mRNA_P-wetherbeei_contig14057.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14057.1.3 vs. uniprot
Match: Q6K8S4_ORYSJ (Protein FAR1-RELATED SEQUENCE n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q6K8S4_ORYSJ) HSP 1 Score: 102 bits (255), Expect = 7.540e-23 Identity = 50/132 (37.88%), Postives = 75/132 (56.82%), Query Frame = 1
Query: 1 YIEYDVDSERRVTRLFWSYAEQQADGARFTDVIIQDNTFGTNRYGLPLCVFIGEDSNFKTIVLAQALVHKEDTAAFTWAYEHFRDSCCVKGAPPVMFLTDNNKAAASAIKAVVSDSEHFLCMWHMWRNIEKH 396
+ EY+ D R+ RLFWS + + D F DV++ D+T+ NRY LP F+G + + TI+ A+V E A + W + F D C+ P +TD + A AI AV+ DSEH+LC WH+ +N+ +H
Sbjct: 253 FFEYETDEAGRLKRLFWSDPQSRIDYDAFGDVVVFDSTYRVNRYNLPFIPFVGVNHHGSTIIFGCAIVADEKVATYEWILKQFLD--CMYQKHPRALITDGDNAMRRAIAAVMPDSEHWLCTWHIEQNMARH 382
BLAST of mRNA_P-wetherbeei_contig14057.1.3 vs. uniprot
Match: A0A0P0VHJ2_ORYSJ (Protein FAR1-RELATED SEQUENCE n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A0A0P0VHJ2_ORYSJ) HSP 1 Score: 100 bits (250), Expect = 3.560e-22 Identity = 49/132 (37.12%), Postives = 75/132 (56.82%), Query Frame = 1
Query: 1 YIEYDVDSERRVTRLFWSYAEQQADGARFTDVIIQDNTFGTNRYGLPLCVFIGEDSNFKTIVLAQALVHKEDTAAFTWAYEHFRDSCCVKGAPPVMFLTDNNKAAASAIKAVVSDSEHFLCMWHMWRNIEKH 396
+ EY+ D R+ RLFWS + + D F DV++ D+T+ NRY LP +F+G + + T++ A+V E A + W + F D C+ P +TD + A AI AV+ DSEH LC WH+ +N+ +H
Sbjct: 216 FFEYETDEAGRLKRLFWSDPQSRIDYDAFGDVVVFDSTYRVNRYNLPFILFVGVNHHGSTVIFGCAIVADEKVATYEWILKQFLD--CMYQKHPRGLITDGDNAMHRAIAAVMPDSEHRLCTWHIEQNMARH 345
BLAST of mRNA_P-wetherbeei_contig14057.1.3 vs. uniprot
Match: UPI00098ADE8C (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI00098ADE8C) HSP 1 Score: 97.4 bits (241), Expect = 3.790e-21 Identity = 49/132 (37.12%), Postives = 76/132 (57.58%), Query Frame = 1
Query: 1 YIEYDVDSERRVTRLFWSYAEQQADGARFTDVIIQDNTFGTNRYGLPLCVFIGEDSNFKTIVLAQALVHKEDTAAFTWAYEHFRDSCCVKGAPPVMFLTDNNKAAASAIKAVVSDSEHFLCMWHMWRNIEKH 396
+ E+ VD+E R+ LFW ++ + D + DV++ DNT+ NRYG+P F+G +++ T V A A+V E A + W F + C K P +TD + A AI+ V+SD H LC WH+ +N++KH
Sbjct: 256 FFEHTVDAEGRLQNLFWCDSQSRRDYLDYGDVVVFDNTYKMNRYGMPFIPFVGLNNHRCTTVFACAIVSDETEATYVWLLNTFLKANCQKR--PKSVITDGDAAMIRAIRKVLSDVWHRLCSWHIEKNMQKH 385
BLAST of mRNA_P-wetherbeei_contig14057.1.3 vs. uniprot
Match: A0A6P6UIU0_COFAR (Protein FAR1-RELATED SEQUENCE n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6UIU0_COFAR) HSP 1 Score: 96.3 bits (238), Expect = 1.460e-20 Identity = 47/132 (35.61%), Postives = 76/132 (57.58%), Query Frame = 1
Query: 1 YIEYDVDSERRVTRLFWSYAEQQADGARFTDVIIQDNTFGTNRYGLPLCVFIGEDSNFKTIVLAQALVHKEDTAAFTWAYEHFRDSCCVKGAPPVMFLTDNNKAAASAIKAVVSDSEHFLCMWHMWRNIEKH 396
