mRNA_P-wetherbeei_contig13935.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13935.1.1 vs. uniprot
Match: D8UCE8_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UCE8_VOLCA) HSP 1 Score: 77.0 bits (188), Expect = 2.950e-14 Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = 1
Query: 1 KLLQQMRAYRAGVAPFDVMVCESRCHGAVRAWWIQVGQCPGGDIISKLAIVLLDVVPHAAAPERTFSLLGWLQSERRNRMDVATVGALAAIK 276
+L+ Q+ Y A PFD+ S +R WW+ + P D+I+++A+ +LD+VPHAA+ ERTFS++GW Q +R NR TV + IK
Sbjct: 94 RLVSQLVVYNARQEPFDLPPNGSSFDD-LRLWWLSMLPLPSADMIAQVALTILDIVPHAASMERTFSIMGWFQDKRSNRFKDETVKKMTTIK 184
BLAST of mRNA_P-wetherbeei_contig13935.1.1 vs. uniprot
Match: A0A0U9HKN3_KLENI (BED-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HKN3_KLENI) HSP 1 Score: 72.4 bits (176), Expect = 1.740e-12 Identity = 35/102 (34.31%), Postives = 63/102 (61.76%), Query Frame = 1
Query: 1 KLLQQMRAYRAGVAPFDVMVCESRCHGAVRAWWIQVGQCPGGDIISKLAIVLLDVVPHAAAPERTFSLLGWLQSERRNRMDVATVGALAAIKMHHVQGEAPR 306
+L+ +M Y+AG PF +++ +R WW Q + + ++ LA+++ D+VPHA ER FS++GW+Q+++RNR+ T+ +A +K+ H Q + PR
Sbjct: 423 QLMHEMVMYKAGEGPFGLVIAPETFD--LRLWW-QTVRNKQYNTLAALALIIADIVPHAGDIERVFSMMGWMQNDKRNRLGTGTLELMAKVKVFH-QVQKPR 520
BLAST of mRNA_P-wetherbeei_contig13935.1.1 vs. uniprot
Match: E3KU84_PUCGT (DUF659 domain-containing protein n=1 Tax=Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) TaxID=418459 RepID=E3KU84_PUCGT) HSP 1 Score: 61.2 bits (147), Expect = 1.420e-8 Identity = 31/87 (35.63%), Postives = 53/87 (60.92%), Query Frame = 1
Query: 94 WWIQVGQCPGGDIISKLAIVLLDVVPHAAAPERTFSLLGWLQSERRNRMDVATVGALAAIKMHHVQGE---APRLLARARDMPPPSK 345
+W+ V P + + K+AI +L++VPHAA E FS + ++++ RNRM T+ LA +K+H ++G+ APR R ++ P S+
Sbjct: 334 YWLMVPNTPESNALKKVAIGILEIVPHAAGVEGLFSTMSAIKTKARNRMSPKTLKMLAQLKLHLLEGDRLLAPRRQRRQKNATPDSE 420
BLAST of mRNA_P-wetherbeei_contig13935.1.1 vs. uniprot
Match: A0A2N5S5Q1_9BASI (Uncharacterized protein n=1 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5S5Q1_9BASI) HSP 1 Score: 59.7 bits (143), Expect = 3.510e-8 Identity = 36/111 (32.43%), Postives = 59/111 (53.15%), Query Frame = 1
Query: 4 LLQQMRAYRAGVAPFDVMVCESRCHGAVRAWWIQVGQCPGGDIISKLAIVLLDVVPHAAAPERTFSLLGWLQSERRNRMDVATVGALAAIKMHHVQGE---APRLLARARD 327
L M Y + P+D E A+W++V P ++ KLAI +L++VPHAA E FS++ ++++ RN+M T+ A +K+H +QG+ PR R +D
Sbjct: 104 LQDAMNRYYNSLFPYDSKKKEDPL-----AFWLKVPYTPKLALLKKLAIEILEIVPHAAGVEGLFSMMNAIKTKTRNQMSPNTLKMTAQLKLHLLQGDPLLVPRKKRRQKD 209
BLAST of mRNA_P-wetherbeei_contig13935.1.1 vs. uniprot
Match: A0A2N5W988_9BASI (Uncharacterized protein n=1 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5W988_9BASI) HSP 1 Score: 59.7 bits (143), Expect = 4.480e-8 Identity = 36/111 (32.43%), Postives = 59/111 (53.15%), Query Frame = 1
Query: 4 LLQQMRAYRAGVAPFDVMVCESRCHGAVRAWWIQVGQCPGGDIISKLAIVLLDVVPHAAAPERTFSLLGWLQSERRNRMDVATVGALAAIKMHHVQGE---APRLLARARD 327
L M Y + P+D E A+W++V P ++ KLAI +L++VPHAA E FS++ ++++ RN+M T+ A +K+H +QG+ PR R +D
Sbjct: 164 LQDAMNRYYNSLFPYDSKKKEDPL-----AFWLKVPYTPKLALLKKLAIEILEIVPHAAGVEGLFSMMNAIKTKTRNQMSPNTLKMTAQLKLHLLQGDPLLVPRKKRRQKD 269
BLAST of mRNA_P-wetherbeei_contig13935.1.1 vs. uniprot
Match: E3KYW8_PUCGT (Uncharacterized protein n=1 Tax=Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) TaxID=418459 RepID=E3KYW8_PUCGT) HSP 1 Score: 59.3 bits (142), Expect = 6.690e-8 Identity = 34/108 (31.48%), Postives = 59/108 (54.63%), Query Frame = 1
Query: 4 LLQQMRAYRAGVAPFDVMVCESRCHGAVRAWWIQVGQCPGGDIISKLAIVLLDVVPHAAAPERTFSLLGWLQSERRNRMDVATVGALAAIKMHHVQGEAPRLLARARD 327
