mRNA_P-wetherbeei_contig1387.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1387.3.1 vs. uniprot
Match: A0A836CAY5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY5_9STRA) HSP 1 Score: 127 bits (319), Expect = 2.770e-32 Identity = 81/198 (40.91%), Postives = 112/198 (56.57%), Query Frame = 1
Query: 133 ILVCTNTSCRKNGAQATLDMFQDLAPDDIEVEATGCHGECGNGPNVHVLPADAEYKNVFKPASAEAILSVDFGHDVPADVVSAYKEKMYGDQDLKRGAFDAALKRYEAALAFEALQGRGKALGSVMLSKSDALSKHGARRRDPTMLMAAVTAARAAVAALP---PGELRPRLRLADSLAAAGNVAAAIMELEEAAADL 717
+ VC + C+K G+ AT D+F+ APD +EVE +GCHG+CG+GPN+ + + Y V+KPA+A AIL + G VPA +++AYKEKM GDQDL+ G + +L + +AALA L +AL S LS+S+AL + A D P LRL D+L AAG VA A+ L+E A L
Sbjct: 8 VYVCVSKCCKKLGSPATHDLFRAFAPDGVEVEESGCHGQCGSGPNL--VASGTLYTGVYKPATAAAILEKECGAAVPAALITAYKEKMRGDQDLRDGRYAKSLTQIDAALASGHLDAFPEALCSAWLSRSEALHRQAAAATDXXXXXXXXXXXXXXXXXXXXXAPARRAAWLRLCDALDAAGAVAEALESLQEMEAAL 203
BLAST of mRNA_P-wetherbeei_contig1387.3.1 vs. uniprot
Match: A0A7S2C305_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C305_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.280e-13 Identity = 41/122 (33.61%), Postives = 64/122 (52.46%), Query Frame = 1
Query: 100 AIAPGTAIVRKILVCTNTSCRKNGAQATLDMFQDLAPDD-IEVEATGCHGECGNGPNVHVLPADAEYKNVFKPASAEAILSVDFGHDVPADVVSAYKEKMYGDQDLKRGAFDAALKRYEAAL 462
A+ G + + CT+ CR G+ T MF DL + ++ TGC C GPN+ A Y ++ K ++A A+LS++FG D+P VV AY E G++ L+ D A+ ++ AL
Sbjct: 23 ALVNGPKKLHSVFTCTSKDCRSRGSLDTKQMFDDLTSNTAVDSRTTGCSSRCNCGPNIETS-AGKRYSDLTKASTAAAVLSIEFGLDIPDSVVDAYTEFQEGNRFLQSENLDDAIAAFKRAL 143
BLAST of mRNA_P-wetherbeei_contig1387.3.1 vs. uniprot
Match: A0A2V0NLM2_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NLM2_9CHLO) HSP 1 Score: 78.6 bits (192), Expect = 1.420e-13 Identity = 62/201 (30.85%), Postives = 94/201 (46.77%), Query Frame = 1
Query: 130 KILVCTNTSCRKNGAQATLDMFQDLAPDDIEVEATGCHGECGNGPNVHVLPADAEYKNVFKPASAEAILSVDFGHDVPADVVSAYKEKMYGDQDLKRGAFDAALKRYEAALAFEALQGRGKAL-------GSVMLSKSDALSKHGARRRDPTMLMAAVTAARAAVAALPPGELRPRLRLADSLAAAGNVAAAIMELEEAAA 711
++ +CT C+K G++ + + L ++EV A GC G CGNGPN+ +LP ++V PA L G DV +++ A + ++ G+ G A++RY AAL+ A G G L + L + DA +H ARAAVA+ P G + +RL D+L A G A +E A A
Sbjct: 72 EVRICTGKVCKKQGSEQIVRFGEQLGLPNLEVRACGCLGNCGNGPNLVLLPQAQVLRHVATPADLAEALRAFCGADVGDELLRATELRLAGNALAMAGDLRGAVERYRAALS-AAPNGAGAHLIHANLSATHLQLGEKDAALEH----------------ARAAVASAPRGFHKAHVRLVDALYALGRYGEAEAAVEAAVA 255
BLAST of mRNA_P-wetherbeei_contig1387.3.1 vs. uniprot
Match: A0A835T5X7_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T5X7_9CHLO) HSP 1 Score: 73.2 bits (178), Expect = 4.250e-12 Identity = 53/178 (29.78%), Postives = 85/178 (47.75%), Query Frame = 1
Query: 139 VCTNTSCRKNGAQATLDMFQDLAPDDIEVEATGCHGECGNGPNVHVLPADAEYKNVFKPASAEAILSVDFGHDVPADVVSAYKEKMYGDQDLKRGAFDAALKRYEAALAFEALQGRGKALGSVMLSKSDALSKHGARRRDPTMLMAAVTAARAAVAALPPGELRPRLRLADSLAAAGN 672