Y + VDSE R++RLFWS + + D F DV++ D+T+ TN+Y PL V G +++F T + A + V +ED A+ W F ++ + G P+ +TD AIK + +++H LC WH+ +N+ H
Sbjct: 259 YFNFTVDSEGRLSRLFWSDSRSREDYRCFGDVLVFDSTYNTNKYLHPLVVMCGINNHFSTSIFACSTVREEDEGAYEWVLNTFLEA--MDGKKPISVVTDGAPQMRKAIKKCLPNTKHRLCCWHLNQNLNSH 388
BLAST of mRNA_P-wetherbeei_contig14057.1.3 vs. uniprot
Match: UPI000989C371 (protein FAR1-RELATED SEQUENCE 5-like n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI000989C371) HSP 1 Score: 93.2 bits (230), Expect = 2.320e-20 Identity = 42/132 (31.82%), Postives = 74/132 (56.06%), Query Frame = 1
Query: 1 YIEYDVDSERRVTRLFWSYAEQQADGARFTDVIIQDNTFGTNRYGLPLCVFIGEDSNFKTIVLAQALVHKEDTAAFTWAYEHFRDSCCVKGAPPVMFLTDNNKAAASAIKAVVSDSEHFLCMWHMWRNIEKH 396
+ +YDVD++ RV +FW+ A + F D + D T+ TN++ +PL VF+G + + ++ + A ALV E +F W ++ F C+ PP+ LTD + +A+K ++ + H LC WH+ + + H
Sbjct: 56 FYDYDVDADNRVRNVFWANASCKGSYEDFGDCVTFDTTYKTNKFHMPLGVFVGVNHHLQSTIFAVALVRDETIPSFEWVFKTFLR--CMNNKPPICMLTDQCSSMKAALKTILPHTLHTLCRWHIMKKYKDH 185
BLAST of mRNA_P-wetherbeei_contig14057.1.3 vs. uniprot
Match: UPI001C15862E (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C15862E) HSP 1 Score: 93.6 bits (231), Expect = 7.400e-20 Identity = 46/131 (35.11%), Postives = 79/131 (60.31%), Query Frame = 1
Query: 1 YIEYDVDSERRVTRLFWSYAEQQADGARFTDVIIQDNTFGTNRYGLPLCVFIGEDSNFKTIVLAQALVHKEDTAAFTWAYEHFRDSCCVKGAPPVMFLTDNNKAAASAIKAVVSDSEHFLCMWHMWRNIEK 393
+IE+ +D E R++RLFW Q A + DVI+ DNT TNRY +PL +F+ D+N ++ ++AQALV E T ++ W E + + ++ P++F+TD + A +AI+ + + C++H+ N+ K
Sbjct: 208 FIEFQLDQENRLSRLFWMSPTQIALWLEYHDVILNDNTMKTNRYNMPLSLFLAIDNNIRSCLIAQALVSDEITESYKWILECTKKATMIE---PLVFVTDTDHAMDAAIEQIYETAYPIHCIFHISENLPK 335
BLAST of mRNA_P-wetherbeei_contig14057.1.3 vs. uniprot
Match: UPI001ABD2DF0 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI001ABD2DF0) HSP 1 Score: 93.6 bits (231), Expect = 1.280e-19 Identity = 43/132 (32.58%), Postives = 73/132 (55.30%), Query Frame = 1
Query: 1 YIEYDVDSERRVTRLFWSYAEQQADGARFTDVIIQDNTFGTNRYGLPLCVFIGEDSNFKTIVLAQALVHKEDTAAFTWAYEHFRDSCCVKGAPPVMFLTDNNKAAASAIKAVVSDSEHFLCMWHMWRNIEKH 396
+ +YDVD++ RV +FW+ A + F D + D T+ TN++ +PL VF+G + + ++ + A ALV E F W ++ F C+ PP+ LTD + +A+K ++ + H LC WH+ R + H
Sbjct: 300 FYDYDVDADNRVRNVFWANASCKGSYEDFGDCVTFDTTYKTNKFHMPLGVFVGVNHHLQSTIFAVALVRDETIPLFEWVFKTFLR--CMNNKPPIFILTDQCSSMKAALKTILPHTLHKLCRWHIMRKYKDH 429
BLAST of mRNA_P-wetherbeei_contig14057.1.3 vs. uniprot
Match: UPI000E6FEA5A (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FEA5A) HSP 1 Score: 93.2 bits (230), Expect = 1.550e-19 Identity = 45/130 (34.62%), Postives = 73/130 (56.15%), Query Frame = 1
Query: 7 EYDVDSERRVTRLFWSYAEQQADGARFTDVIIQDNTFGTNRYGLPLCVFIGEDSNFKTIVLAQALVHKEDTAAFTWAYEHFRDSCCVKGAPPVMFLTDNNKAAASAIKAVVSDSEHFLCMWHMWRNIEKH 396