L + Y + P++ H +W+ V P + + KLAI +L++VPHAA E FS++ ++++ RNR+ T+ +A IK+H +QG+ P L AR ++
Sbjct: 288 LRDAVHRYYNAIYPYNSKTISKPLH-----YWLTVPYTPESESLKKLAIGILEIVPHAAGVEGLFSMMTAMKTKSRNRILPNTLKMMAQIKLHLLQGD-PLLAARRKN 389
BLAST of mRNA_P-wetherbeei_contig13935.1.1 vs. uniprot
Match: A0A015M5S5_RHIIW (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015M5S5_RHIIW) HSP 1 Score: 58.5 bits (140), Expect = 6.810e-8 Identity = 31/96 (32.29%), Postives = 53/96 (55.21%), Query Frame = 1
Query: 4 LLQQMRAYRAGVAPFDVMVCESRCHGAVRAWWIQVGQCPGGDI-ISKLAIVLLDVVPHAAAPERTFSLLGWLQSERRNRMDVATVGALAAIKMHHV 288
L+ Q++++ +++ SR G V WWI + I KLA+ +L + PH A ER FS+LGW ++RR+R+ V + A+A + H++
Sbjct: 124 LISQIQSFYLKKEEYNIPYSASR--GDVLTWWILCNPVRNEENHIQKLALKILAITPHNAGCERVFSVLGWFANQRRSRLKVEKLEAMAKLHTHYI 217
BLAST of mRNA_P-wetherbeei_contig13935.1.1 vs. uniprot
Match: E3KDS3_PUCGT (DUF659 domain-containing protein n=1 Tax=Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) TaxID=418459 RepID=E3KDS3_PUCGT) HSP 1 Score: 59.3 bits (142), Expect = 6.990e-8 Identity = 29/74 (39.19%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 94 WWIQVGQCPGGDIISKLAIVLLDVVPHAAAPERTFSLLGWLQSERRNRMDVATVGALAAIKMHHVQGEAPRLLA 315
+W+ V P + + K+AI +L++VPHAA E FS + ++++ RNRM T+ LA +K+H ++G+ RLLA
Sbjct: 552 YWLMVPDTPESNALKKVAIGVLEIVPHAAGVEGLFSTMSAIKTKSRNRMSPTTLKMLAQLKLHLLEGD--RLLA 623
BLAST of mRNA_P-wetherbeei_contig13935.1.1 vs. uniprot
Match: U9SPW4_RHIID (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=U9SPW4_RHIID) HSP 1 Score: 58.9 bits (141), Expect = 8.680e-8 Identity = 31/96 (32.29%), Postives = 53/96 (55.21%), Query Frame = 1
Query: 4 LLQQMRAYRAGVAPFDVMVCESRCHGAVRAWWIQVGQCPGGDI-ISKLAIVLLDVVPHAAAPERTFSLLGWLQSERRNRMDVATVGALAAIKMHHV 288
L+ Q++++ +++ SR G V WWI + I KLA+ +L + PH A ER FS+LGW ++RR+R+ V + A+A + H++
Sbjct: 124 LISQIQSFYLKKEEYNIPYSASR--GDVLTWWILYNSVHSEENHIQKLALKILAITPHNAGCERVFSVLGWFANQRRSRLKVEKLEAMAKLHTHYI 217
BLAST of mRNA_P-wetherbeei_contig13935.1.1 vs. uniprot
Match: A0A180GVA7_PUCT1 (DUF659 domain-containing protein n=1 Tax=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) TaxID=630390 RepID=A0A180GVA7_PUCT1) HSP 1 Score: 58.9 bits (141), Expect = 9.270e-8 Identity = 27/68 (39.71%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 94 WWIQVGQCPGGDIISKLAIVLLDVVPHAAAPERTFSLLGWLQSERRNRMDVATVGALAAIKMHHVQGE 297
+W+ V + + KLAI LL +VPHAA ER FS++ ++++ RNRM T+ ++ IK+H +QG+
Sbjct: 478 YWLMVPHSLDSESLKKLAIGLLQIVPHAAGVERLFSMMAAMKTKTRNRMSPNTLKMMSQIKLHLLQGD 545 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13935.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13935.1.1 >prot_P-wetherbeei_contig13935.1.1 ID=prot_P-wetherbeei_contig13935.1.1|Name=mRNA_P-wetherbeei_contig13935.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp MRAYRAGVAPFDVMVCESRCHGAVRAWWIQVGQCPGGDIISKLAIVLLDVback to top mRNA from alignment at P-wetherbeei_contig13935:1309..1653- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13935.1.1 ID=mRNA_P-wetherbeei_contig13935.1.1|Name=mRNA_P-wetherbeei_contig13935.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig13935:1309..1653- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13935:1309..1653- >mRNA_P-wetherbeei_contig13935.1.1 ID=mRNA_P-wetherbeei_contig13935.1.1|Name=mRNA_P-wetherbeei_contig13935.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig13935:1309..1653- (Phaeothamnion wetherbeei SAG_119_79)back to top |