mRNA_P-wetherbeei_contig1390.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1390.3.1 vs. uniprot
Match: A0A6U5EEF9_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EEF9_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.410e-14 Identity = 92/323 (28.48%), Postives = 136/323 (42.11%), Query Frame = 2
Query: 710 PNPLRNHVVTRLHHDWSGRMIYLVGTNHFLVDSAQLVLDVIRAVRPDVVVAELDQSRF------DAIVRRLSRVMADATAEESADR-----------TAAGARIKLWPWCSHL--LSRLPMRRPKEAQGLKAAAPKPGVVLEPEKMPGPEDYDEFYNCHGITEGLEFMAAYRGACELRSKYVFGDRDQDAMHRRMADALRADLFESPTADADADALISKSHAERERRAGLQPRYDVPNDLKELREYLVRRTTRAAARAENDIRRRYLPNFYNVLIGERDDFLVRAAV------ESRGLVT-VAVAGLAHLQGVEERLAAKGWR 1600
P L + ++ L D G I LVGT H +SA LV D+IR VRP+ V ELD R D ++ R +A E ++ R AG + P L S + K+ L AA V + M Y + G + G EF A E+ SK V GDRD R+++AL + T D+++ K + +G + D+ ++ L+ TR R+ + ++ LP Y L+ ERD+++ SRG+ VAV G+AHL GVE L +KGW+
Sbjct: 87 PPRLCDQAISELTLD--GVTIRLVGTAHISDESALLVGDIIRTVRPETVFVELDAKRVGRFLEKDGSGKQGDRTLAPTPVEPTSSRGWGVVRDPVSAPQAGTSVAPAPSTEKLGIFSAIRTGLGKKIASLYRAAEAAAVGSALQSM-----YSQLDKI-GFSSGEEFKMAIETGSEIGSKIVLGDRDVQVTLNRLSEALEIVDWNKLTTMTIDDSIMPKGMGQNSAASGDISKEDLSQVVEALK-------TRENVRSIMNSLKKELPELYTALVAERDEYMANGLDIIGKNGASRGMKNAVAVMGMAHLDGVERYLQSKGWK 394
BLAST of mRNA_P-wetherbeei_contig1390.3.1 vs. uniprot
Match: A0A6H5K4M4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4M4_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 1.830e-13 Identity = 98/366 (26.78%), Postives = 151/366 (41.26%), Query Frame = 2
Query: 536 LIFETESAMQPRKSFILAYALLPVASGAKTAEASHLTFVGA---AAALGTASFSTWKRTIEPNPLRNHVVTRLHHDWSGRMIYLVGTNHFLVDSAQLVLDVIRAVRPDVVVAELDQSRFDAIVR---RLSRVMADATAEESADRTAAGARIKLWPWCSHLLS-RLPMRRPKEAQGLKAAAPKPGVVLEPEKMPGPEDYDEFYNCHGITEGLEFMAAYRGACELRSKYVFGDRDQDAMHRRMADALRADLFESPTADADADALISKSHAERERRAGLQPRYDVPNDLKELREYLVRRTTRAAARAENDIRRRYLPNFYNVLIGERDDFLVRAAVESRGL----VTVAVAGLAHLQGVEERLAAKGWR 1600
L+ E E+ R+ ALL GA + AS + AAA GTA P L + V+ L++ ++LVGT H SA LV +VIR ++P VV+ ELD R + ++ + + +AD T +E A + LL ++P+ AAA + E M + G++ G EF A A +K + GDRD RR+++ALR + + + + + + D+ + + +R+ + + P YN +IGERD + AV GL VTVAV GLAH+ G+E L A GW+
Sbjct: 62 LLMELENTQLDRR------ALLRTIGGALASLASASALTASPQQAAAAGTAVGRRPGAKRSPTFLCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMKPSKQGEKTLADGTGKEIAPPAERTRNPFFGAFFKQLLDPKVPVND--RITDFFAAALGKAISKMYESM----------DQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRKIDLQKISQSGQMETGLGLEALDGSSVESINSSLDILKNRETMRKVI-------------GFYKEEAPELYNAMIGERDKVM---AVNLMGLDGKQVTVAVVGLAHVDGIEGILMANGWK 393
