 2
Query: 1289 KGLWSVHEIVGEPFEPLVERGDAGRVK--LHGAGREDIDVRMLGRGRPFVLELVGCLHGAAAVAAALPALQADVNAATG-RNEGGMVEAYDMKVVPRGLY--DVMAVEAAEKRKWYCCVVWTSGTVSTERLVAL---EAMTDLKVQQKTPIRVLHRRTLSIREKMIHSMRCERINDHFFVLRLSTSAGTYVKEFVHGDLGRTAPSVGSLLGCRADILQLDVDKVE 1939
KG +SV E V EPF+ +G V+ LHGAGRED+DVRMLG+GRPF LELV L +AA LP+L VN A G +N GG V ++V G DV AV KRK Y CVVW S V E LV +A +L VQQ TPIRVLHRRTL R + I MR E IN+HFF L L+TSAGTY+KEFVHGDLGRT PS+GSLL CRADILQLDV VE
Sbjct: 364 KGFYSVQEAVSEPFQAF-----SGCVEGLLHGAGREDVDVRMLGKGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNAGGGVAVSRLQVSGPGELPSDVQAVGEG-KRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLDCRADILQLDVTNVE 582
BLAST of mRNA_P-wetherbeei_contig1444.1.1 vs. uniprot
Match: A0A6H5KZN5_9PHAE (tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZN5_9PHAE) HSP 1 Score: 211 bits (537), Expect = 2.000e-54 Identity = 149/348 (42.82%), Postives = 171/348 (49.14%), Query Frame = 2
Query: 920 AGGEPPSLEVGVRRESIFIQGRYVKLSREVPQSPWMVDDDAILDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLDSTAVNSCXXXXXRKGLWSVHEIVGEPFEPLVERGDAGRVK--LHGAGREDIDVRMLGRGRPFVLELVGCLHGAAAVAAALPALQADVNAATG-RNEGGMVEAYDMKVVPRGLY--DVMAVEAAEKRKWYCCVVWTSGTVSTERLVAL---EAMTDLKVQQKTPIRVLHRRTLSIREKMIHSMRCERINDHFFVLRLSTSAGTYVKEFVHGDLGRTAPSVGSLLGCRADILQLDVDKVE 1939
+GG EV +RR+SI GRY KLSR VPQ+PW KG +SV E V EPF+ +G V+ LHGAGRED+DVRMLG+GRPF LELV L +AA LP+L VN A G +N GG V ++V G DV AV KRK Y CVVW S V E LV +A +L VQQ TPIRVLHRRTL R + I MR E IN+HFF L L+TSAGTY+KEFVHGDLGRT PS+GSLL CRADILQLDV VE
Sbjct: 534 SGGAEALCEVAIRRKSIHFWGRYTKLSRSVPQTPWF---------------------------------------------------------------------------------------KGFYSVQEAVSEPFQAF-----SGCVEGLLHGAGREDVDVRMLGKGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEG-KRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLDCRADILQLDVTNVE 788
BLAST of mRNA_P-wetherbeei_contig1444.1.1 vs. uniprot
Match: A0A067D9A4_SAPPC (tRNA pseudouridine(55) synthase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D9A4_SAPPC) HSP 1 Score: 201 bits (511), Expect = 5.210e-53 Identity = 116/222 (52.25%), Postives = 143/222 (64.41%), Query Frame = 2
