mRNA_P-wetherbeei_contig14044.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14044.1.1 vs. uniprot
Match: A0A813A6K2_SYMMI (OXA1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813A6K2_SYMMI) HSP 1 Score: 119 bits (298), Expect = 1.170e-31 Identity = 61/126 (48.41%), Postives = 86/126 (68.25%), Query Frame = 1
Query: 16 SLIFSQLPVFASFFFGLQKMGEFVPAFSHGGALWFPDLAAADPTGTLPVLTGVTFLIMAEVSADASVT-GGAWARLMLRVLSIAMVPLTYQTASGVFLYWLTSNACSIVQALVMKRPAVRAALDIP 390
+L F QLP+F S FFG+++MG + P FS GG WF DLAAADP LP++ ++FL+M E+++D T ++++R LS+A+VPLTY SGVF+YW T+N S+VQ V+K AV + DIP
Sbjct: 3 ALPFIQLPIFVSLFFGIKQMGTYCPGFSSGGTAWFTDLAAADPYMVLPIINALSFLLMFEMNSDGFQTQDNDTFKMVMRGLSVAIVPLTYAMPSGVFVYWCTNNMLSMVQGKVLKTDAVASYFDIP 128
BLAST of mRNA_P-wetherbeei_contig14044.1.1 vs. uniprot
Match: A0A7S3XMS5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMS5_HETAK) HSP 1 Score: 113 bits (283), Expect = 5.150e-27 Identity = 63/130 (48.46%), Postives = 81/130 (62.31%), Query Frame = 1
Query: 28 SQLPVFASFFFGLQKMGEFVPAFSHGGALWFPDLAAADPTGTLPVLTGVTFLIMAEVSADASVTG--GAWARLMLRVLSIAMVPLTYQTASGVFLYWLTSNACSIVQALVMKRPAVRAALDIPIVPERLK 411
+QLP+F S FFGL+KMGE+V S GGA WF DLA AD T LP +FL M E+ AD G A + ++RV+ +AM+PLT V LYW TSNA ++ QAL ++ P +AAL IP VP L+
Sbjct: 200 TQLPIFMSAFFGLRKMGEYVDI-SQGGAYWFTDLAVADATYILPAACSASFLAMVELGADGMNQGPNAATMKTVMRVMGVAMLPLTVNIPQSVLLYWCTSNAYAMAQALALRAPGAKAALGIPEVPPHLR 328
BLAST of mRNA_P-wetherbeei_contig14044.1.1 vs. uniprot
Match: A0A7S3XPC4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPC4_HETAK) HSP 1 Score: 110 bits (274), Expect = 1.200e-25 Identity = 59/132 (44.70%), Postives = 85/132 (64.39%), Query Frame = 1
Query: 25 FSQLPVFASFFFGLQKMGEFVPAFSHGGALWFPDLAAADPTGTLPVLTGVTFLIMAEVSADASVTGGAWARLM---LRVLSIAMVPLTYQTASGVFLYWLTSNACSIVQALVMKRPAVRAALDIPIVPERLK 411
F QLP+F S FFGL++MG P + GG DL AADPT LPV+TG FL M E+ A + R + +R +++A +TYQ +GVF+YW+TSNA +++Q++ +K P ++AALDIP +PE +K
Sbjct: 252 FLQLPLFVSVFFGLKEMGTHFPGLATGGLGPVLDLTAADPTFVLPVVTGALFLGMVELGGGADMPQTPTTRQLKWFMRAMAVATPVMTYQFPAGVFVYWMTSNAFTLMQSVALKNPTIKAALDIPEIPESIK 383
BLAST of mRNA_P-wetherbeei_contig14044.1.1 vs. uniprot
Match: A0A1Y1Y304_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y304_9FUNG) HSP 1 Score: 105 bits (263), Expect = 2.760e-24 Identity = 58/135 (42.96%), Postives = 83/135 (61.48%), Query Frame = 1
Query: 7 RRCSLIFSQLPVFASFFFGLQKMGEF-VPAFSHGGALWFPDLAAADPTGTLPVLTGVTFLIMAEVSADASVTGGAWARL--MLRVLSIAMVPLTYQTASGVFLYWLTSNACSIVQALVMKRPAVRAALDIPIVPE 402
+ +L Q PV SFFF L+ M + VP F GG WF DL AADP LPV++G+ FL + E+ ++A G + R +++AMVP+T AS +F+YW+TSNA SI Q L +K PA+R ++ IP++ E
