mRNA_P-wetherbeei_contig13873.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13873.1.1 vs. uniprot
Match: A0A537P649_9PROT (Uncharacterized protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A537P649_9PROT) HSP 1 Score: 291 bits (744), Expect = 8.420e-97 Identity = 137/222 (61.71%), Postives = 176/222 (79.28%), Query Frame = 1
Query: 25 REMAVQLLATVMIPVSVAGTGLYYTRWQQNLNDLKTMIDLVSDQNPERRKYGVAMFEYLLKNDKVPVEFVAAQLSYANSSADKELLPLMEQALLKASAENTKVADTFRQALERMPSRIFVYAMNDKQRACMSVLMAKVKDTDRTNIVIPGFSRATWNGEGHELRVFRSSDVERANSLVKIFNDVGLPVILKDLSDVEGSAAKARANTFELWFGQAKLPASCG 690
R++ VQ+LATVMIP++VAGTGLYYTRWQQNLNDLKTMIDLVSD N E+RK+G+AM EYLLKNDKVPVEFVAAQL YANSS+DK++LPLME AL+KAS EN VA+TFR+ALER+PSR+FV+ + D+QRAC+S ++ +KD DR + +P ++ W+G+ HELRV + SD+ER + +F +GL + + +L+ + A K R NTFELWFG A LP CG
Sbjct: 2 RDIMVQVLATVMIPLTVAGTGLYYTRWQQNLNDLKTMIDLVSDDNSEKRKFGIAMLEYLLKNDKVPVEFVAAQLDYANSSSDKQMLPLMESALMKASDENPAVAETFRKALERLPSRLFVHVVTDQQRACISTMLLSLKDADRAQVSVPLIAQVNWDGKQHELRVLKDSDMERGQGIANMFASLGLELKVVNLTTIWDGAKKVRPNTFELWFGDAPLPTVCG 223
BLAST of mRNA_P-wetherbeei_contig13873.1.1 vs. uniprot
Match: A0A2S9QGF1_9HYPH (Uncharacterized protein n=3 Tax=Labrys TaxID=204476 RepID=A0A2S9QGF1_9HYPH) HSP 1 Score: 273 bits (697), Expect = 1.210e-89 Identity = 130/224 (58.04%), Postives = 167/224 (74.55%), Query Frame = 1
Query: 16 RPWREMAVQLLATVMIPVSVAGTGLYYTRWQQNLNDLKTMIDLVSDQNPERRKYGVAMFEYLLKNDKVPVEFVAAQLSYANSSADKELLPLMEQALLKASAENTKVADTFRQALERMPSRIFVYAMNDKQRACMSVLMAKVKDTDRTNIVIPGFSRATWNGEGHELRVFRSSDVERANSLVKIFNDVGLPVILKDLSDVEGSAAKARANTFELWFGQAKLPASC 687
RPWRE+ QLL+T +IP++VAG G YYTRWQQNL DL+TMIDL++D PE+RKYGVAMFEYLLKNDKVPVEF+ AQL YANSS+D++LLPL+E A+ KAS N V + +A R+PSRIFV+A+ND QR C +L+ ++KD D+ I P A W+GE HELR F++SD +RA++L ++F VGL + KDLS A +R NTFE+WFG LPA+C
Sbjct: 5 RPWREILPQLLSTALIPLTVAGIGWYYTRWQQNLADLRTMIDLMTDAAPEKRKYGVAMFEYLLKNDKVPVEFITAQLDYANSSSDRDLLPLLENAVQKASIVNNSVKSAYEEATARLPSRIFVHALNDAQRPCAGILLDEMKDGDKAAITFPSVILAKWSGEAHELRYFKTSDRKRADNLAELFAAVGLQLTTKDLSTSWSGARDSRPNTFEIWFGNPALPANC 228
BLAST of mRNA_P-wetherbeei_contig13873.1.1 vs. uniprot
Match: A0A2W2BQJ1_9HYPH (Uncharacterized protein n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2BQJ1_9HYPH) HSP 1 Score: 260 bits (665), Expect = 1.650e-84 Identity = 119/224 (53.12%), Postives = 164/224 (73.21%), Query Frame = 1
Query: 16 RPWREMAVQLLATVMIPVSVAGTGLYYTRWQQNLNDLKTMIDLVSDQNPERRKYGVAMFEYLLKNDKVPVEFVAAQLSYANSSADKELLPLMEQALLKASAENTKVADTFRQALERMPSRIFVYAMNDKQRACMSVLMAKVKDTDRTNIVIPGFSRATWNGEGHELRVFRSSDVERANSLVKIFNDVGLPVILKDLSDVEGSAAKARANTFELWFGQAKLPASC 687
R WR++ +Q+ AT+MIP+++AG GLYYTRWQQN+NDLKTMIDLVSD PER+KYG+AMFEYLLKNDKVPVEFVAAQL YAN+++D +LLP ME+AL A+ NT V F++A+ R+PSR+FV +N++QRAC S L+ +KDTD I +P + A W+G+ +E+R DV +A ++ ++G + + +L+++ A K R NTFE+WFG LP C