Query: 1286 RKGLWSVHEIVGEPFEPLVERGDAGRVKLHGAGREDIDVRMLGRGRPFVLELVGCLHGAAAVAAALPA-----LQADVNAATGRNEGGMVEAYDMKVVPRGLYDVMAVEAAEKRKWYCCVVWTSGTVSTERLVALEAMTDLKVQQKTPIRVLHRRTLSIREKMIHSMRCERINDHFFVLRLSTSAGTYVKEFVHGDLGRTAPSVGSLLGCRADILQLDVDKV 1936
R G SV E +G+ P+ A K H AGRED+DVRMLG GRPF+LEL+ A A LPA +QA VNAA +VE ++ + + + A KRK YCCVVWTSG ++ ER+ L + DL+V QKTP+RVLHRRTL R K+IH E +NDH+ +LRL+TSAGTYVKEFVHGDLGRT P+V SLLGC ADILQLDV+ +
Sbjct: 270 RMGDSSVEEAIGDIISPVF---GAKSYKFHTAGREDVDVRMLGNGRPFILELLD------AKVATLPADMYATVQAQVNAAN----TDIVEIRELSSATKEGFAALQSGADSKRKTYCCVVWTSGVLTPERVAILNGICDLRVGQKTPVRVLHRRTLLTRPKVIHDASVELLNDHYMLLRLTTSAGTYVKEFVHGDLGRTYPNVASLLGCDADILQLDVENL 478
BLAST of mRNA_P-wetherbeei_contig1444.1.1 vs. uniprot
Match: D0NE04_PHYIT (tRNA pseudouridine(55) synthase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NE04_PHYIT) HSP 1 Score: 198 bits (504), Expect = 3.690e-52 Identity = 175/610 (28.69%), Postives = 273/610 (44.75%), Query Frame = 2
Query: 125 GACWHCLLRTCTGFEGHHEPFEATLEELQSSLRNAGEDLLPTFSELFVPRQKV-CTLCLGLFPVCVVEDAAGSSSSQGDGGLKIVRSCTEVVRASGHKVSSFRLSISLPSSVTVREAAVMHDEEA-LPGSSRGLPVDLKGTLQTALADRLATAL-GVPHNPASDFWIEVTVR--DSAGDLEAACALQLATKDEGNGXXXXXXXXXXXXXXXXWKRQRRQAHPPVEGTFRLSQGAAGKALSKPTAEQKEALRAWHADGVPSIGDRSCGGVAAGGEPPSLEVGVRRESIFIQGRYVKLSREVPQSPWMVDDDAILDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLDSTAVNSCXXXXXRKGLWSVHEIVGEPFEPLVERGDAGRVKLHGAGREDIDVRMLGRGRPFVLELVGCLHGAAAVAAALPALQAD-VNAATGRNEGGMVEAYDMKVVPRGLYDVMAVEAAEKRKWYCCVVWTSGTVSTERLVALEAMTDLKVQQKTPIRVLHRRTLSIREKMIHSMRCERINDHFFVLRLSTSAGTYVKEFVHGDLGRTAPSVGSLLGCRADILQLDVDKV 1936
G C C LR G E + + T E+L ++ + ++ S + P++ V CT C+G+ E KI+ ++ + + V +F L+I LPS V +RE A++ + + R +P D+K L++ LA ++ L S+F + V ++ +SA ++ A+ K + +G R+R + PPV F GA +AL+ T+ E++++ PS + P R+S+++QGRY+K R + Q+PW++D R G SV E +G+ P RG + K H AGRED+DVRMLG GRPF+LE++G A L + D + A G VE +K + + + A K+K YCCVVW+ G ++ E + ++++ DL +QQ+TP+RVLHRRTL R K+IH+ +CE +N H+ +LRL+TSAGTYVKEFVH D GRT P++ S+LGC ADI+QLDV+ +
Sbjct: 24 GVCDRCCLRFA-GVEDS-DVYAYTEEKLADAMNDFIKE-----SGVVEPKEVVGCTCCVGVLNGAFHE--------------KILADVQQLAEEADYDVKAFSLNIKLPSVVLLREYALLKFLRSNVDNFPRKIPFDMKDVLKSLLAPTISRMLKNAECATKSEFAVLVDIKHDESADEVRQIPAI----KKQLDGT-----------------RKRGRGPPPVFDGF----GAVSRALAALTS-MPESIKS-----PPSRLTTA----------PEAAASFERDSVYMQGRYLKFQRGLSQTPWVLDG----------------------------------------------------------------------------------VRMGESSVEECIGDVALPFF-RGSS--YKFHTAGREDVDVRMLGNGRPFILEILG---------AYLSEDEYDQIQKAANDANNGAVEIVQVKSSTKDYFAALQAGADSKKKTYCCVVWSEGELTPEAIAKIDSIQDLTIQQQTPVRVLHRRTLMTRPKIIHAAKCEVLNKHYMLLRLTTSAGTYVKEFVHSDRGRTNPNIASILGCDADIIQLDVESL 477
