mRNA_P-wetherbeei_contig1378.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1378.4.1 vs. uniprot
Match: A0A3P3YIS8_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YIS8_PLABS) HSP 1 Score: 63.5 bits (153), Expect = 4.890e-10 Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 1
Query: 13 HTDLVRLILEFLSTES-PEAARVLERDSGLTLVLYGPDIEFLRELILDGRWDDA 171
H +++ LIL++L PEA R LER+S LTL YG +++FLR+L+LDG+WDDA
Sbjct: 7 HDEIILLILDYLKRHGCPEAMRCLERESMLTLETYGREVDFLRQLVLDGQWDDA 60
BLAST of mRNA_P-wetherbeei_contig1378.4.1 vs. uniprot
Match: A0A443SR89_9ACAR (WD repeat-containing protein 47-like protein (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SR89_9ACAR) HSP 1 Score: 59.3 bits (142), Expect = 1.510e-8 Identity = 32/72 (44.44%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 10 SHTDLVRLILEFLSTESPEAARV-LERDSGLTLVLYGPDIEFLRELILDGRWDDAVILIEVVLLFLLFQSEE 222
S D++R+ILEFLS + +++ +ER++G+ LY D+ FLR+LILDG+WDDA+ IE + + F S+E
Sbjct: 10 SEEDVIRMILEFLSNRALSISQLSVERETGVYNGLYSDDLLFLRQLILDGQWDDALEFIEPLSIINGFNSKE 81
BLAST of mRNA_P-wetherbeei_contig1378.4.1 vs. uniprot
Match: A0A813VHE8_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813VHE8_9BILA) HSP 1 Score: 55.5 bits (132), Expect = 3.530e-7 Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 19 DLVRLILEFLSTESPEAARV-LERDSGLTLVLYGPDIEFLRELILDGRWDDAV 174
D+++LILEFLS A + LER++G+ Y DI FLR+LILDG+WDDA+
Sbjct: 19 DIIKLILEFLSNRDLNIAMLDLERETGIINHQYSDDILFLRQLILDGQWDDAL 71
BLAST of mRNA_P-wetherbeei_contig1378.4.1 vs. uniprot
Match: A0A7R9PU16_9ACAR (Hypothetical protein (Fragment) n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9PU16_9ACAR) HSP 1 Score: 55.1 bits (131), Expect = 4.760e-7 Identity = 25/65 (38.46%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 1 MAASHTDLVRLILEFLSTESPEAARV-LERDSGLTLVLYGPDIEFLRELILDGRWDDAVILIEVV 192
+A D++RL+LEFLS +++ +ER++GL ++ D+ FLR+LILDG+WDD + ++ +
Sbjct: 3 LAVREEDVIRLVLEFLSVRELSISQLSVERETGLNNGVFSDDLLFLRQLILDGQWDDVLAFVQPI 67
BLAST of mRNA_P-wetherbeei_contig1378.4.1 vs. uniprot
Match: R7UJY5_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UJY5_CAPTE) HSP 1 Score: 54.7 bits (130), Expect = 6.450e-7 Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 16 TDLVRLILEFLSTESPEAARV-LERDSGLTLVLYGPDIEFLRELILDGRWDDAV 174
TD+V+LILEFL + + LER+SGL +Y D+ FLR+LILDG+WDD +
Sbjct: 8 TDVVKLILEFLQNRQLNISMLNLERESGLINGVYSDDMLFLRQLILDGQWDDIL 61
BLAST of mRNA_P-wetherbeei_contig1378.4.1 vs. uniprot
Match: A0A3P6SPC1_LITSI (Uncharacterized protein n=1 Tax=Litomosoides sigmodontis TaxID=42156 RepID=A0A3P6SPC1_LITSI) HSP 1 Score: 54.7 bits (130), Expect = 6.610e-7 Identity = 25/63 (39.68%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 1 MAASHTDLVRLILEFLSTESPEAARV-LERDSGLTLVLYGPDIEFLRELILDGRWDDAVILIE 186
++ S D+++++LEFL T S A++ LER++G+ + D+ FLR+L+LDG+WD+A+ +E
Sbjct: 7 ISVSERDIIKIVLEFLETRSLHIAQLSLERETGIINGDFSDDVLFLRQLVLDGQWDNALDFVE 69
BLAST of mRNA_P-wetherbeei_contig1378.4.1 vs. uniprot