E V ++ R LFW+ A + D F DV+ D TF TN+YG+P F+G + + +++ AL+ E +F WA++ F + + G P TD +A +AIK V+ D+ H LC++H+++N KH
Sbjct: 50 EVQVGADNRACNLFWADARSKIDYGFFGDVVCFDTTFRTNKYGMPCAPFVGVNHHGMSVLFGMALLVDESAESFVWAFQSFLSA--MSGKHPKTIFTDQAQAIGNAIKEVMPDTHHRLCIFHIYQNAAKH 177
BLAST of mRNA_P-wetherbeei_contig14057.1.3 vs. uniprot
Match: UPI000D62A7BC (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Citrus sinensis TaxID=2711 RepID=UPI000D62A7BC) HSP 1 Score: 92.8 bits (229), Expect = 2.350e-19 Identity = 42/130 (32.31%), Postives = 74/130 (56.92%), Query Frame = 1
Query: 1 YIEYDVDSERRVTRLFWSYAEQQADGARFTDVIIQDNTFGTNRYGLPLCVFIGEDSNFKTIVLAQALVHKEDTAAFTWAYEHFRDSCCVKGAPPVMFLTDNNKAAASAIKAVVSDSEHFLCMWHMWRNIE 390
+ +Y +D E R+ LFW+ + + D + F DV+ D+T+ TN YG PL + +G ++++ T A++ E +TW + F C + P+ +TD ++A AIK VV ++ H LC+W++ RN +
Sbjct: 219 FCKYSIDEENRLANLFWADSIARLDYSYFGDVLAFDSTYKTNEYGKPLVILLGVNNHYATSYFGCAILTDETVETYTWVLKTFL--CAMNNRKPISIVTDGDRAMRKAIKKVVPEARHRLCIWNLQRNAQ 346
BLAST of mRNA_P-wetherbeei_contig14057.1.3 vs. uniprot
Match: UPI000B8B2115 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8B2115) HSP 1 Score: 92.4 bits (228), Expect = 3.240e-19 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 1
Query: 1 YIEYDVDSERRVTRLFWSYAEQQADGARFTDVIIQDNTFGTNRYGLPLCVFIGEDSNFKTIVLAQALVHKEDTAAFTWAYEHFRDSCCVKGAPPVMFLTDNNKAAASAIKAVVSDSEHFLCMWHMWRNIEKH 396
++EY D R+ +LFW + + D F V+ D T+ N Y P V +G + N KT+V AL+ E T +F W + +G P+ +TD ++A A AIK V+ ++ H LC+WH+ RNI+ H
Sbjct: 250 FVEYTQDEHERLDKLFWCDGQSRNDYKAFGHVLAFDTTYKCNAYRKPFVVLVGVNHNRKTVVFGCALIVDEKTESFVWVLNQMIKAG--EGFKPLTVITDGDRAMACAIKEVLPEARHRLCLWHLMRNIQGH 379 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14057.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14057.1.3 >prot_P-wetherbeei_contig14057.1.3 ID=prot_P-wetherbeei_contig14057.1.3|Name=mRNA_P-wetherbeei_contig14057.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=132bp YIEYDVDSERRVTRLFWSYAEQQADGARFTDVIIQDNTFGTNRYGLPLCVback to top mRNA from alignment at P-wetherbeei_contig14057:62..656+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14057.1.3 ID=mRNA_P-wetherbeei_contig14057.1.3|Name=mRNA_P-wetherbeei_contig14057.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=595bp|location=Sequence derived from alignment at P-wetherbeei_contig14057:62..656+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14057:62..656+ >mRNA_P-wetherbeei_contig14057.1.3 ID=mRNA_P-wetherbeei_contig14057.1.3|Name=mRNA_P-wetherbeei_contig14057.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig14057:62..656+ (Phaeothamnion wetherbeei SAG_119_79)back to top |