mRNA_P-wetherbeei_contig13908.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13908.1.1 vs. uniprot
Match: UPI00198B6C79 (Flavin reductase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI00198B6C79) HSP 1 Score: 207 bits (526), Expect = 1.350e-65 Identity = 100/160 (62.50%), Postives = 117/160 (73.12%), Query Frame = 1
Query: 19 MDPVDIKQFTTAMRRAATPVSVVTTEGPGGRFGVTVSSICTASAEPPQVLVCVHLGGPTPVALRANKCFAVNILDSRHRHVADSFAGRIERWRQDRFACDAWNTIATGAPVLSDGLLVLDCELTQELVVSTHAVFVGLVVGLQSREGAPLLYSDQAYRTL 498
M D F AMRRAAT VSVVTT+GPGGR GVTVSS CTA+A+PPQ+L CV GP A+RAN+ F VN+LD HRHVADSFAGR+ERWR DRFACD W T+ATGAPVL G++ LDC L E +STH VF+G V + EG+PLLY+D YR +
Sbjct: 1 MSQFDPNLFKLAMRRAATAVSVVTTDGPGGRVGVTVSSFCTATADPPQMLACVGKSGPAAAAIRANRVFCVNVLDRVHRHVADSFAGRVERWRNDRFACDQWKTLATGAPVLDHGMIALDCTLIHETELSTHFVFIGHVESVAVNEGSPLLYADAHYRRM 160
BLAST of mRNA_P-wetherbeei_contig13908.1.1 vs. uniprot
Match: J3CC52_9BURK (Conserved protein of DIM6/NTAB family n=2 Tax=Herbaspirillum sp. YR522 TaxID=1144342 RepID=J3CC52_9BURK) HSP 1 Score: 159 bits (403), Expect = 9.030e-47 Identity = 80/152 (52.63%), Postives = 100/152 (65.79%), Query Frame = 1
Query: 43 FTTAMRRAATPVSVVTTEGPGGRFGVTVSSICTASAEPPQVLVCVHLGGPTPVALRANKCFAVNILDSRHRHVADSFAGRIERWRQDRFACDAWNTIATGAPVLSDGLLVLDCELTQELVVSTHAVFVGLVVGLQSREGAPLLYSDQAYRTL 498
F AMR A V+VVTT+GPGGR GVTVS++C+ SA+PP VLVC+H P +R N F VN+L + HVADSFAGRI +WR DRFAC W T A+GAPVL L LDC L +++ +THAV +G V + LLY D+AYR +
Sbjct: 21 FLDAMRHTAASVAVVTTDGPGGRAGVTVSAVCSLSADPPSVLVCIHEKSPVLDIIRRNASFCVNLLGADQSHVADSFAGRIPKWRADRFACADWETAASGAPVLRQALASLDCSLARDVHHATHAVLIGEVGAIHMAPRDGLLYVDRAYRCI 172
BLAST of mRNA_P-wetherbeei_contig13908.1.1 vs. uniprot
Match: A0A7Z0MBP6_9BURK (Flavin reductase n=1 Tax=Alcaligenaceae bacterium TaxID=2021368 RepID=A0A7Z0MBP6_9BURK) HSP 1 Score: 150 bits (379), Expect = 2.970e-43 Identity = 78/156 (50.00%), Postives = 99/156 (63.46%), Query Frame = 1
Query: 22 DPVDIKQFTTAMRRAATPVSVVTTEGPGGRFGVTVSSICTASAEPPQVLVCVHLGGPTPVALRANKCFAVNILDSRHRHVADSFAGRIERWRQDRFACDAWNTIATGAPVLSDGLLVLDCELTQELVVSTHAVFVGLVVGLQSREGAPLLYSDQAY 489
D VD F AMR A + V+VVTT+GP GR G+T+S++C+ SA+PP VLVC++ P ++AN F VN+L HR VAD FAGRI R DRFAC W ATGAP L D L LDCEL ++H V +G VV L+ R PL+Y D++Y