Match: V4BAF8_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BAF8_LOTGI) HSP 1 Score: 54.3 bits (129), Expect = 8.780e-7 Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 1 MAASHTDLVRLILEFLSTESPEAARV-LERDSGLTLVLYGPDIEFLRELILDGRWDDAV 174
+ + TD+VRL+ EFL + + LER++G+ +Y D+ FLR+LILDG+WDD +
Sbjct: 6 LVVNETDIVRLVSEFLQNRQLNISMMSLERETGIINGMYSDDMLFLRQLILDGQWDDVI 64
BLAST of mRNA_P-wetherbeei_contig1378.4.1 vs. uniprot
Match: T1L4M5_TETUR (Uncharacterized protein n=2 Tax=Tetranychus urticae TaxID=32264 RepID=T1L4M5_TETUR) HSP 1 Score: 54.3 bits (129), Expect = 9.010e-7 Identity = 27/57 (47.37%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 19 DLVRLILEFLSTESPEAARV-LERDSGLTLVLYGPDIEFLRELILDGRWDDAVILIE 186
D+VR++LEFL+ +++ LER++G+ LY D+ FLR+LILDG+WDD + IE
Sbjct: 16 DVVRMVLEFLNNRELSISQLSLERETGVHNGLYSDDLLFLRQLILDGQWDDCLQFIE 72
BLAST of mRNA_P-wetherbeei_contig1378.4.1 vs. uniprot
Match: A0A498S2V2_ACAVI (Uncharacterized protein n=1 Tax=Acanthocheilonema viteae TaxID=6277 RepID=A0A498S2V2_ACAVI) HSP 1 Score: 54.3 bits (129), Expect = 9.040e-7 Identity = 27/60 (45.00%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 10 SHTDLVRLILEFLSTESPEAARV-LERDSGLTLVLYGPDIEFLRELILDGRWDDAVILIE 186
S D++++ILEFL T S A++ LER++G+ + D+ FLR+LILDG+WD+A+ +E
Sbjct: 10 SEKDVIKIILEFLETRSLHIAQLSLERETGIINGDFSDDVLFLRQLILDGQWDNALDFVE 69
BLAST of mRNA_P-wetherbeei_contig1378.4.1 vs. uniprot
Match: A0A267GU53_9PLAT (Uncharacterized protein (Fragment) n=5 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GU53_9PLAT) HSP 1 Score: 54.3 bits (129), Expect = 9.070e-7 Identity = 26/58 (44.83%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 16 TDLVRLILEFLSTESPEAARV-LERDSGLTLVLYGPDIEFLRELILDGRWDDAVILIE 186
+D+++L+LEFL++ + + LER++G+ +Y D+ FLR+LILDG+WDDA+ L+E
Sbjct: 20 SDIIKLLLEFLNSRDLCISLLSLERETGIVNGIYSEDMLFLRQLILDGQWDDALELVE 77 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1378.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1378.4.1 >prot_P-wetherbeei_contig1378.4.1 ID=prot_P-wetherbeei_contig1378.4.1|Name=mRNA_P-wetherbeei_contig1378.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=74bp MAASHTDLVRLILEFLSTESPEAARVLERDSGLTLVLYGPDIEFLRELILback to top mRNA from alignment at P-wetherbeei_contig1378:6659..6880+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1378.4.1 ID=mRNA_P-wetherbeei_contig1378.4.1|Name=mRNA_P-wetherbeei_contig1378.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=222bp|location=Sequence derived from alignment at P-wetherbeei_contig1378:6659..6880+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1378:6659..6880+ >mRNA_P-wetherbeei_contig1378.4.1 ID=mRNA_P-wetherbeei_contig1378.4.1|Name=mRNA_P-wetherbeei_contig1378.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=222bp|location=Sequence derived from alignment at P-wetherbeei_contig1378:6659..6880+ (Phaeothamnion wetherbeei SAG_119_79)back to top |