mRNA_P-wetherbeei_contig13854.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13854.1.1 vs. uniprot
Match: A0A836CLB2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB2_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.370e-60 Identity = 91/141 (64.54%), Postives = 111/141 (78.72%), Query Frame = 1
Query: 1 TDEDERKKRQSQLAERISNKLQAAFCTFAGFGLAYKTNFVPILMEDKRVNRFWFNIAVACFTINTMIMLYLTIWLPKVQRVQASWNVYCPRMIPAATVIGLICAVTLNLALWNVWGLLTPLILAGVFLGCFFSLHFVPWPC 423
T E+ERK+R+++LAERISNKL AAF T + Y T+FV +L++D RV R WFN+A ACF +N +IM YLT+WLP VQRV WN+YCPR IPAAT +G+IC V+LNLALW+VWG LTPLIL VF+GC F LHFVPWPC
Sbjct: 19 TSEEERKRRRTELAERISNKLHAAFWTIVAGVVVYYTDFVRVLLQDDRVKRPWFNLATACFAVNCVIMGYLTLWLPLVQRVSTPWNIYCPRAIPAATAVGVICGVSLNLALWSVWGFLTPLILLVVFMGCLFFLHFVPWPC 159
BLAST of mRNA_P-wetherbeei_contig13854.1.1 vs. uniprot
Match: D8LGK7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK7_ECTSI) HSP 1 Score: 191 bits (486), Expect = 4.890e-59 Identity = 86/141 (60.99%), Postives = 113/141 (80.14%), Query Frame = 1
Query: 1 TDEDERKKRQSQLAERISNKLQAAFCTFAGFGLAYKTNFVPILMEDKRVNRFWFNIAVACFTINTMIMLYLTIWLPKVQRVQASWNVYCPRMIPAATVIGLICAVTLNLALWNVWGLLTPLILAGVFLGCFFSLHFVPWPC 423
T+ ++ K+R+SQLA+RISNKL A F G + Y+T+FV +L+ED+RV+R WFNI + CF++N +I+ YLT+WLP V+ ++ SWNVY PR IP ATV+GLICA+ LN++LWNVWG LTPLIL VF+GC FSLHFVPWPC
Sbjct: 99 TEAEQSKRRRSQLADRISNKLHAFFWVVVGVAVVYRTDFVRVLVEDERVDRLWFNIGLVCFSVNAVILAYLTVWLPHVRGIRVSWNVYSPRAIPTATVVGLICALALNMSLWNVWGFLTPLILFAVFIGCLFSLHFVPWPC 239
BLAST of mRNA_P-wetherbeei_contig13854.1.1 vs. uniprot
Match: A0A8J2SGJ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGJ0_9STRA) HSP 1 Score: 150 bits (378), Expect = 9.920e-44 Identity = 71/135 (52.59%), Postives = 93/135 (68.89%), Query Frame = 1
Query: 19 KKRQSQLAERISNKLQAAFCTFAGFGLAYKTNFVPILMEDKRVNRFWFNIAVACFTINTMIMLYLTIWLPKVQRVQASWNVYCPRMIPAATVIGLICAVTLNLALWNVWGLLTPLILAGVFLGCFFSLHFVPWPC 423
KKR+S+LAE+++ K+QAA AG +AY+T+ +L+ NRFW ++A ACF N ++ YLT+WLP VQR+ WNVYCPR+IP TV+GL C +L LW VWGLLTPLIL V + C SLHF+P PC
Sbjct: 24 KKRRSELAEQVATKIQAAAWVAAGGFVAYQTDLPVVLLAGTETNRFWCDVAAACFAANCVLCFYLTVWLPHVQRIDLEWNVYCPRVIPTMTVLGLTCGFSLIRGLWPVWGLLTPLILGLVAMACLMSLHFIPIPC 158
BLAST of mRNA_P-wetherbeei_contig13854.1.1 vs. uniprot
Match: A0A7S3JQ39_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQ39_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.010e-40 Identity = 69/134 (51.49%), Postives = 89/134 (66.42%), Query Frame = 1
Query: 19 KKRQSQLAERISNKLQAAFCTFAGFGLAYKTNFVPILMEDKRVNRFWFNIAVACFTINTMIMLYLTIWLPKVQRVQASWNVYCPRMIPAATVIGLICAVTLNLALWNVWGLLTPLILAGVFLGCFFSLHFVPWP 420
+KR+++ AE I+ K+QA G + Y TN +L++D V+RFW NIA A F IN ++ YLT+WLP V R+ WN+YCPR+IP T +GLICA +L LW VWGLLTPLILA F+ C LHFVP P