Sbjct: 6 DAVDRAAFLEAMRCAVSSVTVVTTDGPAGRAGLTISAMCSLSADPPAVLVCINRLSPVLGIIQANGNFCVNLLGLEHRKVADVFAGRIPALRNDRFACAQWERGATGAPALVDALTALDCELVSHTSFASHEVLIGRVVDLRMRHQDPLIYVDRSY 161
BLAST of mRNA_P-wetherbeei_contig13908.1.1 vs. uniprot
Match: A0A4D7BKA5_9HYPH (Flavin reductase n=2 Tax=Phreatobacter stygius TaxID=1940610 RepID=A0A4D7BKA5_9HYPH) HSP 1 Score: 146 bits (368), Expect = 9.560e-42 Identity = 75/161 (46.58%), Postives = 97/161 (60.25%), Query Frame = 1
Query: 19 MDPVDIKQFTTAMRRAATPVSVVTTEGPGGRFGVTVSSICTASAEPPQVLVCVHLGGPTPVALRANKCFAVNILDSRHRHVADSFAGRIERWRQDRFACDAWNTIATGAPVLSDGLLVLDCELTQELVVSTHAVFVGLVVGLQSREGAPLLYSDQAYRTLE 501
M PVD +F AMR + V+VVTT+GP GR G+TVS++C+ S EPP V+VC+H + L N FA N L HVAD+FAG + R DRFA AW+ + TGAPVL L DC + +H + VG V+GL APL+YSD+AYR L+
Sbjct: 1 MAPVDGARFREAMRLTVSGVAVVTTDGPHGRGGMTVSTLCSLSMEPPSVVVCIHAANRSLQTLIDNGVFAANALADGQEHVADTFAGLVAALRDDRFAAGAWSVLGTGAPVLDGALCSFDCRVASVFAFGSHRIVVGEVLGLNVTPAAPLVYSDRAYRRLQ 161
BLAST of mRNA_P-wetherbeei_contig13908.1.1 vs. uniprot
Match: UPI001C59B472 (flavin reductase family protein n=1 Tax=Pseudomonas sp. UMAB-08 TaxID=1365375 RepID=UPI001C59B472) HSP 1 Score: 146 bits (368), Expect = 1.790e-41 Identity = 72/154 (46.75%), Postives = 102/154 (66.23%), Query Frame = 1
Query: 40 QFTTAMRRAATPVSVVTTEGPGGRFGVTVSSICTASAEPPQVLVCVHLGGPTPVALRANKCFAVNILDSRHRHVADSFAGRIERWRQDRFACDAWNTIATGAPVLSDGLLVLDCELTQELVVSTHAVFVGLVVGLQSREGAPLLYSDQAYRTLE 501
+F AM + AT V+V+TT+G GGRFGVTVS++ + SAEPP +LVCV+ A+ N CF VN++++ + VA FAG+I+ DRFAC W TGAP+L + L DC + Q++ + TH VF+G VV ++SREGAPL YS + + L+
Sbjct: 26 EFIAAMGKCATGVTVITTDGAGGRFGVTVSAMTSVSAEPPLLLVCVNRNNLASKAIDQNGCFCVNVIETEQQPVAQVFAGQIKLENGDRFACADWTQHTTGAPLLDNALASFDCHIEQQMDLGTHTVFIGKVVAVKSREGAPLAYSHRKFCGLQ 179
BLAST of mRNA_P-wetherbeei_contig13908.1.1 vs. uniprot
Match: UPI001BCCE15C (flavin reductase family protein n=4 Tax=Ancylobacter TaxID=99 RepID=UPI001BCCE15C) HSP 1 Score: 142 bits (358), Expect = 3.970e-40 Identity = 77/158 (48.73%), Postives = 95/158 (60.13%), Query Frame = 1
Query: 28 VDIKQFTTAMRRAATPVSVVTTEGPGGRFGVTVSSICTASAEPPQVLVCVHLGGPTPVALRANKCFAVNILDSRHRHVADSFAGRIERWRQDRFACDAWNTIATGAPVLSDGLLVLDCELTQELVVSTHAVFVGLVVGLQSREGAPLLYSDQAYRTLE 501