BLAST of mRNA_P-wetherbeei_contig1444.1.1 vs. uniprot
Match: G4Z6B4_PHYSP (tRNA pseudouridine(55) synthase n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z6B4_PHYSP) HSP 1 Score: 198 bits (503), Expect = 5.790e-52 Identity = 183/624 (29.33%), Postives = 269/624 (43.11%), Query Frame = 2
Query: 95 TPFLEAAARSGACWHCLLRTCTGFEGHHEPFEATLEELQSSLRNAGEDLLPTFSELFVPRQKV--CTLCLGLFPVCVVEDAAGSSSSQGDGGLKIVRSCTEVVRASGHKVSSFRLSISLPSSVTVREAAVMH----DEEALPGSSRGLPVDLKGTLQTALADRLATAL-GVPHNPASDFWIEVTVR--DSAGDLEAACALQLATKDEGNGXXXXXXXXXXXXXXXXWKRQRRQAHPPVEGTFRLSQGAAGKALSKPTAEQKEALRAWHADGVPSIGDRSCGGVAAGGEPPSLEVGVRRESIFIQGRYVKLSREVPQSPWMVDDDAILDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLDSTAVNSCXXXXXRKGLWSVHEIVGEPFEPLVERGDAGRVKLHGAGREDIDVRMLGRGRPFVLELVGCLHGAAAVAAALPALQAD-VNAATGRNEGGMVEAYDMKVVPRGLYDVMAVEAAEKRKWYCCVVWTSGTVSTERLVALEAMTDLKVQQKTPIRVLHRRTLSIREKMIHSMRCERINDHFFVLRLSTSAGTYVKEFVHGDLGRTAPSVGSLLGCRADILQLDVDKV 1936
T L+ A G C C LR + A EE L +A + + L Q+V CT C+G+ E KI+ ++ + + V +F L+I LPS V +RE +++ D E P R +P D+K L++ LA ++ L S+F + + V+ +SA ++ A++ ++ R+R + PPV F GA +AL+ AL + D + S R P R+S+++QGRY+K R + Q+PW++D + R G SV E +G+ P RG K H AGRED+DVRMLG GRPF+LE++ A A L + D + A G VE +K + + + A K+K YCCVVW+ G ++ E + ++A+ DL +QQ+TPIRVLHRRTL R K+IH+ +CE +N H+ +LRL+TSAGTYVKEFVHGD GRT P+V S+LGC ADI+QLDV+ +
Sbjct: 14 TEGLQRARELGVCVRCCLRFA---DIDDSDIYACSEE---KLVDAVHEFVKESGVLGFEPQEVSGCTCCVGVLNGTFHE--------------KILADVQQLADKADYDVKAFSLNIKLPSVVMLREYSLLQFLRSDVENFP---RKMPFDMKDVLKSFLAPSISKMLKNAECANGSEFSVLIDVKHDESADEVRQIPAIKKQLENT---------------------RKRGRGPPPVFDGF----GAVSRALA--------ALGSSMPDTIKSPPARLT-------TEPHAVATFERDSVYMQGRYLKFQRGLSQTPWVLDGE----------------------------------------------------------------------------------RMGESSVEECIGDIALPFF-RGSG--YKFHTAGREDVDVRMLGNGRPFILEILD------AEKAYLDQSEYDQIEKAVNDANNGAVEIVKVKRSTKDYFAGLQTGADSKKKTYCCVVWSEGVLTPELVAKIDAIQDLTIQQQTPIRVLHRRTLMTRPKIIHAAKCEVLNKHYMLLRLTTSAGTYVKEFVHGDRGRTNPNVASILGCDADIIQLDVESL 483
