mRNA_P-wetherbeei_contig138.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig138.4.1 vs. uniprot
Match: D8LR30_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR30_ECTSI) HSP 1 Score: 127 bits (319), Expect = 6.210e-33 Identity = 67/149 (44.97%), Postives = 88/149 (59.06%), Query Frame = 2
Query: 269 REDIAFLIIYCNGVDVNKPDSATGLSPLHHCAQLNLPTTAHKLVTWGADVNARDKVMMTPLMLAARLGHTIMVELLGGQLRADVDAQDRAGWTALHYAVSCDRGGAVEALLALDADATIADAKGKLPADWAQYLDFGELCDELERAQKR 715
REDIA LII + D+N PD+ TGLSPLH L+L ++A KL GA++NA DKV MTPLML RLGH +V++L A++D D+AGWT L YA + V LL AD D +G DW +++ FGE C R + +
Sbjct: 4 REDIADLIISIDDTDINAPDTITGLSPLHKTVLLDLGSSAQKLAFRGANINATDKVGMTPLMLGCRLGHEAIVDMLVDVFGAEIDPADKAGWTCLFYATYHNESNIVHYLLMHGADTDHKDKRGMTAIDWGEHMRFGETCAIFSRFESQ 152
BLAST of mRNA_P-wetherbeei_contig138.4.1 vs. uniprot
Match: A0A6V2QUB7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QUB7_HETAK) HSP 1 Score: 88.2 bits (217), Expect = 1.070e-16 Identity = 48/79 (60.76%), Postives = 54/79 (68.35%), Query Frame = 2
Query: 233 GRTALSLAVKAMREDIAFLIIYCNGVDVNKPDSATGLSPLHHCAQLNLPTTAHKLVTWGADVNARDKVMMTPLMLAARL 469
GRTALSLAVK RED+A LI+ DV+KPD ATGL+PLHHC QLNL T KL +V+ DK MTPLMLA L
Sbjct: 133 GRTALSLAVKEKREDLADLILGNRHCDVDKPDRATGLAPLHHCVQLNLLATIQKLSWRECEVDPADKKGMTPLMLACAL 211
BLAST of mRNA_P-wetherbeei_contig138.4.1 vs. uniprot
Match: UPI001601A2C9 (ankyrin-3-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001601A2C9) HSP 1 Score: 65.5 bits (158), Expect = 2.680e-8 Identity = 55/135 (40.74%), Postives = 67/135 (49.63%), Query Frame = 2
Query: 311 DVNKPDSATGLSPLHHCA-----QLNLPTTAHKLVTWGADVNARDKVMMTPLMLAARLGHTIMVELLGGQLRADVDAQDRA-GWTALHYAVSCDRGGAVEALLALDADATIADAKGKLPADWAQYLDFGELCDEL 697
DVN SA G +H A QL+L T + GADVNA + +TPL LAA LGH I VE+L L AD + D GWT LHYA S + V LL AD + G P D A+ D + C E+
Sbjct: 252 DVNNEKSAEGDLLIHIAAAGGVDQLDLLMTL--VCIQGADVNAYNGKGLTPLCLAADLGHAITVEVLICILGADPNKCDLVRGWTPLHYAASHNYMDIVSCLLKRGADVNLESYNGLRPDDVAKRYDAAD-CTEI 383
BLAST of mRNA_P-wetherbeei_contig138.4.1 vs. uniprot
Match: A0A1I8IYK5_9PLAT (Protein kinase domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8IYK5_9PLAT) HSP 1 Score: 62.0 bits (149), Expect = 4.090e-7 Identity = 45/114 (39.47%), Postives = 62/114 (54.39%), Query Frame = 2
Query: 239 TALSLAVKAMREDIAFLIIYCNGVDVNKPDSATGLSPLHHCAQLNLPTTAHKLVTWGADVNARDKVMMTPLMLAARLGH-TIMVELLGGQLRADVDAQDRAGWTALHYAVSCDR 577
T L A A D+ L++ G ++ DS +G S LH A+ N L+ A+V+ARD+V TPLML A LGH T+ +LL + AD D Q G+TA+H A C+R
Sbjct: 688 TPLMRAAWANLPDMIRLLLKA-GARLDDSDSESGASALHIAARENASAAVAALIDAQANVDARDRVRRTPLMLCAALGHRTVGEQLL--RAGADTDLQRDTGYTAMHLA--CER 796