Sbjct: 240 KMLALPLMQAPVMLSFFFALRDMAQLPVPQFQTGGTAWFTDLTAADPLYILPVVSGLGFLAILELGSEAGTNVGQTKNVKWFFRFMAVAMVPVTANFASSIFVYWVTSNAFSIGQVLTLKNPAIRKSMGIPLLME 374
BLAST of mRNA_P-wetherbeei_contig14044.1.1 vs. uniprot
Match: A0A1Y1ICP8_KLENI (Cytochrome oxidase biogenesis protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ICP8_KLENI) HSP 1 Score: 105 bits (263), Expect = 2.820e-24 Identity = 56/129 (43.41%), Postives = 78/129 (60.47%), Query Frame = 1
Query: 25 FSQLPVFASFFFGLQKMGEFVPAFSHGGALWFPDLAAADPTGTLPVLTGVTFLIMAEVSADASVTGGAWARLM---LRVLSIAMVPLTYQTASGVFLYWLTSNACSIVQALVMKRPAVRAALDIPIVPE 402
F+Q P+F FF +++M E +P+F GG WF DL+ ADPT LP + TFLI EV A + G A+ M +RVL +AMVPLT +F YW+ SN S++Q+ ++K P V+ AL IP + E
Sbjct: 225 FAQAPLFIGFFLAIRRMSENLPSFKEGGLFWFTDLSGADPTYLLPTICAATFLITVEVGAMEGMQGQPMAKTMKMAMRVLGVAMVPLTMSFEKALFCYWIPSNLFSLLQSSLLKVPKVKEALGIPTLNE 353
BLAST of mRNA_P-wetherbeei_contig14044.1.1 vs. uniprot
Match: A0A662YKN5_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YKN5_9STRA) HSP 1 Score: 101 bits (252), Expect = 5.840e-24 Identity = 50/124 (40.32%), Postives = 78/124 (62.90%), Query Frame = 1
Query: 28 SQLPVFASFFFGLQKMGEFVPAFSHGGALWFPDLAAADPTGTLPVLTGVTFLIMAEVSADASVTGGAWARLM--LRVLSIAMVPLTYQTASGVFLYWLTSNACSIVQALVMKRPAVRAALDIPI 393
SQ+PVF FF+GLQ + ++ P ++H G W PDL+ ADPT LPV++ + E+ D S+TG +L +R+ ++AM+PLT SG+F+YW+TSN ++ Q M+ V+ A +IP+
Sbjct: 53 SQIPVFLGFFWGLQNISQYFPDYAHEGVAWVPDLSVADPTMALPVISSALMVASVELGGD-SLTGEMQDKLKFGMRMFALAMIPLTMNFQSGIFVYWVTSNMFTLTQTAAMRLHVVKRAFNIPV 175
BLAST of mRNA_P-wetherbeei_contig14044.1.1 vs. uniprot
Match: A0A8C2SU16_COTJA (OXA1L mitochondrial inner membrane protein n=2 Tax=Coturnix japonica TaxID=93934 RepID=A0A8C2SU16_COTJA) HSP 1 Score: 103 bits (256), Expect = 2.910e-23 Identity = 58/139 (41.73%), Postives = 85/139 (61.15%), Query Frame = 1
Query: 31 QLPVFASFFFGLQKMGEF-VPAFSHGGALWFPDLAAADPTGTLPVLTGVTFLIMAEVSADASVTG---GAWARLMLRVLSIAMVPLTYQTASGVFLYWLTSNACSIVQALVMKRPAVRAALDIPIVPERLKKEAAAASP 435
Q P+F SFF LQ+M VP F HGGA W DL+ DPT LP+L+ T ++ E ++ V+ GA R++LR+L + +P+T + +F+YWLTSN+ S++QAL+++ P VR+AL IP +P E A P
Sbjct: 207 QTPIFISFFLALQQMAALPVPGFQHGGAGWINDLSCPDPTYALPLLSSATMWMVLEAGVESGVSSPQAGA-VRVVLRLLPLLFLPMTIHFPAAIFVYWLTSNSFSLLQALLLRVPVVRSALRIPALPHNPPMEPNGAGP 344
BLAST of mRNA_P-wetherbeei_contig14044.1.1 vs. uniprot
Match: A0A7S4E290_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E290_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.290e-23 Identity = 61/144 (42.36%), Postives = 87/144 (60.42%), Query Frame = 1
Query: 28 SQLPVFASFFFGLQKMGEFVPA-FSHGGALWFPDLAAADPTGTLPVLTGVTFLIMAEVSAD-----ASVTGGAWARLMLRVLSIAMVPLTYQTASGVFLYWLTSNACSIVQALVMKR-PAVRAALDIPIVPERLKKEAAAASPM 438