BLAST of mRNA_P-wetherbeei_contig1444.1.1 vs. uniprot
Match: A0A1V9Z0V9_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z0V9_9STRA) HSP 1 Score: 197 bits (502), Expect = 8.150e-52 Identity = 112/217 (51.61%), Postives = 136/217 (62.67%), Query Frame = 2
Query: 1286 RKGLWSVHEIVGEPFEPLVERGDAGRVKLHGAGREDIDVRMLGRGRPFVLELVGCLHGAAAVAAALPALQADVNAATGRNEGGMVEAYDMKVVPRGLYDVMAVEAAEKRKWYCCVVWTSGTVSTERLVALEAMTDLKVQQKTPIRVLHRRTLSIREKMIHSMRCERINDHFFVLRLSTSAGTYVKEFVHGDLGRTAPSVGSLLGCRADILQLDVDKV 1936
R G SV E +G+ P A K H AGRED+DVRMLG GRPF+LEL+ A VA P A V +VE ++ + + + A KRK YCCVVWTSG ++ R+ L + DLKV QKTP+RVLHRRTL R K+IH R E +NDH+ +LRL+TSAGTYVKEFVHGDLGRT P+V SLLGC ADILQLDV+ +
Sbjct: 265 RMGDSSVEEAIGDVIAPEFR---AKSYKFHTAGREDVDVRMLGNGRPFILELLD-----AKVATLSPEAFATVQNRVNAANLDVVEVRELTGATKEGFAALQSGADSKRKTYCCVVWTSGVLTPARVATLNGIVDLKVAQKTPVRVLHRRTLLTRPKVIHDARVEVLNDHYMLLRLTTSAGTYVKEFVHGDLGRTFPNVASLLGCDADILQLDVENL 473
BLAST of mRNA_P-wetherbeei_contig1444.1.1 vs. uniprot
Match: A0A3R7CT38_9STRA (tRNA pseudouridine(55) synthase (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7CT38_9STRA) HSP 1 Score: 189 bits (481), Expect = 8.340e-52 Identity = 106/211 (50.24%), Postives = 137/211 (64.93%), Query Frame = 2
Query: 1298 WSVHEIVGEPFEPLVERGDAGRVKLHGAGREDIDVRMLGRGRPFVLELVGCLHGAAAVAAALPALQADVNAATGRNEGGMVEAYDMKVVPRGLYDVMAVEAAEKRKWYCCVVWTSGTVSTERLVALEAMTDLKVQQKTPIRVLHRRTLSIREKMIHSMRCERINDHFFVLRLSTSAGTYVKEFVHGDLGRTAPSVGSLLGCRADILQLDVD 1930
WS + V + ++ A K H AGRED+DVRMLG GRPF+LEL+G G A VA AL + + NA VE ++ + + V+ A KRK YCCVVW + ++ +R+ L +++DL V QKTP+RVLHRRTL R K+IHS +NDH+ +LRL+TSAGTYVKEFVHGDLGRT P+V +LLGC ADILQLDV+
Sbjct: 28 WSGRQDVDAIGDIVLPHFHAKSYKFHTAGREDVDVRMLGNGRPFILELIG---GRAPVARALRKVN-ETNA-------DRVEIRGFQLTDKKRFSVLQAGADSKRKTYCCVVWVAEKLTPDRVATLNSISDLAVAQKTPVRVLHRRTLLTRPKVIHSANVTVLNDHYMLLRLTTSAGTYVKEFVHGDLGRTLPNVSTLLGCDADILQLDVE 227
BLAST of mRNA_P-wetherbeei_contig1444.1.1 vs. uniprot
Match: UPI000B78FB42 (putative tRNA pseudouridine synthase Pus10 n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B78FB42) HSP 1 Score: 197 bits (501), Expect = 1.970e-51 Identity = 171/565 (30.27%), Postives = 244/565 (43.19%), Query Frame = 2