Sbjct: 22 RKRRAEAAELIATKIQAVVWVVVGGFVVYHTNMPYVLLQDPSVHRFWLNIAAATFAINAVLCSYLTLWLPYVARIDIEWNIYCPRIIPTMTAVGLICAFSLIRGLWPVWGLLTPLILAITFMACIMLLHFVPAP 155
BLAST of mRNA_P-wetherbeei_contig13854.1.1 vs. uniprot
Match: W7TLQ7_9STRA (Transmembrane protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLQ7_9STRA) HSP 1 Score: 126 bits (317), Expect = 6.930e-34 Identity = 60/134 (44.78%), Postives = 89/134 (66.42%), Query Frame = 1
Query: 19 KKRQSQLAERISNKLQAAFCTFAGFGLAYKTNFVPILMEDKRVNRFWFNIAVACFTINTMIMLYLTIWLPKVQRVQASWNVYCPRMIPAATVIGLICAVTLNLALWNVWGLLTPLILAGVFLGCFFSLHFVPWP 420
K+ ++++ ERIS KLQA + TNFV ++++D+R+NR +F++A+ C IN I LYLT++L ++ + W YCPRMIPAAT G++CA+ L +LW V+G PLIL +F G FS+HF+PWP
Sbjct: 73 KRERAEIWERISVKLQAGAWVLGMMATLHYTNFVHVVLDDERLNRVYFHLAMICLGINLCIGLYLTVYLQLIKGINIEWATYCPRMIPAATFSGVVCAICLVSSLWPVYGFFAPLILLVIFFGSMFSMHFIPWP 206
BLAST of mRNA_P-wetherbeei_contig13854.1.1 vs. uniprot
Match: A0A7S2JTX7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JTX7_9STRA) HSP 1 Score: 123 bits (309), Expect = 3.580e-33 Identity = 61/131 (46.56%), Postives = 86/131 (65.65%), Query Frame = 1
Query: 25 RQSQLAERISNKLQAAFCTFAGFGLAYKTNFVPILMEDKRVNRFWFNIAVACFTINTMIMLYLTIWLPKVQRVQASWNVYCPRMIPAATVIGLICAVTLNLALWNVWGLLTPLILAGVFLGCFFSLHFVPW 417
R+ AERIS+K A + Y T+F + + D++++R F ++V C INT++ LYLT++LPK+ +V A W+VYCPR+IP T IG +CAV L A + VWG L+P+IL VFLG F LHF+PW
Sbjct: 35 RKKTRAERISDKFHALCWVIISGAVVYYTDFFNVFLHDEKIHRPTFLLSVVCLVINTILTLYLTVYLPKIAQVTAPWDVYCPRVIPTMTGIGCLCAVLLIRASYPVWGFLSPIILGIVFLGFLFGLHFIPW 165
BLAST of mRNA_P-wetherbeei_contig13854.1.1 vs. uniprot
Match: A0A485KKF8_9STRA (Aste57867_8441 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKF8_9STRA) HSP 1 Score: 123 bits (308), Expect = 6.920e-33 Identity = 58/125 (46.40%), Postives = 77/125 (61.60%), Query Frame = 1
Query: 40 AERISNKLQAAFCTFAGFGLAYKTNFVPILMEDKRVNRFWFNIAVACFTINTMIMLYLTIWLPKVQRVQASWNVYCPRMIPAATVIGLICAVTLNLALWNVWGLLTPLILAGVFLGCFFSLHFVP 414
AE IS KL A L Y + + D RV+R +FNI + CF IN I LYL +WLP ++++ W+VYCPRM+P AT +GL+CA+T + LW VWGL TP IL +FLG + HF+P
Sbjct: 51 AEWISTKLHALLWVLGAGSLVYTLDVFRVAFRDARVHRVYFNIGLVCFGINCCITLYLAVWLPYIKKIDLEWSVYCPRMVPTATAVGLLCALTFTIGLWPVWGLFTPGILFVLFLGSLMTAHFLP 175
BLAST of mRNA_P-wetherbeei_contig13854.1.1 vs. uniprot
Match: A0A6G0XCK9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCK9_9STRA) HSP 1 Score: 122 bits (307), Expect = 8.520e-33 Identity = 58/125 (46.40%), Postives = 78/125 (62.40%), Query Frame = 1
Query: 40 AERISNKLQAAFCTFAGFGLAYKTNFVPILMEDKRVNRFWFNIAVACFTINTMIMLYLTIWLPKVQRVQASWNVYCPRMIPAATVIGLICAVTLNLALWNVWGLLTPLILAGVFLGCFFSLHFVP 414