BLAST of mRNA_P-wetherbeei_contig138.4.1 vs. uniprot
Match: A0A2T7PQ45_POMCA (RING-type E3 ubiquitin transferase n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PQ45_POMCA) HSP 1 Score: 61.6 bits (148), Expect = 4.870e-7 Identity = 49/144 (34.03%), Postives = 72/144 (50.00%), Query Frame = 2
Query: 236 RTALSLAVKAMREDIAFLIIYCNGVDVNKPDSATGLSPLHHCAQLNLPTTAHKLVTWGADVNARDKVMMTPLMLAARLG-HTIMVELLG-----GQLRADVDAQDRAGWTALHYAVSCDRGGAVEALLALDADATIADAKGKLP 649
+TAL A+++ R++IA L+I+ G ++ D+ S +H A ++ T LV GAD+NA+DK M TPL++A + G H M L G ++ A LH A + VEALL L AD D+ G P
Sbjct: 535 KTALGAAIESKRDEIACLLIH-RGAHLSYVDNNKS-SYVHLAAYYDMATVIGLLVAQGADINAKDKDMDTPLLIAVQRGSHRAMEAFLSMSGIDGGANVNLHASGMMYNCPLHIACHMAKLQTVEALLELGADVNAQDSSGDTP 676
BLAST of mRNA_P-wetherbeei_contig138.4.1 vs. uniprot
Match: A0A8J1Y0K7_OWEFU (Ofus.G112493 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1Y0K7_OWEFU) HSP 1 Score: 61.6 bits (148), Expect = 5.300e-7 Identity = 34/74 (45.95%), Postives = 44/74 (59.46%), Query Frame = 2
Query: 347 PLHHCAQLNLPTTAHKLVTWGADVNARDKVMMTPLMLAARLGHTIMVELLGGQLRADVDAQDRAGWTALHYAVS 568
P+H +N P T L+ G DVNARD MTPL+LAA G +++ L QL+AD+ QD G T +H AVS
Sbjct: 375 PIHRAVLVNQPDTVAYLIEQGTDVNARDGRSMTPLILAATRGSSMVARRLI-QLKADITCQDEQGRTFIHAAVS 447
BLAST of mRNA_P-wetherbeei_contig138.4.1 vs. uniprot
Match: A0A7Z6TNS3_9ACTN (Uncharacterized protein n=6 Tax=Streptomyces TaxID=1883 RepID=A0A7Z6TNS3_9ACTN) HSP 1 Score: 58.5 bits (140), Expect = 6.800e-7 Identity = 42/131 (32.06%), Postives = 65/131 (49.62%), Query Frame = 2
Query: 233 GRTALSLAVKAMREDIAFLIIYCNGVDVNKPDSATGLSPLHHCAQLNLPTTAHKLVTWGADVNA-RDKVMMTPLMLAARLGHTIMVELLGGQLRADVDAQDRAGWTALHYAVSCDRGGAVEALLALDADAT 622
GR+AL LAV+ D+ L++ + L+P+ A L+ G A RD++ PL+LAA LGHT +V++L + AD++ +D G + L +AVS + AV LL A+ T
Sbjct: 5 GRSALDLAVQEGHADVVRLLLAAGAEPEGRAGPYHELTPMTEAAMFGRAAVVEALIDAGVSTGAQRDRIPYVPLVLAATLGHTDVVDVLLDR-GADIEDRDFKGRSPLEWAVSFGQPAAVRLLLRRGAEPT 134
BLAST of mRNA_P-wetherbeei_contig138.4.1 vs. uniprot
Match: A0A2U4EU85_9SPIR (Ankyrin repeat-containing protein n=4 Tax=Brachyspira hampsonii TaxID=1287055 RepID=A0A2U4EU85_9SPIR) HSP 1 Score: 60.1 bits (144), Expect = 1.280e-6 Identity = 41/117 (35.04%), Postives = 62/117 (52.99%), Query Frame = 2
Query: 305 GVDVNKPDSATGLSPLHHCAQLNLPTTAHKLVTWGADVNARDKVMMTPLMLAARLGHTIMVELLGGQLRADVDAQDRAGWTALHYAVSCDRGGAVEALLALDADATIADAKGKLPAD 655
G DVN D + L+ A N + L+ +N++ K +TPL +A + ++ L L+AD++AQD GWTAL+YA + ++ A + LL L AD IA+ G PAD