Query: 281 VCTLCLGLFP-VCVVEDAAGSSSSQGDGGLKIVRSCTEVVRASGHKVSSFRLSISLPSSVTVREAAVM-------HDEEALPGSSRGLPVDLKGTLQTALADRLATALGVPHNPASDFWIEVTVRDSAGDLEAACALQLATKDEGNGXXXXXXXXXXXXXXXXWKRQRRQAHPPVEGTFRLSQGAAGKALSKPTAEQKEALRAWHADGVPSIGDRSCGGVAAGGEPPSLEVGVRRESIFIQGRYVKLSREVPQSPWMVDDDAILDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLDSTAVNSCXXXXXRKGLWSVHEIVGEPFEPLVERGDAGRVKLHGAGREDIDVRMLGRGRPFVLELVGCLHGAAAVAAALPALQADVNAATGRNEGGMVEAYDMKVVPRGLYDVMAVEAAEKRKWYCCVVWTSGTVSTERLVALEAMTDLKVQQKTPIRVLHRRTLSIREKMIHSMRCERIND--HFFVLRLSTSAGTYVKEFVHGDLGRTAPSVGSLLGCRADILQLDVDKVEVN 1945
+C++C G+ VCV E A + + ++ E+V+ GH SF L +S+P + E AV EE + + + +K +L+ ++ + L T LGV +S F + +T S L+ K+ G E F L Q A +KP W G+P+ SLEV I+I GRY+K SR V QS W++DD+ R G SV EIVG PL RGD K H AGREDIDVRMLG GRPF+LE+ + ++ L ++ +N+ EG +V+ ++KVV ++ +M AEK+K Y +VW S + + L+ L + DLK+ Q+TP+RVLHRR+ REK+IH M E+++ FF+L L T AGTY+KEFVHGDLGRT PS+GS+LGCRA+ILQLDV V+++
Sbjct: 83 ICSVCFGILQYVCVDEKQALVNRGCANDFAALIY---ELVKKEGHLADSFSLEVSIPPIIVENENAVRLSMKQKYSSEEWFQETLQSEAISVKDSLKLSIIEPLETLLGVKSG-SSSFRVRLTYTSSETPLKTDNG-----KENNQGSRKLKIGRSEI----------------TENDFNLKQCANNLLEAKPFRPH------WRRSGIPAC---------------SLEVLCSSTPIYIGGRYLKYSRNVSQSRWIIDDE----------------------------------------------------------------------------------RMGEASVEEIVGNSILPLC-RGD--NYKFHAAGREDIDVRMLGSGRPFLLEIQNPRMLPSELS--LKEMEMKINSL----EGKLVKVKNLKVVDEQVWTLMREGEAEKQKQYTALVWISRQLEDKDLMTLSLLKDLKLSQRTPVRVLHRRSPLEREKIIHWMNIEKMSGSTQFFLLHLCTQAGTYIKEFVHGDLGRTYPSLGSILGCRAEILQLDVTDVKMD 510
BLAST of mRNA_P-wetherbeei_contig1444.1.1 vs. uniprot
Match: W2Q7W5_PHYPN (tRNA pseudouridine(55) synthase n=15 Tax=Phytophthora TaxID=4783 RepID=W2Q7W5_PHYPN) HSP 1 Score: 194 bits (493), Expect = 1.350e-50 Identity = 174/607 (28.67%), Postives = 265/607 (43.66%), Query Frame = 2
Query: 131 CWHCLLRTCTGFEGHHEPFEATLEELQSSLRNAGEDLLPTFSELFVPRQKV--CTLCLGLFPVCVVEDAAGSSSSQGDGGLKIVRSCTEVVRASGHKVSSFRLSISLPSSVTVREAAVMHD-EEALPGSSRGLPVDLKGTLQTALADRLATAL-GVPHNPASDFWIEVTVRDSAGDLEAACALQLATKDEGNGXXXXXXXXXXXXXXXXWKRQRRQAHPPVEGTFRLSQGAAGKALSKPTAEQKEALRAWHADGVPSIGDRSCGGVAAGGEPPSLEVGVRRESIFIQGRYVKLSREVPQSPWMVDDDAILDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLDSTAVNSCXXXXXRKGLWSVHEIVGEPFEPLVERGDAGRVKLHGAGREDIDVRMLGRGRPFVLELVGCLHGAAAVAAALPALQAD-VNAATGRNEGGMVEAYDMKVVPRGLYDVMAVEAAEKRKWYCCVVWTSGTVSTERLVALEAMTDLKVQQKTPIRVLHRRTLSIREKMIHSMRCERINDHFFVLRLSTSAGTYVKEFVHGDLGRTAPSVGSLLGCRADILQLDVDKV 1936