BLAST of mRNA_P-wetherbeei_contig1390.3.1 vs. uniprot
Match: C1MLW3_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MLW3_MICPC) HSP 1 Score: 78.6 bits (192), Expect = 1.610e-12 Identity = 78/287 (27.18%), Postives = 117/287 (40.77%), Query Frame = 2
Query: 758 SGRMIYLVGTNHFLVDSAQLVLDVIRAVRPDVVVAELDQSRFDAIVRRLSRVMADATAEESADRTAAGARIKLWPWCSHLLSRLPMRRPKEAQGLKAAAPKPGVVLEPEKMPGPEDYDEFYNCHGITEGLEFMAAYRGACELRSKYVFGDRDQDAMHRRMADALRADLFESPTADADADALISKSHAERERRAGLQPRYDVPNDLKELREYL----------VRRTTRAAARAENDIRRRYLPNFYNVLIGERDDFLVRAAVESRGLVTVAVAGLAHLQGVEERLAA 1588
+G +YL+GT H SA+ V DVI+AVRPD V EL + R +I R + + ++ A G K+ + L G VL G + + + +G+ GLEF A A ++ +K V GDRDQ+ RR+ +AL F A+ S G P +P DL E + + +T RA A +R + P ++ ERD+ + + TVAV G+AH+ G+E R A
Sbjct: 9 TGNEVYLIGTAHVSKKSAEEVRDVIQAVRPDTVFVELCEKRAASIRRSMLQ-------DDGASAPGGGVEDKVKEFLRVL----------------------GCVLGA----GLKSIYQAFRTYGLDPGLEFKVAIEEAEKIGAKLVMGDRDQEVTIRRLREALTMSDF--------LRAMFS---------GGTIPTDHMPPDLAERFSKIDWNDPQAAVEMMKTRRAVAEVTRHLRTDF-PKVAVAMVDERDEMMTNGLLHKCPGRTVAVVGMAHMDGIEARWRA 244
BLAST of mRNA_P-wetherbeei_contig1390.3.1 vs. uniprot
Match: A0A8J9RGE5_9CHLO (Probable TraB domain-containing protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RGE5_9CHLO) HSP 1 Score: 77.8 bits (190), Expect = 9.300e-12 Identity = 89/339 (26.25%), Postives = 141/339 (41.59%), Query Frame = 2
Query: 590 YALLPVASGAKTAEASHLTFVGAAAALGTASFSTWKRTIEPNPLRNHVVTRLHHDWSGRMIYLVGTNHFLVDSAQLVLDVIRAVRPDVVVAELDQSRFDAIVRRLSRVMADATAEESADRTAAGARIKLWPWCSHLLSRLPMRRPKEAQGLKAAAPKPGVVLEPEKMPGPEDYDEFYNCHGITEGLEFMAAYRGACELRSKYVFGDRDQDAMHRRMADALRADLFESPTADADADALISKSHAERERRAGLQPRYDVPNDLK-----ELREYLVRRTTRAAARAENDIRRRYLPNFYNVLIGERDDFLVRAAVESRGLVTVAVAGLAHLQGVEERLAAK 1591
Y L + A +A + L VG + + T + + + T L + +G I+LVGT H +SA+ V ++IR V+P VV+ EL ++R A R A ++++ + L+ + + + L K G+ + + G+ GLEF A A LR++ VFGD DQD RR++++L L+S GL P DV + LK +L + + R ARA + R+ P L ERD+++V+ + G V V V GLAHL G+E R A+
Sbjct: 48 YGLKCLQGAAASAPKTSLAQVGEVQQIWCPAIKQAYSTSASSAVLSETTTLLRNLTNGAEIFLVGTAHVSRNSAEEVRELIRVVKPTVVMVELCENR--------------------ARRLRASSQLQEGDFAKDLVQEVLRQLGAGGRDLPQQFIKMGM----------QGFYRLLKTWGMDPGLEFKVAMEEAELLRARIVFGDADQDRTMRRISESLSL------------QGLLSMVMG-----GGLPPA-DVLDFLKSNGSSKLTDQVEAMKNRKMARAMTEYMRKVNPALAEALTDERDEYMVKCLQKLEGRV-VGVVGLAHLDGIERRWDAE 337
