mRNA_P-wetherbeei_contig13723.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13723.1.1 vs. uniprot
Match: D8LPN4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPN4_ECTSI) HSP 1 Score: 285 bits (728), Expect = 7.440e-88 Identity = 152/301 (50.50%), Postives = 202/301 (67.11%), Query Frame = 1
Query: 1 RPEPGGAETEELRRSYRATMLLACDQPSEALLAFLGQRAREITSAAFKVFWPGARGSFHHACRVIDYMLRFHADQVLDCVGRNKKSLERYLGPMLRWTEWPPVCETFVKLVALSGNGSGGPNGSGXXXXXXXSQYQSSPPGKWKLYSGLAEWRLLPLLARGVTAADQSPAHASSCADLLLEVVDRLSKDENGELLLQPIGHSPEFIDGLVDAAI--GTPTAGSGAAXXXXXXXGLERRTDAARTLVGLVEKAAEENLVCNPGRVMAFTTQNNT--VPNRLNSVKPLLHERLQARFADLCTA 891
RPEPG +E+L+RS+RATMLLA +PS+ FL ++ARE+T+A KVFWP A+GS HHAC V+DY+LR +AD+V + +GR+++SLER+LGPMLRW E+ PV ET VKL+ G G G+ + YQ+S P KW+LYSGLA+WR L +A + + S ++AS+CADLLLEVVDRLS D+NGELLLQPIG+ E +DGL A+ G P LERRTD+ARTL+G+ +KAA+ N+V R + +Q T VPNRL+SV+ LLHE+L+ C A
Sbjct: 113 RPEPGDEVSEQLKRSFRATMLLANSEPSDNHRTFLAKKARELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERHLGPMLRWAEYSPVSETMVKLLTFPSVG-GAVTGAA-------ATYQTSAPSKWRLYSGLADWRFLLRVAENIFDRECSDSYASACADLLLEVVDRLSSDDNGELLLQPIGYCKELVDGLAAMAVDQGLP---------------LERRTDSARTLLGITQKAADANIVFVNARTSMYDSQPTTTVVPNRLSSVRELLHEQLRTWLPKFCVA 390
BLAST of mRNA_P-wetherbeei_contig13723.1.1 vs. uniprot
Match: A0A835Z422_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z422_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.350e-64 Identity = 138/307 (44.95%), Postives = 177/307 (57.65%), Query Frame = 1
Query: 1 RPEPGGAETEELRRSYRATMLLACDQPSEALLAFLGQRAREITSAAFKVFWPGARGSFHHACRVIDYMLRFHADQVLDCVGRNKKSLERYLGPMLRWTEWPPVCETFVKLVALSGNGSGGPNGSGXXXXXXXSQYQSSPPGKWKLYSGLAEWRLLPLLA-----------RGVTAADQSPAHASSCADLLLEVVDRLSKDENGELLLQPIGHSPEFIDGLVDAAIGTPTAGSGAAXXXXXXXGLERRTDAARTLVGLVEKAAEENLVCNPGRVMAFT--TQNNTVPNRLNSVKPLLHERLQARFADL 882
RPEPG T EL+RSYRATMLL+ DQPS ALL+FL +RAR IT++ FKVFW A+GS HHACRV+D++LR ADQ+ T+ SG G G+ YQ++P +WK+YS LA+WR L +LA R V AA +PAHAS+CAD+LLE V+ LS DENGELLLQP+ H PE ++GLVD A+ AG+ +RTDAAR LVGL++KAA + + C +VM T Q +PNRL SV+ L+H L+ R AD+
Sbjct: 120 RPEPGDELTYELKRSYRATMLLSSDQPSNALLSFLAKRARVITTSIFKVFWRSAKGSLHHACRVLDHLLRHQADQL-----------------------------TYPSAAGCSGMVGAGMRGN-FNGATCAIPYQATPQSRWKMYSSLADWRFLLVLASHVYAAQYPDVRTVPAAQSTPAHASACADMLLEAVEVLSADENGELLLQPLAHCPELVNGLVDIAL---AAGADRT----------QRTDAARVLVGLIQKAAPDQIAC---QVMRPTGPQQAALIPNRLKSVRTLMHRLLRVRLADI 380
BLAST of mRNA_P-wetherbeei_contig13723.1.1 vs. uniprot