+C + +C++ GA L DL +++ TGC G CGNGPN +LPA+ +V PA +L G + V+ A + ++ G+ +G F A++ Y+ AL + G + + + S AL + G + AA+ +AR AV + P G +RL D L A G
Sbjct: 1 MCVHRTCKRQGADNILKFVNDLGLPEVKATPTGCLGNCGNGPNAVLLPAEQLLHHVATPADVTQVLKGLAGASIDESVLQATQLRLAGNACAGQGDFKQAIELYQRALELKPSSG----VHMLHSNLSAALLQAGDKE-------AALQSARKAVESSPRGFHNSTIRLIDCLYALGR 167
BLAST of mRNA_P-wetherbeei_contig1387.3.1 vs. uniprot
Match: A0A2T1FVG4_9CYAN (Ferredoxin n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A2T1FVG4_9CYAN) HSP 1 Score: 70.1 bits (170), Expect = 5.710e-12 Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 1
Query: 127 RKILVCTNTSCRKNGAQATLDMFQDLAPDDIEVEATGCHGECGNGPNVHVLPADAEYKNVFKPASAEAILSVDFGH 354
R++LVC N +CRK GA L FQ L+P ++EV A+ C G+CGNGP V VLP + Y V AE ++++ H
Sbjct: 8 RQVLVCQNRTCRKQGAAKVLAAFQKLSPSEVEVVASSCLGQCGNGPMVLVLPEEVWYSGVC----AEEVVAITEQH 79
BLAST of mRNA_P-wetherbeei_contig1387.3.1 vs. uniprot
Match: A0A7S3VKW7_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VKW7_DUNTE) HSP 1 Score: 73.2 bits (178), Expect = 9.770e-12 Identity = 57/191 (29.84%), Postives = 85/191 (44.50%), Query Frame = 1
Query: 106 APGTAIVRKIL-VCTNTSCRKNGAQATLDMFQDLAPD-DIEVEATGCHGECGNGPNVHVLPADAEYKNVFKPASAEAILSVDFGHDVPADVVSAYKEKMYGDQDLKRGAFDAALKRYEAALAFEALQGRGKALGSVMLSKSDALSKHGARRRDPTMLMAAVTAARAAVAALPPGELRPRLRLADSLAAAGN 672
AP + + +K L VC + +CRK GAQ QDL + D+ V C G CGNGPN+ ++P E +V A +L+ G +P VV + K G+ G D A + Y A +A G L ++ +++ + G A+ A+ AV PP + +RL D L A G
Sbjct: 43 APPSPVRKKELRVCLSRTCRKQGAQEVFKFLQDLTQEADVRVRDCSCLGNCGNGPNMALMPEGKELDHVATLDDATRVLTQICGVSIPEPVVKSLALKQQGNAAAIAGRLDEAAENYSAGIALNPSTG----LHLLLCNRASVYLQQG-------RCSEALADAQQAVQLAPPSFVNGWIRLVDCLYALGR 222
BLAST of mRNA_P-wetherbeei_contig1387.3.1 vs. uniprot
Match: A0A6P0HZV2_9CYAN ((2Fe-2S) ferredoxin domain-containing protein n=3 Tax=unclassified Okeania TaxID=2634635 RepID=A0A6P0HZV2_9CYAN) HSP 1 Score: 68.9 bits (167), Expect = 1.170e-11 Identity = 34/76 (44.74%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 121 IVRKILVCTNTSCRKNGAQATLDMFQDLAPDDIEVEATGCHGECGNGPNVHVLPADAEYKNVFKPASAEAILSVDF 348
+ R++LVC N +CRK G+ L F+ DI+VE +GC G+CGNGP V VLP + Y VF P IL F
Sbjct: 7 VERRLLVCQNRTCRKQGSAKVLAAFESSEVPDIKVEKSGCLGQCGNGPMVLVLPEEVWYSRVF-PQKISTILEKSF 81
BLAST of mRNA_P-wetherbeei_contig1387.3.1 vs. uniprot
Match: A8JBD3_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8JBD3_CHLRE) HSP 1 Score: 72.4 bits (176), Expect = 1.170e-11 Identity = 57/192 (29.69%), Postives = 93/192 (48.44%), Query Frame = 1
Query: 97 LAIAPGTAIVRKILVCTNTSCRKNGAQATLDMFQDLAPDDIEVEATGCHGECGNGPNVHVLPADAEYKNVFKPASAEAILSVDFGHDVPADVVSAYKEKMYGDQDLKRGAFDAALKRYEAALAFEALQGRGKALGSVMLSKSDALSKHGARRRDPTMLMAAVTAARAAVAALPPGELRPRLRLADSLAAAGN 672