C C LR G E E + T EEL ++ + ++ S + V ++V CT C+G+ E KI+ ++ + + V +F L+I LPS V +RE +++ ++ R +P D+K L++ LA ++ L S+F + + ++ E + + EG R+R + PPV F GA +AL+ T E +++ V ++ P+ R+S+++QGRY+K R + Q+PW++D + R G SV E +G+ P RG K H AGRED+DVRMLG GRPF+LE++ A A L + D + A G VE +K + + + A K+K YCCVVW+ G ++ E + ++A+ DL +QQ+TPIRVLHRRTL R K+IH+ +CE +N H+ +LRL+TSAGTYVKEFVHGD GRT P+V S+LG ADI+QLDV+ +
Sbjct: 26 CVRCCLRFA-GIEDS-EVYACTEEELAGAVNDFIKE-----SGVEVESKEVVGCTCCVGVLNSAFHE--------------KILADVQQLSEKANYDVKAFSLNIKLPSVVLLREYSLLKFLRSSVDNFPRKMPFDMKDVLKSFLAPPVSRMLKNAECANKSEFSVLIDIKHDESADEVRQIPAIKKQLEGT-------------------RKRGRGPPPVFDGF----GAVSRALAALTT-MPETIKSPPTP-VTTV--------------PAAVATFERDSVYMQGRYLKFQRGLSQTPWVLDGE----------------------------------------------------------------------------------RMGESSVEECIGDIALPFF-RGSG--YKFHTAGREDVDVRMLGNGRPFILEILN------AKKAYLDQSEYDQIEKAVNDANNGAVEIVQVKSSTKDYFAGLQAGADSKKKTYCCVVWSEGVLTPEAIAKIDAIQDLTIQQQTPIRVLHRRTLMTRPKIIHAAKCEVLNKHYMLLRLTTSAGTYVKEFVHGDRGRTNPNVASILGSDADIIQLDVESL 481 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1444.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1444.1.1 >prot_P-wetherbeei_contig1444.1.1 ID=prot_P-wetherbeei_contig1444.1.1|Name=mRNA_P-wetherbeei_contig1444.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=719bp MEATARSAREVLSSSATPFLEAAARSGACWHCLLRTCTGFEGHHEPFEATback to top mRNA from alignment at P-wetherbeei_contig1444:965..4500+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1444.1.1 ID=mRNA_P-wetherbeei_contig1444.1.1|Name=mRNA_P-wetherbeei_contig1444.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3536bp|location=Sequence derived from alignment at P-wetherbeei_contig1444:965..4500+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1444:965..4500+ >mRNA_P-wetherbeei_contig1444.1.1 ID=mRNA_P-wetherbeei_contig1444.1.1|Name=mRNA_P-wetherbeei_contig1444.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2157bp|location=Sequence derived from alignment at P-wetherbeei_contig1444:965..4500+ (Phaeothamnion wetherbeei SAG_119_79)back to top |