Match: A0A3F2S3Z1_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3Z1_9STRA) HSP 1 Score: 184 bits (467), Expect = 1.180e-49 Identity = 107/288 (37.15%), Postives = 162/288 (56.25%), Query Frame = 1
Query: 25 TEELRRSYRATMLLACDQPSEALLAFLGQRAREITSAAFKVFWPGARGSFHHACRVIDYMLRFHADQVLDCVGRNKKSLERYLGPMLRWTEWPPVCETFVKLVALSGNGSGGPNGSGXXXXXXXSQYQSSPPGKWKLYSGLAEWRLLPLLARGVTAADQSPAHASSCADLLLEVVDRLSKDENGELLLQPIGHSPEFIDGLVDAAIGTPTAGSGAAXXXXXXXGLERRTDAARTLVGLVEKAAEENLVCNP-GRVMAF-TTQNNTVPNRLNSVKPLLHERLQARFADL 882
T EL SYRATMLL D ++ALL FLG +++ +T F VF ++G+ HACR+IDY+LRFH D V D +G + +++ERY+G ML + E PV E F+ LV P+ + Y S+PP KW + LAEW++L +LA V + + H AD+ +E++DRL+ DENG+LLLQP + PE ++GL+ AA+ P A + +RT A + + L++K+ E + P +F T N VPN+L ++ ++E ++ DL
Sbjct: 105 TPELLASYRATMLLTNDDTADALLTFLGDKSKLLTRCIFPVFQRNSKGNLRHACRIIDYLLRFHLDDVYDVLGEDSQTVERYMGSMLPYLEHAPVAELFLTLVCK-------PHSAAVMRF-----YASTPPKKWAFFRALAEWKVLLVLANHVCSVEFGETHTIGAADVFVELLDRLAADENGQLLLQPAAYIPELLEGLIRAAV-EPEDNKSATPQRT----VGQRTAAMKCVFRLLQKSTLEKVQGPPTSPYQSFGATIVNLVPNQLAPLREKIYELVEQHLGDL 375
BLAST of mRNA_P-wetherbeei_contig13723.1.1 vs. uniprot
Match: A0A0P1ALB9_PLAHL (Armadillo-type fold n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ALB9_PLAHL) HSP 1 Score: 182 bits (462), Expect = 5.060e-49 Identity = 105/288 (36.46%), Postives = 164/288 (56.94%), Query Frame = 1
Query: 25 TEELRRSYRATMLLACDQPSEALLAFLGQRAREITSAAFKVFWPGARGSFHHACRVIDYMLRFHADQVLDCVGRNKKSLERYLGPMLRWTEWPPVCETFVKLVALSGNGSGGPNGSGXXXXXXXSQYQSSPPGKWKLYSGLAEWRLLPLLARGVTAADQSPAHASSCADLLLEVVDRLSKDENGELLLQPIGHSPEFIDGLVDAAIGTPTAGSGAAXXXXXXXGLERRTDAARTLVGLVEKAAEENLVCNP-GRVMAF-TTQNNTVPNRLNSVKPLLHERLQARFADL 882
T EL SYRATM+LA D ++ALL FLG +++ +T F+VF ++GS HACRVIDY+LRF+ D V D +G+N K+++RY+G +L + PV E F+ LV + + Y S+PP KW + LAEW++L +LA V + + H AD+ +E+VDRL+ DENG+LLLQP + PE ++GL+ AA+ + S A +RT A + + L++K++ E + P +F T N VPN+L+ ++ ++ ++ +L
Sbjct: 89 TPELVASYRATMMLANDDTADALLTFLGNKSKLLTRCLFQVFQNDSQGSLRHACRVIDYLLRFNLDDVYDVLGKNAKTVQRYMGALLPYLGDAPVAELFLTLVCKPHSAT------------IMRLYASTPPKKWAFFRSLAEWKMLLVLASHVCSNEYGETHTIGAADVFVELVDRLAADENGQLLLQPAAYCPEVLEGLIRAAVESEDDNSTAVQRTAG-----QRTAAIKCVYRLLQKSSLEKVQGPPTSPYQSFGATIVNLVPNQLSPLREKIYTLVEQHLGEL 359
BLAST of mRNA_P-wetherbeei_contig13723.1.1 vs. uniprot
Match: A0A2P4X1A8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X1A8_9STRA) HSP 1 Score: 184 bits (466), Expect = 6.110e-49 Identity = 106/288 (36.81%), Postives = 164/288 (56.94%), Query Frame = 1