BLAST of mRNA_P-wetherbeei_contig1390.3.1 vs. uniprot
Match: A0A7S0CDZ2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDZ2_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 3.320e-11 Identity = 76/289 (26.30%), Postives = 111/289 (38.41%), Query Frame = 2
Query: 758 SGRMIYLVGTNHFLVDSAQLVLDVIRAVRPDVVVAELDQSRFDAIVRRLSRVMADATAEESADRTAAGARIKLWPWCSHLLSRLPMRRPKEAQGLKAAAPKPGVVLEPEKMPGPEDYDEFYNCHGITEGLEFMAAYRGACELRSKYVFGDRDQDAMHRRMADALRADLFESPTADADADALISKSHAERERRAGLQPRYDVPNDLK-------ELREYLVRRTTRAAARAENDIRRRYLPNFYNVLIGERDDFLVRAAVE--SRGLVTVAVAGLAHLQGVEERLAAKGW 1597
+GR ++L+GT H SAQL V+R PD V ELD R D + S + TA + K P+ G K L + + + + G+ G EF A +L + V GDRD D +R+ A+ F+ L+S E+ P + K E+R + T +A +R P Y ++ ERD+++ R E ++ L TVAV GLAH+ GVE L A GW
Sbjct: 134 NGRTVHLLGTAHISSVSAQLAGRVVRETSPDAVFVELDAKRVDRVFLPESEANQQLVSNAP---TAVQSNTKKSPF-----------------GFIETIKKAPAALVGKTI---SNMYKKLESDGLNAGEEFSVAVNEGLKLNAAIVLGDRDVDVTLQRLTTAISKTNFKQ---------LLSADSQIEEQMINTLPTETIDTFQKIGSLSSDEMRTMVEILKTNDNVKALMANLKRAAPEIYGAMVAERDEYMARGLNELPNKYLTTVAVMGLAHIDGVERNLMASGW 390
BLAST of mRNA_P-wetherbeei_contig1390.3.1 vs. uniprot
Match: A0A6V2GKS8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2GKS8_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 6.000e-11 Identity = 81/327 (24.77%), Postives = 134/327 (40.98%), Query Frame = 2
Query: 680 SFSTWKRTIEPNPLRNHVVTRLHHDWSGRMIYLVGTNHFLVDSAQLVLDVIRAVRPDVVVAELDQSRFDA-----IVRRLSRVMADATAEESADRTAAGARIKLWPWCSHLLSRLPMRRPK-EAQGLKAAAPKPGVVLEPEKMPGPEDYDEFYN---CHGITEGLEFMAAYRGACELRSKYVFGDRDQDAMHRRMADAL-RADLFESPTADADADA----LISKSHAERERRAGLQPRYDVPNDLKELREYLVRRTTRAAARAENDIR------RRYLPNFYNVLIGERDDFLVRAAVESRGLV-TVAVAGLAHLQGVEERLAAKGW 1597
S S W +T+ PN + R+IYL+GT H SA L +++R+++PD V ELD R + S ++ +T + R A P EAQ ++ G +L+ + Y G G EF+ A + + S+ V GDRD D RR+ +AL + DL + ++D+D + L+ S + + P D + L Y+ +A++++R + P Y ++ ERD+++ + + TVAV G+AH+ GVE L GW
Sbjct: 142 SVSIWTKTL-PNTQQE------------RIIYLLGTAHISTSSADLAGELVRSIKPDAVFVELDAKRVGGGGNVRVEPVPSNSLSSSTDDTPMPRRLAPXXXXXXXXXXXXXXXXXXXXPAAEAQSKRSPFDIKGKILDAGSRMVGDSIKGLYKKLGAEGFNPGEEFVVAVKEGLAVGSQIVLGDRDVDVTLRRLTEALSKTDLKKLTSSDSDLEKSMQELLPSSSSGSSTGKPVDP---TAVDKESLARYVE------VVKAKDNVRLIMKTLQDAAPELYQAMVAERDEYMAKGLNKIDMFPSTVAVMGIAHVDGVERYLGGNGW 446
BLAST of mRNA_P-wetherbeei_contig1390.3.1 vs. uniprot
Match: C1FH60_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1FH60_MICCC) HSP 1 Score: 69.7 bits (169), Expect = 1.640e-9 Identity = 74/276 (26.81%), Postives = 111/276 (40.22%), Query Frame = 2