Sbjct: 341 GADVNASDEEGWSTFLYAAAFGNSSMLRNILLKNRNLINSKTKDNVTPLHMAVVYDNIDNIKYLVRNLKADINAQDDDGWTALYYAAANNKKEAYDLLLRLGADKNIANNDGLKPAD 457
BLAST of mRNA_P-wetherbeei_contig138.4.1 vs. uniprot
Match: UPI000D72A07E (ankyrin repeat domain-containing protein 2-like n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72A07E) HSP 1 Score: 57.4 bits (137), Expect = 1.340e-6 Identity = 51/126 (40.48%), Postives = 66/126 (52.38%), Query Frame = 2
Query: 194 NLAMQVAQLFSL*GRTALSLAVKAMR--EDIAFLIIYCNGVDVNKPDSATGLSPLHHCAQLNLPTTAHKLVTWGADVNARDKVMMTPLMLAA-RLGHTIMVELLGGQLRADVDAQDRAGWTALHYA 562
NL V+++F L R+ L A++A R E+I L+I G DV D S +H A +LP L GADVNARDK + TPL A R H M LL + DV A++R +TALH A
Sbjct: 21 NLGANVSRIFGL-YRSPLGAALEANRKEENICILLIE-RGADVRVVDGLDR-SYMHIAATYDLPNVIGVLAARGADVNARDKHLDTPLHNAVQRKNHRAMEALLEVK-GIDVRAKNRLDYTALHLA 142
BLAST of mRNA_P-wetherbeei_contig138.4.1 vs. uniprot
Match: E9HX73_DAPPU (Uncharacterized protein (Fragment) n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9HX73_DAPPU) HSP 1 Score: 58.2 bits (139), Expect = 4.060e-6 Identity = 59/157 (37.58%), Postives = 82/157 (52.23%), Query Frame = 2
Query: 233 GRTALSLAVKAMR-EDIAFLIIYCNGVDVNKPDSATGLSPLHHCAQLNLPTTAHK-LVTWGADVNARDKVM--MTPLMLAARLGHTIMV---ELLGGQLRADVDAQDRAGWTALHYAVSCDRGGAVEALLALDADATIADAKGKLP----ADWAQYL 670
G AL LA K D F I+ ++N+ DS G +PLH CA L TA K L+ A VNA + +T L LAA L I + E++ G+ +A+++AQD+ G TALH A+ ++ LL ADATI + G +P ADW Q +
Sbjct: 45 GEIALHLAAKWPDIGDELFRILLGKTTEINRLDSK-GRTPLH-CALLFKCVTASKILLNKDATVNAEAQTCHNLTALHLAA-LWSDIPINLFEIILGKSKANLNAQDKYGRTALHCAILSKSETLIDKLLDAKADATIHEQDGLIPLHLAADWRQPI 198 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig138.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig138.4.1 >prot_P-wetherbeei_contig138.4.1 ID=prot_P-wetherbeei_contig138.4.1|Name=mRNA_P-wetherbeei_contig138.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp MREDIAFLIIYCNGVDVNKPDSATGLSPLHHCAQLNLPTTAHKLVTWGADback to top mRNA from alignment at P-wetherbeei_contig138:11677..12696+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig138.4.1 ID=mRNA_P-wetherbeei_contig138.4.1|Name=mRNA_P-wetherbeei_contig138.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1020bp|location=Sequence derived from alignment at P-wetherbeei_contig138:11677..12696+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig138:11677..12696+ >mRNA_P-wetherbeei_contig138.4.1 ID=mRNA_P-wetherbeei_contig138.4.1|Name=mRNA_P-wetherbeei_contig138.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig138:11677..12696+ (Phaeothamnion wetherbeei SAG_119_79)back to top |