Query: 25 TEELRRSYRATMLLACDQPSEALLAFLGQRAREITSAAFKVFWPGARGSFHHACRVIDYMLRFHADQVLDCVGRNKKSLERYLGPMLRWTEWPPVCETFVKLVALSGNGSGGPNGSGXXXXXXXSQYQSSPPGKWKLYSGLAEWRLLPLLARGVTAADQSPAHASSCADLLLEVVDRLSKDENGELLLQPIGHSPEFIDGLVDAAIGTPTAGSGAAXXXXXXXGLERRTDAARTLVGLVEKAAEENLVCNP-GRVMAF-TTQNNTVPNRLNSVKPLLHERLQARFADL 882
T ELR SYRATMLL D ++ALL FLG +++ +T F F A+G+ H CRVID +LRF+ D V D +G++ K+++RY+G ML + E PV E F+ LV P+ + Y S+PP KW + LAEW++L +LA V + + AH AD+ +E++DRL+ DENG+LLLQP + PE ++GL+ AA+ + S A + +RT A + + L++K+ E + P +F T N VPN+L+ ++ ++E ++ +L
Sbjct: 437 TPELRTSYRATMLLTNDDTADALLTFLGDKSKLLTRCLFPAFQRDAKGNLRHVCRVIDQLLRFYLDDVYDVLGKDAKTVQRYMGAMLPYLEHAPVAELFLTLVCK-------PHSAAVMRF-----YASTPPKKWAFFRALAEWKVLLVLANHVCSVEYEEAHTIGAADVFIELLDRLAADENGQLLLQPAAYCPELLEGLIRAAVEPEDSKSKAPQRT-----VGQRTAAMKCVFRLLQKSMLEKVQGPPTSPYQSFGATIVNLVPNQLSPLREKIYELVELHLGEL 707
BLAST of mRNA_P-wetherbeei_contig13723.1.1 vs. uniprot
Match: A0A3M6VW11_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VW11_9STRA) HSP 1 Score: 181 bits (458), Expect = 2.010e-48 Identity = 104/288 (36.11%), Postives = 162/288 (56.25%), Query Frame = 1
Query: 25 TEELRRSYRATMLLACDQPSEALLAFLGQRAREITSAAFKVFWPGARGSFHHACRVIDYMLRFHADQVLDCVGRNKKSLERYLGPMLRWTEWPPVCETFVKLVALSGNGSGGPNGSGXXXXXXXSQYQSSPPGKWKLYSGLAEWRLLPLLARGVTAADQSPAHASSCADLLLEVVDRLSKDENGELLLQPIGHSPEFIDGLVDAAIGTPTAGSGAAXXXXXXXGLERRTDAARTLVGLVEKAAEENLVCNP-GRVMAF-TTQNNTVPNRLNSVKPLLHERLQARFADL 882
TEEL +SYRATMLL D +EALL FLG +++ +T F+VF A+G+ HACRVID +LRF+ D V D +G++ ++ RY+G ML + E PV E F+ LV P+ + Y S+PP KW + L+EW++L +LA V + + H AD+ +E++DRL+ DENG+LLLQP + PE ++GL+ AA+ + + +RT A + + L++K+ E + P +F T N VPN+L ++ ++E ++ +L
Sbjct: 94 TEELVKSYRATMLLTNDDTAEALLTFLGDKSKLLTRCLFRVFQCDAKGNLRHACRVIDQLLRFYLDDVYDVLGKDASTVARYMGAMLPYLEHAPVAELFLTLVCK-------PHSAAAMRF-----YTSTPPKKWAFFRALSEWKVLLVLANHVCSTEYGETHTVGAADVFVELLDRLAADENGQLLLQPAAYCPELLEGLIRAAVELEDS------KKTMQRSVGQRTAAMKCVFRLLQKSTLEKVQGPPTSPYQSFGATIVNLVPNQLGPLREKIYELVEQHLGEL 363
BLAST of mRNA_P-wetherbeei_contig13723.1.1 vs. uniprot
Match: M4C5A3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C5A3_HYAAE) HSP 1 Score: 180 bits (456), Expect = 2.850e-48 Identity = 105/288 (36.46%), Postives = 163/288 (56.60%), Query Frame = 1
Query: 25 TEELRRSYRATMLLACDQPSEALLAFLGQRAREITSAAFKVFWPGARGSFHHACRVIDYMLRFHADQVLDCVGRNKKSLERYLGPMLRWTEWPPVCETFVKLVALSGNGSGGPNGSGXXXXXXXSQYQSSPPGKWKLYSGLAEWRLLPLLARGVTAADQSPAHASSCADLLLEVVDRLSKDENGELLLQPIGHSPEFIDGLVDAAIGTPTAGSGAAXXXXXXXGLERRTDAARTLVGLVEKAAEENLVCNP-GRVMAF-TTQNNTVPNRLNSVKPLLHERLQARFADL 882