Query: 758 SGRMIYLVGTNHFLVDSAQLVLDVIRAVRPDVVVAELDQSRFDAIVRRLSRVMADATAEESADRTAAGARIKLWPWCSHLLSRLPMRRPKEAQGLKAAAPKPGVVLEPEKMPGPEDYDEFYNCHGITEGLEFMAAYRGACELRSKYVFGDRDQDAMHRRMADALRA-DLFESPTADADADAL-ISKSHAERERRAGLQPRYDVPNDLKELREYLVRRTTRAAARAENDIRRRYLPNFYNVLIGERDDFLVRAAVESRGLVTVAVAGLAHLQGVEER 1579
+G +YLVGT H SA V +VIR+VRPD V EL +R A+ R +S + E P+R+ L +A PG + E G + + G+ G EF + + ++ V GDR Q+ R + DA+ D+ T + ER +R ++ P EL + TR A RA RR P + ++ +RDD + + TVAV G+AH+ G+E R
Sbjct: 9 NGDEVYLVGTAHISRKSADEVRNVIRSVRPDTVFLELCDARAAAMRRSMSGKSDEGGIPE------------------------PLRQ------LLSALGAPGDLGEKMLGAGLKTVYNMFRMSGMDPGKEFKVGIEESDRIGARLVLGDRSQELTIRALRDAITLPDILRMITGGGSMQWRDVDPQLVERFKRVD----WNDPESAVELLK------TREAVRALTGQMRREFPRVASAMLDQRDDHMTDGLLNKCSGRTVAVVGMAHMDGIESR 244
BLAST of mRNA_P-wetherbeei_contig1390.3.1 vs. uniprot
Match: A0A7S4LCG8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LCG8_9EUGL) HSP 1 Score: 71.2 bits (173), Expect = 1.950e-9 Identity = 75/284 (26.41%), Postives = 116/284 (40.85%), Query Frame = 2
Query: 758 SGRMIYLVGTNHFLVDSAQLVLDVIRAVRPDVVVAELDQSRFDAIVRRLSRVMADATAEESADRTAAGARIKLWPWCSHLLSRLPMRRPKEAQGLKAAAPKPGVVLEPEKMPGPEDYDEFYNCHGITEGLEFMAAYRGACELRSKYVFGDRDQDAMHRRMADALRAD----LFESPTADAD-----ADALISKSHAERERRAGLQPRYDVPNDLKELREYLVRRTTRAAARAENDIRRRYLPNFYNVLIGERDDFLVRAAVESRGLVTVAVAGLAHLQGVEERL 1582
+GR ++L+GT H SA+LV +V+R VRP+ V+ ELD R + S ++ A AR L+ RL + GL AA + N G G EF+ A + A L + V GD+ D +R+ AL +F P + + A AL S S AE L ++ ++RE + + ++ LP Y L+ ERD ++ + S G V V G+AH+ G+E++L
Sbjct: 158 NGREVFLIGTAHISNISAELVKNVVREVRPETVMLELDAGRIK-MAPDGSGPQEGVVGSRASLSLAERARRDLFTGSKPFGVRLQKLQADLIGGLLAA------------------FYSALNQMGFDSGQEFIVALQEAKALNANIVLGDQPIDITLQRLQQALAVSDLSKMFSPPDSMNEVEIEVAQALNSGSKAE------LAGAVELLKQRSQVRELVA-------------VMKQQLPEVYQALLAERDSYMANSLRNSPGQRIVGVVGIAHMDGIEKKL 403
BLAST of mRNA_P-wetherbeei_contig1390.3.1 vs. uniprot
Match: A0A7S2Y0R5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0R5_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 2.830e-9 Identity = 81/309 (26.21%), Postives = 131/309 (42.39%), Query Frame = 2
Query: 713 NPLRNHVVTRLHHDWSGRMIYLVGTNHFLVDSAQLVLDVIRAVRPDVVVAELDQSRFDAIVRRLSRVMADATAE-ESADRTAAGARIKLWPWCSHLLSRLPMRRPKEAQGLKAAAPKPGVVLEPEKMPGPEDYDEFYNCHGITEGLEFMAAYRGACELRSKYVFGDRDQDAMHRRMADALR-ADLFESPTADADA--DALISKSHAERERRAG----LQPRYDVPNDLKELREYLVRRTTRAAARAENDIRRRYLPNFYNVLIGERDDFLVRAA--VESRGLVTVAVAGLAHLQGVEERLAAKGWRKES 1609
