mRNA_P-wetherbeei_contig13459.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13459.1.1 vs. uniprot
Match: D7FW44_ECTSI (Aromatic amino acid permease n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW44_ECTSI) HSP 1 Score: 163 bits (412), Expect = 3.490e-44 Identity = 103/216 (47.69%), Postives = 133/216 (61.57%), Query Frame = 1
Query: 10 VCGMFVASNYLLLVAYISQGSNIVASVLGSEACGPFL--CVSQPALTPLLFGVVLGSARLFAPPAAANAANNALVVAIAASFAGLLAVGLPGVEVGVLTATFDVAAAPAMLPVALTATVFQNIVPVVLKQLKGDLQAVRAALTWGSGIPIGMYLLWDAVILGQRTAPAISIDGGGAVG-----SAASGAVPALPLLVSVFSFAALVTSFWGATASL 636
+C F+ SNYLL+VAYI QG++ + + E CGP C+ L PLLF ++GS L+ P AAN ALV IA SF GL+A GLP V+V +L T D + PAMLPVAL A FQN+VP V K L GD + ++A+L GSG+P+ Y+LW+AV+LG S+D AV A + PAL LVSVFS +A++TSFWGA SL
Sbjct: 147 MCAAFLMSNYLLMVAYICQGASSLP-LFRPEFCGPVFTSCMKDFHLAPLLFTGLVGSVSLWGPARFVEAANTALVGLIAISFGGLVATGLPRVDVALLGLTPDASTLPAMLPVALCALTFQNVVPAVSKNLNGDARKIKASLAIGSGLPLMTYILWNAVVLGSTG----SLDPNSAVEMVSPLDALAATSPALASLVSVFSISAIITSFWGAAFSL 357
BLAST of mRNA_P-wetherbeei_contig13459.1.1 vs. uniprot
Match: A0A836CN59_9STRA (Tryptophan/tyrosine permease family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN59_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.400e-42 Identity = 107/220 (48.64%), Postives = 128/220 (58.18%), Query Frame = 1
Query: 1 GAAVCGMFVASNYLLLVAYISQGSNIVASV-----LGSEACGPFLCVSQPALTPLLFGVVLGSARLFAPPAAANAANNALVVAIAASFAGLLAVGLPGVEVGVLTATFDVAAAPAMLPVALTATVFQNIVPVVLKQLKGDLQAVRAALTWGSGIPIGMYLLWDAVILGQRTAPAISIDGGGAVGSAASGAVPALPLLVSVFSFAALVTSFWGATASLSEE 645
GA V F+A NYLL+VAYISQGS++V ++ LG P AL P+LF +G L+ A + AN ALV I ASFA L+A G P V+ L AA P +LPV L A FQNIVPVV L GDL VRAAL G+G+P+ MYL WDAV+LGQR P + G A G V AL V+VFSFAALVTSF+G+ SL E
Sbjct: 199 GALVGAGFIAKNYLLMVAYISQGSHVVGALPVFDGLGGGGAFPD---DAAALLPVLFAAAVGGFGLWGGARAVDGANAALVAVILASFAALVAAGAPHVDAAALLRGAAPAALPPVLPVILCAMTFQNIVPVVTTALGGDLPRVRAALVAGTGVPLLMYLTWDAVMLGQRAPPLAPLYDGAAAALGGGGGVDALGAAVAVFSFAALVTSFFGSCKSLMAE 415
BLAST of mRNA_P-wetherbeei_contig13459.1.1 vs. uniprot
Match: A0A7S0WN86_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WN86_9CHLO) HSP 1 Score: 109 bits (272), Expect = 7.670e-25 Identity = 78/212 (36.79%), Postives = 120/212 (56.60%), Query Frame = 1
Query: 7 AVCGMFVASNYLLLVAYISQGSNIVASVLGSEACGPFLCVSQPALTPLLFGVVLGSARLFAPPAAANAANNALVVAIAASFAGLLAVGLPGVEVGVLTATFDVAAAPAMLPVALTATVFQNIVPVVLKQLKGDLQAVRAALTWGSGIPIGMYLLWDAVILGQRTAPAISIDGGGAVGSAASGAVPALPLLVSVFSFAALVTSFWGATASLSE 642
AV +++ +Y LLVAYIS+ +V LG+ + + F + +G+A P A +AAN+A+VV + A+FAGL+ + P V+ L A + P LPV A V+QN+VPVV+K L D++ VRAA+ GS +P+ M+L+W+AV+LG + +D ++ +A GA +L V FSF A+VTS+ G LS+