LA+A T + ++ VC + SC++ G++ + DL +++ TGC G CGNGPN +LPA+ +V PA +L G V V+ A + ++ G+ +G F A++ Y+ AL + + G+ ML + + + A +D AA+ A+ AV P G +RL D L A G
Sbjct: 11 LAVAAVTKL--ELQVCIHRSCKRQGSENIIKFVNDLGISEVKATTTGCLGNCGNGPNAVLLPAEQLLHHVATPADVAQVLQSLGGASVDGRVLQATQLRLAGNACAGQGDFKQAIELYKRALELQ------PSSGTHMLYSNMSAALLQAGDKD-----AALDNAQKAVDTSPRGFHNSTIRLIDCLYALGR 189
BLAST of mRNA_P-wetherbeei_contig1387.3.1 vs. uniprot
Match: A0A2P6VML7_9CHLO (Tetratricopeptide repeat 1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VML7_9CHLO) HSP 1 Score: 72.4 bits (176), Expect = 1.190e-11 Identity = 64/201 (31.84%), Postives = 86/201 (42.79%), Query Frame = 1
Query: 91 ASLAIAPGTAIVRKILVCTNTSCRKNGAQATLDMFQDLAPDDIEVEATGCHGECGNGPNVHVLPADAE----YKNVFKPASAEAILSVDFGHDVPADVVSAYKEKMYGDQDLKRGAFDAALKRYEAALAFEALQGRGKALGS---VMLSKSDALSKHGARRRDPTMLMAAVTAARAAVAALPPGELRPRLRLADSLAAAGN 672
A+LA+A TA ++ VCT C+K G+ QDL IEV+ GC ECGNGPNV V+P D K+V P+ +L G V ++ A + ++ G+ RG A + Y LA E GR L + V L DA A+ A AA A PPG +R + L G
Sbjct: 3 AALAVAASTAF--QLRVCTGKVCKKQGSPQIAKFAQDLQLPQIEVQTCGCLSECGNGPNVAVIPLDGTRLLVLKHVGTPSRMADLLREVCGAPVDEVLLRATELRLAGNAAAVRGRLAQAAELYSRGLALEPPTGRHLLLSNRSGVRLELGDAEG--------------ALEDASAAAACCPPGFTTAAIRQVEGLLKLGQ 187
BLAST of mRNA_P-wetherbeei_contig1387.3.1 vs. uniprot
Match: K9TH82_9CYAN (Ferredoxin n=1 Tax=Oscillatoria acuminata PCC 6304 TaxID=56110 RepID=K9TH82_9CYAN) HSP 1 Score: 68.2 bits (165), Expect = 2.580e-11 Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 1
Query: 127 RKILVCTNTSCRKNGAQATLDMFQDLAPDDIEVEATGCHGECGNGPNVHVLPADAEYKNVFKPASAEAILSVDFGHDVP 363
+++L+CTN +CRK G+Q L FQ L D+ +E++ C G+CGNGP V +LP + Y V +P A++ +P
Sbjct: 4 KRVLICTNRTCRKQGSQKVLAAFQSLPIPDVTIESSSCLGQCGNGPMVLILPDEIWYSQV-QPDEVRAVVERHLQRGIP 81 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1387.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1387.3.1 >prot_P-wetherbeei_contig1387.3.1 ID=prot_P-wetherbeei_contig1387.3.1|Name=mRNA_P-wetherbeei_contig1387.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp ETECSVERRAPRRPRCQALFAVGFLLLSRCASLAIAPGTAIVRKILVCTNback to top mRNA from alignment at P-wetherbeei_contig1387:6355..7264+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1387.3.1 ID=mRNA_P-wetherbeei_contig1387.3.1|Name=mRNA_P-wetherbeei_contig1387.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=910bp|location=Sequence derived from alignment at P-wetherbeei_contig1387:6355..7264+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1387:6355..7264+ >mRNA_P-wetherbeei_contig1387.3.1 ID=mRNA_P-wetherbeei_contig1387.3.1|Name=mRNA_P-wetherbeei_contig1387.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig1387:6355..7264+ (Phaeothamnion wetherbeei SAG_119_79)back to top |