AE +S K+ A LAY + + D RV+R +FNI + CF IN I +YL +WLP V+++ W+VYCPRMIP ATV+GL+CA+ L + LW VWG TP IL +FLG + HF+P
Sbjct: 46 AEWVSTKIHAVLWIVGAASLAYFLDVFRVAFRDARVHRIYFNIGLVCFGINCCITMYLAVWLPYVKKIDLEWSVYCPRMIPTATVVGLLCALMLTIGLWPVWGFFTPGILFVLFLGALMTAHFLP 170
BLAST of mRNA_P-wetherbeei_contig13854.1.1 vs. uniprot
Match: A0A1W0A176_9STRA (Transmembrane protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A176_9STRA) HSP 1 Score: 122 bits (306), Expect = 9.900e-33 Identity = 59/125 (47.20%), Postives = 80/125 (64.00%), Query Frame = 1
Query: 40 AERISNKLQAAFCTFAGFGLAYKTNFVPILMEDKRVNRFWFNIAVACFTINTMIMLYLTIWLPKVQRVQASWNVYCPRMIPAATVIGLICAVTLNLALWNVWGLLTPLILAGVFLGCFFSLHFVP 414
AE +S KL AA + LAY + + + D RV+R +FNI + CF +N I LYL +WLP V+++ W+VYCPRMIP AT+IG++CA+ L LW VWG TP IL +FLG + HF+P
Sbjct: 39 AEYVSTKLHAALWIGSAVALAYCLDVLNVAFHDPRVHRLYFNIGLVCFGMNCCITLYLAVWLPYVKKIDLEWSVYCPRMIPTATIIGILCALGFILGLWPVWGFFTPGILFVLFLGSLMTAHFLP 163
BLAST of mRNA_P-wetherbeei_contig13854.1.1 vs. uniprot
Match: A0A024UNE8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNE8_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.960e-32 Identity = 60/126 (47.62%), Postives = 81/126 (64.29%), Query Frame = 1
Query: 40 AERISNKLQAAFCTFAGFG-LAYKTNFVPILMEDKRVNRFWFNIAVACFTINTMIMLYLTIWLPKVQRVQASWNVYCPRMIPAATVIGLICAVTLNLALWNVWGLLTPLILAGVFLGCFFSLHFVP 414
AE IS K+ A F G G L Y + + + D RV+R +FN+ + CF INT I LYL IWLP V+++ WNVYCPRM+P AT++G++CA+ + LW VWG TP IL +FLG + HF+P
Sbjct: 51 AEVISTKIHA-FLWIVGAGFLLYYLDVMHVAFRDSRVHRVYFNLGLVCFGINTCITLYLAIWLPYVKKIDLEWNVYCPRMVPTATIVGVVCALMFTMGLWPVWGFFTPGILFVLFLGALMTAHFLP 175 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13854.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13854.1.1 >prot_P-wetherbeei_contig13854.1.1 ID=prot_P-wetherbeei_contig13854.1.1|Name=mRNA_P-wetherbeei_contig13854.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=142bp TDEDERKKRQSQLAERISNKLQAAFCTFAGFGLAYKTNFVPILMEDKRVNback to top mRNA from alignment at P-wetherbeei_contig13854:57..1016- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13854.1.1 ID=mRNA_P-wetherbeei_contig13854.1.1|Name=mRNA_P-wetherbeei_contig13854.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=960bp|location=Sequence derived from alignment at P-wetherbeei_contig13854:57..1016- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13854:57..1016- >mRNA_P-wetherbeei_contig13854.1.1 ID=mRNA_P-wetherbeei_contig13854.1.1|Name=mRNA_P-wetherbeei_contig13854.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=426bp|location=Sequence derived from alignment at P-wetherbeei_contig13854:57..1016- (Phaeothamnion wetherbeei SAG_119_79)back to top |