Sbjct: 148 AVSALYLFQHYCLLVAYISRAGELVGGALGTSS----------GAGSVGFALGVGTACALLPVAVLDAANSAMVVGVVATFAGLVVLVAPMVQASALLAPPVWSELPHALPVMALAFVYQNVVPVVVKDLGADVRRVRAAIVLGSLLPLAMFLVWEAVVLGAMGGASAGVDPLASL-AAQPGAAGSL---VEGFSFLAIVTSYIGFCLGLSD 345
BLAST of mRNA_P-wetherbeei_contig13459.1.1 vs. uniprot
Match: A0A6V1NZW3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NZW3_HETAK) HSP 1 Score: 110 bits (274), Expect = 1.410e-24 Identity = 78/215 (36.28%), Postives = 115/215 (53.49%), Query Frame = 1
Query: 1 GAAVCGMFVASNYLLLVAYISQGSNIVASVL--GSEACGPFLCVSQPALTPLLFGVVLGSARLFAPPAAANAANNALVVAIAASFAGLLAVGLPGVEVGVLTATFDVAAAPAMLPVALTATVFQNIVPVVLKQLKGDLQAVRAALTWGSGIPIGMYLLWDAVILGQRTAPAISIDGGGAVGSAA------SGAVPALPLLVSVFSFAALVTSFWG 621
G A ++ +Y LLVAY++QG ++A +L G + P L P+ F + G F A + NN V + SF GLL + PG+E+ L D +AAP ++PV A VF N+VPV++ QL+ D +R A+ GS +P+GM+L W+AV+LG A + GG V A SGA+ + VS+FS A++TSF+G
Sbjct: 144 GRAAGAAYLFIHYCLLVAYLAQGGALLADLLLPGQQQSLPEY------LGPVGFCAIFGGLLAFGSEALIESVNNVFVTIVITSFLGLLVLATPGIEISRLFVE-DWSAAPGVVPVTFVALVFHNVVPVIVTQLEADRAKIRQAVLVGSALPLGMFLAWNAVVLGSTDTAAAAAVGGVPVDPLATLRAGSSGAI--VGEAVSIFSLFAIITSFFG 349
BLAST of mRNA_P-wetherbeei_contig13459.1.1 vs. uniprot
Match: A0A7I4ABU8_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4ABU8_PHYPA) HSP 1 Score: 102 bits (255), Expect = 2.300e-22 Identity = 84/220 (38.18%), Postives = 117/220 (53.18%), Query Frame = 1
Query: 13 CGMFVASNYLLLVAYISQGSNIVASVLGSEACGPFLCVSQPALTPLLFGVV-LGSARLFAPPAAANAANNALVVAIAASFAGLLAVGLPGVEVGVLTATFDVAAAPAMLPVALTATVFQNIVPVVLKQLKGDLQAVRAALTWGSGIPIGMYLLWDAVILGQRTAPAISIDGGGAVGS---------AASGAVPALPLLVSVFSFAALVTSFWGATASLSE 642
CG ++ +Y LLVAYI++ S+IV + +G L VS T L G+ GS R+ N LVV I SF L+ VG G++ L T + A P +PV A V+QN+VPVV L+GDL +R A+ G+GIP+ ++L+W+AVILG ++ +D GAV + +ASG V V VFSF A+ TSF G LS+
Sbjct: 52 CGAYLFIHYALLVAYIARSSDIVTNAVGIP-----LWVSATLFTSTLGGLCYFGSQRVI------GVVNGGLVVGILGSFGLLVTVGSSGLDFNSLL-TANWVAVPHSIPVIALAFVYQNVVPVVTTSLEGDLPKIRTAVVLGTGIPLVLFLIWNAVILGTSSS---LVDPSGAVQAISDPLLRLRSASGIVAPT---VEVFSFLAIATSFIGFVLGLSD 253
BLAST of mRNA_P-wetherbeei_contig13459.1.1 vs. uniprot
Match: A0A2K1JWA9_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JWA9_PHYPA) HSP 1 Score: 102 bits (255), Expect = 7.600e-22 Identity = 84/220 (38.18%), Postives = 117/220 (53.18%), Query Frame = 1
Query: 13 CGMFVASNYLLLVAYISQGSNIVASVLGSEACGPFLCVSQPALTPLLFGVV-LGSARLFAPPAAANAANNALVVAIAASFAGLLAVGLPGVEVGVLTATFDVAAAPAMLPVALTATVFQNIVPVVLKQLKGDLQAVRAALTWGSGIPIGMYLLWDAVILGQRTAPAISIDGGGAVGS---------AASGAVPALPLLVSVFSFAALVTSFWGATASLSE 642