+D F AM R A+ V+VVTT+G GR GVTVSS+C+ S EPP VL C+H G L +N FA NIL VADSFAG I R+DRFA W+ + TGAPVL D L DC++ TH + G VV L+S E PL+YS++AY LE
Sbjct: 12 IDAALFRQAMGRTASGVTVVTTDGDAGRGGVTVSSLCSLSMEPPSVLFCLHKGSRILSTLMSNGVFAANILAHDQHRVADSFAGLIPELREDRFAVADWDALHTGAPVLRDALCRFDCKIASVFEFGTHHIIAGEVVALESFETKPLVYSNRAYHKLE 169
BLAST of mRNA_P-wetherbeei_contig13908.1.1 vs. uniprot
Match: A0A853G4Z9_9BURK (Flavin reductase family protein n=2 Tax=Parapusillimonas granuli TaxID=380911 RepID=A0A853G4Z9_9BURK) HSP 1 Score: 142 bits (358), Expect = 7.570e-40 Identity = 71/150 (47.33%), Postives = 93/150 (62.00%), Query Frame = 1
Query: 43 FTTAMRRAATPVSVVTTEGPGGRFGVTVSSICTASAEPPQVLVCVHLGGPTPVALRANKCFAVNILDSRHRHVADSFAGRIERWRQDRFACDAWNTIATGAPVLSDGLLVLDCELTQELVVSTHAVFVGLVVGLQSREGAPLLYSDQAYR 492
F AMR AA V+V+TT+GP GR GVTVS+ C+ SA+PP VL CVH P +R N+ VN+L + HVADSFAGRI +WR +RFAC W+ + GAP L L +C L E+ +H + +G V + S LLY+D+AYR
Sbjct: 30 FLHAMRHAAASVTVLTTDGPAGRGGVTVSAFCSLSADPPSVLACVHQASPVLKLIRENRRVCVNLLATDQTHVADSFAGRIAQWRSNRFACAEWDEVENGAPQLRGALASFNCTLAGEMPFGSHYILIGRVEQVASSARGGLLYADRAYR 179
BLAST of mRNA_P-wetherbeei_contig13908.1.1 vs. uniprot
Match: A0A858X629_9HYPH (Flavin reductase n=1 Tax=Starkeya sp. ORNL1 TaxID=2709380 RepID=A0A858X629_9HYPH) HSP 1 Score: 141 bits (355), Expect = 8.890e-40 Identity = 73/160 (45.62%), Postives = 94/160 (58.75%), Query Frame = 1
Query: 19 MDPVDIKQFTTAMRRAATPVSVVTTEGPGGRFGVTVSSICTASAEPPQVLVCVHLGGPTPVALRANKCFAVNILDSRHRHVADSFAGRIERWRQDRFACDAWNTIATGAPVLSDGLLVLDCELTQELVVSTHAVFVGLVVGLQSREGAPLLYSDQAYRTL 498
M+ +D F AM R A V+VVTT+G GRFGVTVS++C+ S EPP VL C+H L AN FA NIL + VADSFAG I WR+DRF W+ TGAP+L L DC + +H + G V+ +++ G PL+YSD+AYR L
Sbjct: 1 MNALDPTHFRAAMGRTAAGVTVVTTDGEAGRFGVTVSTLCSLSLEPPSVLFCIHRESRALPYLIANDVFAANILAADQHRVADSFAGLIPEWREDRFQAGTWDRRITGAPLLHGALCRFDCRIASVFDFGSHRIVAGEVLDVETGSGEPLIYSDRAYRRL 160
BLAST of mRNA_P-wetherbeei_contig13908.1.1 vs. uniprot
Match: UPI001BCAB653 (flavin reductase family protein n=1 Tax=Ancylobacter sp. VKM B-3255 TaxID=2836179 RepID=UPI001BCAB653) HSP 1 Score: 137 bits (346), Expect = 2.050e-38 Identity = 73/161 (45.34%), Postives = 94/161 (58.39%), Query Frame = 1