+P VT L SG +Y++GT H SA LV +VI+ V+P V+ ELD SR +L++ DA + ESAD AG++ + + P + + A G V+ + + G + G EF A A ++ + + GDR +R+A A+ +DL + + D + AL S ++A+ + A L+ R +V +K L + + P Y L+ ERD+++ + AV G+AH G+E+RL GW K S
Sbjct: 62 SPTCEQAVTHLKK--SGTDMYIIGTAHISSASALLVKEVIQQVKPGYVMLELDPSRV-----KLAKRNQDANTQFESAD---AGSKKGMNTGLFSEAFSVTQSTPISERLVSFTAGLVGTVIS--------TLYKSLDKRGFSSGEEFKVAIEEAGKINASVILGDRPAKETLKRLAQAISVSDLSQKSSGDMSSIEAALASLNYADNQALAETVEILKERENVKTMMKLLSDQV--------------------PELYKALVTERDEYMAAGLNKLSDAQKPVCAVVGIAHEDGIEQRLINNGWEKVS 332
BLAST of mRNA_P-wetherbeei_contig1390.3.1 vs. uniprot
Match: A0A7S0CEN7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CEN7_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 9.040e-8 Identity = 48/165 (29.09%), Postives = 70/165 (42.42%), Query Frame = 2
Query: 1130 GITEGLEFMAAYRGACELRSKYVFGDRDQDAMHRRMADALRADLFESPTADADADALISKSHAERERRAGLQPRYDVPNDLK-------ELREYLVRRTTRAAARAENDIRRRYLPNFYNVLIGERDDFLVRAAVE--SRGLVTVAVAGLAHLQGVEERLAAKGW 1597
G+ G EF A +L + V GDRD D +R+ A+ F+ L+S E+ P + K E+R + T +A +R P Y ++ ERD+++ R E ++ L TVAV GLAH+ GVE L A GW
Sbjct: 44 GLNAGEEFSVAVNEGLKLNAAIVLGDRDVDVTLQRLTTAISKTNFKQ---------LLSADSQIEEQMINTLPTETIDTFQKIGSLSSDEMRTMVEILKTNDNVKALMANLKRAAPEIYGAMVAERDEYMARGLNELPNKYLTTVAVMGLAHIDGVERNLMASGW 199 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1390.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1390.3.1 >prot_P-wetherbeei_contig1390.3.1 ID=prot_P-wetherbeei_contig1390.3.1|Name=mRNA_P-wetherbeei_contig1390.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=362bp MQPRKSFILAYALLPVASGAKTAEASHLTFVGAAAALGTASFSTWKRTIEback to top mRNA from alignment at P-wetherbeei_contig1390:2835..5325+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1390.3.1 ID=mRNA_P-wetherbeei_contig1390.3.1|Name=mRNA_P-wetherbeei_contig1390.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2491bp|location=Sequence derived from alignment at P-wetherbeei_contig1390:2835..5325+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1390:2835..5325+ >mRNA_P-wetherbeei_contig1390.3.1 ID=mRNA_P-wetherbeei_contig1390.3.1|Name=mRNA_P-wetherbeei_contig1390.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1086bp|location=Sequence derived from alignment at P-wetherbeei_contig1390:2835..5325+ (Phaeothamnion wetherbeei SAG_119_79)back to top |