CG ++ +Y LLVAYI++ S+IV + +G L VS T L G+ GS R+ N LVV I SF L+ VG G++ L T + A P +PV A V+QN+VPVV L+GDL +R A+ G+GIP+ ++L+W+AVILG ++ +D GAV + +ASG V V VFSF A+ TSF G LS+
Sbjct: 194 CGAYLFIHYALLVAYIARSSDIVTNAVGIP-----LWVSATLFTSTLGGLCYFGSQRVI------GVVNGGLVVGILGSFGLLVTVGSSGLDFNSLL-TANWVAVPHSIPVIALAFVYQNVVPVVTTSLEGDLPKIRTAVVLGTGIPLVLFLIWNAVILGTSSS---LVDPSGAVQAISDPLLRLRSASGIVAPT---VEVFSFLAIATSFIGFVLGLSD 395
BLAST of mRNA_P-wetherbeei_contig13459.1.1 vs. uniprot
Match: A0A7S2V4P3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4P3_9STRA) HSP 1 Score: 101 bits (252), Expect = 2.240e-21 Identity = 85/220 (38.64%), Postives = 113/220 (51.36%), Query Frame = 1
Query: 19 MFVASNYLLLVAYISQGSNIVASVLGSEACGPFLCVSQPALTPLLFG--VVLGSARLFAPPAAANAANNALVVAIAASFAGLLAVGLPGVEVGVLTATFDVAAAPAMLPVALTATVFQNIVPVVLKQLKGDLQAVRAALTWGSGIPIGMYLLWDAVILG---QRTAPAISIDGGGAVGSAASGAVPALPL--------------LVSVFSFAALVTSFWG 621
++V +Y LLVAY++QG I A+ + P + P FG + LGS +L + NNA V + SF GLL V +PGV L D + A M+PV A VF NIVPV+ QL+G++ VR A+ GS IP+ M+L+W+AVILG Q A A A G+AA+G PL L+SVFS A+VTSF G
Sbjct: 221 VYVGLHYCLLVAYMAQGGGIAAAGIRDLTSLPLPSWAGPVGFATAFGGLLALGSEKLV------ESVNNAFVAVVLLSFVGLLTVAVPGVRAERLLDQ-DWSQAYEMIPVMFVALVFHNIVPVIATQLEGNVSKVRQAILVGSAIPLVMFLMWNAVILGSLDQSLAEA-------AAGAAAAGGETFDPLALLRNGASGPVVGNLISVFSVFAIVTSFIG 426
BLAST of mRNA_P-wetherbeei_contig13459.1.1 vs. uniprot
Match: W7TVH4_9STRA (Tyrosine-specific transport n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVH4_9STRA) HSP 1 Score: 101 bits (251), Expect = 3.580e-21 Identity = 81/209 (38.76%), Postives = 112/209 (53.59%), Query Frame = 1
Query: 34 NYLLLVAYISQGSNIVASVLGSEACGPFL------CVSQPA-LTPLLFGVVLGSARLFAPPAAANAANNALVVAIAASFAGLLAVGLPGVEVGVLTATFDVAAAPAMLPVALTATVFQNIVPVVLKQLKGDLQAVRAALTWGSGIPIGMYLLWDAVILGQRTAPAISIDG--GGAVGSAA----SGAVPALPLLVSVFSFAALVTSFWG 621
+Y LLVAYI+QG +I+ L E G L V PA + P+LF VLG A F ++AN+ALV + +F L+A P + G L A P++ PV A V+ NIVPV+ +L+GD +R ++ GSGIP+ M+L W+AVILG A ++ GG + A GA L L+S+FS A+VTSF G
Sbjct: 269 HYALLVAYIAQGGDILTGAL--EGAGAALGFGGGDAVVLPAQVAPVLFTAVLGGALAFGNKKWLDSANDALVGVVVVAFLALVAAAGPRADPGGLMRANWTAMLPSI-PVMFVALVYHNIVPVISYRLRGDADKIRTSIVVGSGIPLLMFLAWNAVILGNIDASILTATSASGGTIDPLAVLRAGGAGHTLGNLISLFSEVAIVTSFTG 474
BLAST of mRNA_P-wetherbeei_contig13459.1.1 vs. uniprot
Match: A0A1Y1HMD4_KLENI (Tryptophan or tyrosine transporter protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HMD4_KLENI) HSP 1 Score: 98.6 bits (244), Expect = 2.310e-20 Identity = 78/222 (35.14%), Postives = 111/222 (50.00%), Query Frame = 1