Query: 19 MDPVDIKQFTTAMRRAATPVSVVTTEGPGGRFGVTVSSICTASAEPPQVLVCVHLGGPTPVALRANKCFAVNILDSRHRHVADSFAGRIERWRQDRFACDAWNTIATGAPVLSDGLLVLDCELTQELVVSTHAVFVGLVVGLQSREGAPLLYSDQAYRTLE 501
M +D F TAM R A+ V+VVTT+G GR GVTVSS+C+ S EPP VL C+H L N FA NIL VADSFAG I +R+DRFA W+ + TGAP+L L DC + TH + G V+ L++ E PL+YS++AY L+
Sbjct: 1 MSQIDAGHFRTAMGRTASGVTVVTTDGAAGRGGVTVSSLCSLSMEPPSVLFCLHKDSRVLPTLLENGVFAANILAHDQHRVADSFAGLIAEYREDRFAIADWDALTTGAPLLKGALCRFDCRIASVFGFGTHHIIAGEVMALETAETRPLVYSNRAYHHLK 161
BLAST of mRNA_P-wetherbeei_contig13908.1.1 vs. uniprot
Match: A0A1Y0KM04_9PSED (Flavin_Reduct domain-containing protein n=1 Tax=Pseudomonas sp. M30-35 TaxID=1981174 RepID=A0A1Y0KM04_9PSED) HSP 1 Score: 137 bits (346), Expect = 3.180e-38 Identity = 75/164 (45.73%), Postives = 101/164 (61.59%), Query Frame = 1
Query: 7 EAARMDPVDIKQFTTAMRRAATPVSVVTTEGPGGRFGVTVSSICTASAEPPQVLVCVHLGGPTPVALRANKCFAVNILDSRHRHVADSFAGRIERWRQDRFACDAWNTIATGAPVLSDGLLVLDCELTQELVVSTHAVFVGLVVGLQSREGAPLLYSDQAYRTL 498
EAA +D F AM + + V+VVTT+GPGGRFG+TVS++ + SAEPP +LVC++ A+ N CFAVN+L + +A FAG++ DRFAC +W TGAPVL L DC L Q++ + +HAVFVG V QS EG+ L YS + + TL
Sbjct: 14 EAAAVD------FIAAMGKCVSGVTVVTTDGPGGRFGLTVSAMSSVSAEPPLLLVCINRNNLACSAIDRNGCFAVNVLTGAQQQIAQVFAGQLPVAGGDRFACASWMEQHTGAPVLGQALASFDCYLEQQINLGSHAVFVGRVAQAQSAEGSALAYSQRIFGTL 171 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13908.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13908.1.1 >prot_P-wetherbeei_contig13908.1.1 ID=prot_P-wetherbeei_contig13908.1.1|Name=mRNA_P-wetherbeei_contig13908.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=161bp MDPVDIKQFTTAMRRAATPVSVVTTEGPGGRFGVTVSSICTASAEPPQVLback to top mRNA from alignment at P-wetherbeei_contig13908:135..635+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13908.1.1 ID=mRNA_P-wetherbeei_contig13908.1.1|Name=mRNA_P-wetherbeei_contig13908.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig13908:135..635+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13908:135..635+ >mRNA_P-wetherbeei_contig13908.1.1 ID=mRNA_P-wetherbeei_contig13908.1.1|Name=mRNA_P-wetherbeei_contig13908.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig13908:135..635+ (Phaeothamnion wetherbeei SAG_119_79)back to top |