T EL SYRATMLL D +EALL FLG +++ +T F VF A+G+ HACRVID +LRF+ D V D +G++ K++ERY+G ML + E+ PV E F+ ++ P+ + Y S+PP KW + LAEW++L +LA V + + H+ AD+ +E++DRL+ DENG+LLLQP + E ++GL+ AA+ P A + +RT A + + L++K+ E + P +F T N VPN+L ++ +++ ++ DL
Sbjct: 98 TPELLTSYRATMLLTNDDTAEALLTFLGDKSKLLTRCFFAVFDGDAQGNLRHACRVIDQLLRFYLDDVYDVLGKDAKTVERYMGAMLPYLEYAPVAELFLTIICK-------PHSAAVMRF-----YTSTPPKKWAFFRALAEWKVLLVLATHVWSREYGETHSIGAADVFVELLDRLAADENGQLLLQPAAYCSELLEGLISAAV-EPDCNKAAPQRT-----VAQRTAAMKCVFRLLQKSKLEKVQGPPTSPYQSFGATIVNLVPNQLEPLREKIYQLVEQHLGDL 367
BLAST of mRNA_P-wetherbeei_contig13723.1.1 vs. uniprot
Match: W7TU88_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU88_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.230e-46 Identity = 105/289 (36.33%), Postives = 146/289 (50.52%), Query Frame = 1
Query: 34 LRRSYRATMLLACDQPSEALLAFLGQRAREITSAAFKVFWPGARGSFHHACRVIDYMLRFHADQVLDCVGRNKKSLERYLGPMLRWTEWPPVCETFVKLVALSGNGSGGPNGSGXXXXXXXSQYQSSPPGKWKLYSGLAEWRLLPLLARGVTAADQSPAHASSCADLLLEVVDRLSKDENGELLLQPIGHSPEFIDGLVDAAIGTPTAGSGAAXXXXXXXGLERRTDAARTLVGLVEKAAEENLVCNPGRVMAFTTQNNT-----VPNRLNSVKPLLHERLQARFADLC 885
L RSY A +LLA +PS LL FL ++ IT A F+V P +RG HHACRV+DY+LR + L VG N+ S++R+LGPM+R PPV E +K++ + QYQ SP KW+L+ LA+WR L +LA V+ + P S+ AD ++++D L+ DENGELLLQPI H PE + GL D A+ +R D R L+ L ++ E + + + F + VPN+ SV L L DLC
Sbjct: 248 LSRSYHAMLLLASAEPSVQLLKFLSKKITVITDAMFEVLSPRSRGCIHHACRVMDYLLRSLTEPFLRHVGCNRGSVKRFLGPMVRNLAEPPVAELLMKILTAPSPAN------------QMGQYQISPVAKWRLFESLADWRFLIVLAGEVSISGGHPQQVSAAADFFIDLLDSLATDENGELLLQPIAHCPELLGGLFDRALDLNAPSL-------------QRGDCVRVLLALAGRSCEPEIPASSMALTHFQIPSGLASLPMVPNQFRSVHTLFRSTLATHLRDLC 511
BLAST of mRNA_P-wetherbeei_contig13723.1.1 vs. uniprot
Match: A0A2D4CJ12_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJ12_PYTIN) HSP 1 Score: 174 bits (440), Expect = 6.340e-46 Identity = 102/282 (36.17%), Postives = 153/282 (54.26%), Query Frame = 1
Query: 25 TEELRRSYRATMLLACDQPSEALL---AFLGQRAREITSAAFKVFWPGARGSFHHACRVIDYMLRFHADQVLDCVGRNKKSLERYLGPMLRWTEWPPVCETFVKLVALSGNGSGGPNGSGXXXXXXXSQYQSSPPGKWKLYSGLAEWRLLPLLARGVTAADQSPAHASSCADLLLEVVDRLSKDENGELLLQPIGHSPEFIDGLVDAAIGTPTAGSGAAXXXXXXXGLERRTDAARTLVGLVEKAAEENLVCNP-GRVMAF-TTQNNTVPNRLNSVKPLLHE 855
T EL SYRATMLL + SEA++ FL ++++ I F +F +RG+ H CRVID +LR H D V D VG +++RY+G ML++ E PV E F+ L+ N + Y SSP KW+L+ L+EW++L +LA V D S H AD+ +E++DRLS DENG LLLQP+ H P+ ++GL+D A+ + +RT A R ++ L++++ +E + P +F T N VPN+L S++ + E