Query: 16 GMFVASNYLLLVAYISQGSNIVASVLGSEACGPFLCVSQPALTPLLFGVVLGSARLFAPPAAANAANNALVVAIAASFAGLLAVGLPGVE-VGVLTATFDVAAAPAMLPVALTATVFQNIVPVVLKQLKGDLQAVRAALTWGSGIPIGMYLLWDAVILGQRTAPAISIDGGGAVGSAASGAVPALPLL------------VSVFSFAALVTSFWGATASLSE 642
G ++ +Y LLVAY+++ +I+ + G L VS A T G+ F+ N L+ AI ASFA L+ + P VE +L A + A PA +P+ + V+QN+VPV+ +L+GDL +R A+ +G+ IP+ M+LLWDAVILG A AV AA PLL V +FSF A+ TSF G LS+
Sbjct: 179 GTYIFIHYALLVAYVARSGDIITNFTGLP-----LPVSAAAFT-----AAFGAITYFSSQKTLGYVNGFLIAAILASFATLVGIAAPEVEPASLLKANWS--AVPASIPIVALSFVYQNVVPVISSELEGDLPKIRTAIMYGTAIPLTMFLLWDAVILGSVPA---------AVPGAAQSMAAMDPLLRLRESSGAVGPAVEIFSFFAIGTSFIGFVLGLSD 379
BLAST of mRNA_P-wetherbeei_contig13459.1.1 vs. uniprot
Match: UPI001CB897CB (tyrosine-specific transport protein-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB897CB) HSP 1 Score: 97.4 bits (241), Expect = 5.940e-20 Identity = 70/210 (33.33%), Postives = 109/210 (51.90%), Query Frame = 1
Query: 13 CGMFVASNYLLLVAYISQGSNIVASVLGSEACGPFLCVSQPALTPLLFGVVLGSARLFAPPAAANAANNALVVAIAASFAGLLAVGLPGVEVGVLTATFDVAAAPAMLPVALTATVFQNIVPVVLKQLKGDLQAVRAALTWGSGIPIGMYLLWDAVILGQRTAPAISIDGGGAVGSAASGAVPALPLLVSVFSFAALVTSFWGATASLSE 642
C ++ +Y LLVAY+++ S+I+ ++LG + C S LF +LGS F A N LV +I SFA L+AV + L ++ A PA +P+ + V+QN+VPV+ L+GDL +R ++ G+ IP+G++L+W+AVILG T+P D A + +V FS A+ TS+ G LS+
Sbjct: 188 CWSYIFIHYALLVAYVARSSDILTNILGIPV---WECAS-------LFSFLLGSLCYFGSQQVIGAVNGVLVSSIIISFAALVAVASGDLHWDALLKV-NLQAIPASIPIIALSFVYQNVVPVLCTNLEGDLSKIRTSIVLGTAIPLGLFLIWNAVILGTITSPKTGTDKIVDPLQALLATNGVVGPIVGAFSLLAIATSYIGFVLGLSD 386 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13459.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13459.1.1 >prot_P-wetherbeei_contig13459.1.1 ID=prot_P-wetherbeei_contig13459.1.1|Name=mRNA_P-wetherbeei_contig13459.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=209bp MFVASNYLLLVAYISQGSNIVASVLGSEACGPFLCVSQPALTPLLFGVVLback to top mRNA from alignment at P-wetherbeei_contig13459:406..1833- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13459.1.1 ID=mRNA_P-wetherbeei_contig13459.1.1|Name=mRNA_P-wetherbeei_contig13459.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1428bp|location=Sequence derived from alignment at P-wetherbeei_contig13459:406..1833- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13459:406..1833- >mRNA_P-wetherbeei_contig13459.1.1 ID=mRNA_P-wetherbeei_contig13459.1.1|Name=mRNA_P-wetherbeei_contig13459.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=627bp|location=Sequence derived from alignment at P-wetherbeei_contig13459:406..1833- (Phaeothamnion wetherbeei SAG_119_79)back to top |