Sbjct: 15 RAWRDIMLQMTATIMIPLTIAGMGLYYTRWQQNVNDLKTMIDLVSDDKPERQKYGIAMFEYLLKNDKVPVEFVAAQLDYANNASDPQLLPAMERALTAAAQTNTNVQAVFKEAVGRLPSRVFVNVLNEQQRACFSKLLTGLKDTDGAAITVPSIAMAKWDGKVNEIRAMNDDDVPKAEAIANWLRNIGFDIQVVNLTNIWSGAKKVRPNTFEIWFGDKDLPPIC 238
BLAST of mRNA_P-wetherbeei_contig13873.1.1 vs. uniprot
Match: A0A6I0EGW9_HYPSQ (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EGW9_HYPSQ) HSP 1 Score: 201 bits (512), Expect = 1.500e-61 Identity = 97/223 (43.50%), Postives = 147/223 (65.92%), Query Frame = 1
Query: 22 WREMAVQLLATVMIPVSVAGTGLYYTRWQQNLNDLKTMIDLVSDQNPERRKYGVAMFEYLLKNDKVPVEFVAAQLSYANSSADKELLPLMEQALLKASAENTKVADTFRQALERMPSRIFVYAMNDKQRACMSVLMAKVKDTDRTNIVIPGFSRAT-WNGEGHELRVFRSSDVERANSLVKIFNDVGLPVILKDLSDVEGSAAKARANTFELWFGQAKLPASC 687
W + ++L+ V++P++VAG G Y+TRWQQN+NDLK+MIDLV+D++PE++KYG+AMFEYL KN KVPVEF++AQ+ YA ++ + ELLP++E A+ A+ EN+ VA+ +R ALER P+R+F++ ND C+ L KD D+ + P + + ELR F + D +RA + +F +GL + +KD+S + A N++ELWF LP C
Sbjct: 9 WWDAFFKMLSIVLVPLTVAGMGWYWTRWQQNVNDLKSMIDLVTDKSPEKQKYGIAMFEYLAKNGKVPVEFLSAQIDYATTAENHELLPMLEVAIQAAAKENSDVAEAYRVALERRPARVFIHVPNDDVYGCLVRLREAFKDADKAAVRFPAVRKYQGYANSNQELRFFHAEDEQRAKQIATLFRTLGLELSVKDISRTSWARTNA-PNSYELWFNGNPLPRIC 230
BLAST of mRNA_P-wetherbeei_contig13873.1.1 vs. uniprot
Match: A0A7Y4Z768_9BACT (Uncharacterized protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7Y4Z768_9BACT) HSP 1 Score: 53.1 bits (126), Expect = 7.640e-5 Identity = 33/130 (25.38%), Postives = 60/130 (46.15%), Query Frame = 1
Query: 28 EMAVQLLATVMIPVSVAGTGLYYTRWQQNLNDLK-------TMIDLVSDQNPERRKYGVAMFEYLLKNDKVPVEFV----------------AAQLSYANSSADKELLPLMEQALLKASAENTKVADTFR 348
E+ + +A +++P+S+A G ++TR ++ ++ K T +D +S N +++KY + YL N K+P E + AA L DKE L L+++ LL + + FR
Sbjct: 8 ELLINAMAGILVPISIAFVGYWFTRQKEKSDEQKNAIDTFSTYLDALSSDNQQKQKYALIALHYLKLNKKIPKELMDIVDVFASNTNLEVASAAMLVDMAKDIDKEDLSLLQELLLPVKIHLDRTKNAFR 137 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13873.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13873.1.1 >prot_P-wetherbeei_contig13873.1.1 ID=prot_P-wetherbeei_contig13873.1.1|Name=mRNA_P-wetherbeei_contig13873.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=232bp MTTTVRPWREMAVQLLATVMIPVSVAGTGLYYTRWQQNLNDLKTMIDLVSback to top mRNA from alignment at P-wetherbeei_contig13873:474..1169+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13873.1.1 ID=mRNA_P-wetherbeei_contig13873.1.1|Name=mRNA_P-wetherbeei_contig13873.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=696bp|location=Sequence derived from alignment at P-wetherbeei_contig13873:474..1169+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13873:474..1169+ >mRNA_P-wetherbeei_contig13873.1.1 ID=mRNA_P-wetherbeei_contig13873.1.1|Name=mRNA_P-wetherbeei_contig13873.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=696bp|location=Sequence derived from alignment at P-wetherbeei_contig13873:474..1169+ (Phaeothamnion wetherbeei SAG_119_79)back to top |