Sbjct: 94 TPELLASYRATMLLTNEDSSEAVIFAMPFLAKKSKLIAKCVFPIFQQNSRGNLRHGCRVIDRLLRLHLDDVYDVVGSTTATVKRYMGAMLQYIEHAPVAEVFLTLICKPHNAA------------LMRYYTSSPQKKWQLFRALSEWKVLLVLAEHVYGTDYSEDHNIGAADVFIELLDRLSADENGALLLQPVAHCPQLLEGLIDTAVDNQRSQG-------------QRTAAMRCVLRLLQRSTQEKVQGPPTSPYQSFGATIVNLVPNQLASLRENVFE 350
BLAST of mRNA_P-wetherbeei_contig13723.1.1 vs. uniprot
Match: A0A5D6Y2H7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2H7_9STRA) HSP 1 Score: 172 bits (435), Expect = 4.100e-45 Identity = 104/281 (37.01%), Postives = 153/281 (54.45%), Query Frame = 1
Query: 25 TEELRRSYRATMLLACDQPSEALLAFLGQRAREITSAAFKVFWPGARGSFHHACRVIDYMLRFHADQVLDCVGRNKKSLERYLGPMLRWTEWPPVCETFVKLVALSGNGSGGPNGSGXXXXXXXSQYQSSPPGKWKLYSGLAEWRLLPLLARGVTAADQSPAHASSCADLLLEVVDRLSKDENGELLLQPIGHSPEFIDGLVDAAIGTPTAGSGAAXXXXXXXGLERRTDAARTLVGLVEKAAEENLVCNPGRVMAFTTQNNTVPNRLNSVKPLLHERLQA 867
T ELRRS+RATMLL D S+AL+ FL +++ +T F VF ARG+ HACRVIDY+LR + D V D VGR+ ++ RY+GPML + + V E F+ +V + + Y SSPP KW + L++W+LL +LA V + S H + AD+ +E++DRL+ D+NG LLLQP + PE + GLVDAA+ P G +RT A + + L++K+ E + P + + T+ N + + L ER+ A
Sbjct: 113 TGELRRSFRATMLLTNDDASDALITFLPRKSALLTKCIFPVFQRDARGNLRHACRVIDYLLRMYLDDVYDVVGRDAATVARYMGPMLEFIDHAYVAEAFLTMVCKPHSAA------------LMRYYASSPPKKWAFFRALSDWKLLLVLAEHVHSRRYSEKHNAGAADVFVELLDRLAADDNGGLLLQPAAYCPELLAGLVDAAV-DPGRTPG------------QRTGAMKCVFRLLQKSTTEKVQGPP--TSPYQSFGGTIVNLVANQLAPLRERVFA 366 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13723.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13723.1.1 >prot_P-wetherbeei_contig13723.1.1 ID=prot_P-wetherbeei_contig13723.1.1|Name=mRNA_P-wetherbeei_contig13723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=297bp RPEPGGAETEELRRSYRATMLLACDQPSEALLAFLGQRAREITSAAFKVFback to top mRNA from alignment at P-wetherbeei_contig13723:304..1736- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13723.1.1 ID=mRNA_P-wetherbeei_contig13723.1.1|Name=mRNA_P-wetherbeei_contig13723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1433bp|location=Sequence derived from alignment at P-wetherbeei_contig13723:304..1736- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13723:304..1736- >mRNA_P-wetherbeei_contig13723.1.1 ID=mRNA_P-wetherbeei_contig13723.1.1|Name=mRNA_P-wetherbeei_contig13723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=891bp|location=Sequence derived from alignment at P-wetherbeei_contig13723:304..1736- (Phaeothamnion wetherbeei SAG_119_79)back to top |