+QLPVF S FFGL++ E PA + GG LWFPDL+ ADPT LP++T FL+M EV AD A+ + ++R + + MVP TY + VF YW+++NA S+ Q +++ + P VR AL +PIV + K A P+
Sbjct: 189 AQLPVFMSMFFGLRRAAESFPAECASGGMLWFPDLSVADPTYALPLITSGLFLVMIEVGADGMNASANKDQAKTMKNVMRGMGVLMVPFTYHFPASVFCYWVSANAFSLGQTVLLNKVPGVREALGVPIVQTQSKVRKPTAPPV 332
BLAST of mRNA_P-wetherbeei_contig14044.1.1 vs. uniprot
Match: UPI001C67F381 (mitochondrial inner membrane protein OXA1L-like n=1 Tax=Lagopus leucura TaxID=30410 RepID=UPI001C67F381) HSP 1 Score: 99.4 bits (246), Expect = 6.210e-23 Identity = 55/124 (44.35%), Postives = 78/124 (62.90%), Query Frame = 1
Query: 31 QLPVFASFFFGLQKMGEF-VPAFSHGGALWFPDLAAADPTGTLPVLTGVTFLIMAEVSADASVTG---GAWARLMLRVLSIAMVPLTYQTASGVFLYWLTSNACSIVQALVMKRPAVRAALDIP 390
Q PVF SFF LQ+M VP GG W DL++ DPT +P+LT T ++ E A++ V+ GA R +LRVL + +P+T + +F+YWLTSN S++QAL+++ PAVR+AL IP
Sbjct: 84 QTPVFVSFFLALQQMAAVPVPGLKGGGVAWISDLSSPDPTYAMPLLTSATMWMVLEAGAESGVSSPHAGA-VRAVLRVLPLVFLPMTVHFPAAIFVYWLTSNTFSLLQALLLRLPAVRSALRIP 206
BLAST of mRNA_P-wetherbeei_contig14044.1.1 vs. uniprot
Match: A0A5D6XG61_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XG61_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.090e-22 Identity = 54/133 (40.60%), Postives = 82/133 (61.65%), Query Frame = 1
Query: 28 SQLPVFASFFFGLQKMGEFVPAFSHGGALWFPDLAAADPTGTLPVLTGVTFLIMAEVSADA-------SVTGGAWARLMLRVLSIAMVPLTYQTASGVFLYWLTSNACSIVQALVMKRPAVRAALDIPIVPER 405
+Q+PVF FF+GLQ + ++ P +S G LWF DL+ ADPT LPV++ V + E+ DA VT G +R L++AMVP+T +SG+F+YW++SN ++VQ ++ AV+ AL IP++ R
Sbjct: 199 TQIPVFLGFFWGLQSIAKYFPEYSTEGTLWFQDLSLADPTMALPVISSVLMVASVELGGDALPEEYREKVTFG------MRALAVAMVPITMNFSSGIFVYWVSSNLFTVVQTGALRINAVKRALKIPVIETR 325 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14044.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14044.1.1 >prot_P-wetherbeei_contig14044.1.1 ID=prot_P-wetherbeei_contig14044.1.1|Name=mRNA_P-wetherbeei_contig14044.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp LFRRCSLIFSQLPVFASFFFGLQKMGEFVPAFSHGGALWFPDLAAADPTGback to top mRNA from alignment at P-wetherbeei_contig14044:413..1467- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14044.1.1 ID=mRNA_P-wetherbeei_contig14044.1.1|Name=mRNA_P-wetherbeei_contig14044.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1055bp|location=Sequence derived from alignment at P-wetherbeei_contig14044:413..1467- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14044:413..1467- >mRNA_P-wetherbeei_contig14044.1.1 ID=mRNA_P-wetherbeei_contig14044.1.1|Name=mRNA_P-wetherbeei_contig14044.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig14044:413..1467- (Phaeothamnion wetherbeei SAG_119_79)back to top |