mRNA_P-wetherbeei_contig13456.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13456.2.1 vs. uniprot
Match: A0A840STK6_9RHOB (Uncharacterized protein n=1 Tax=Amaricoccus macauensis TaxID=57001 RepID=A0A840STK6_9RHOB) HSP 1 Score: 66.2 bits (160), Expect = 3.230e-11 Identity = 32/58 (55.17%), Postives = 37/58 (63.79%), Query Frame = 1
Query: 1 SIKDIMVFLGGLKLAHRPAIFLLDNGNFRALWRDENNKQQVGLQFLGNETVQYVIFVR 174
S K + FL + RP I LLDNGN RA W D+ +QVGLQFLG + VQYVIF R
Sbjct: 122 SEKGLKAFLAAIPFTKRPYITLLDNGNVRAFWEDKAAGEQVGLQFLGGDQVQYVIFAR 179
BLAST of mRNA_P-wetherbeei_contig13456.2.1 vs. uniprot
Match: A0A7X4FF90_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4FF90_9BACT) HSP 1 Score: 62.8 bits (151), Expect = 1.320e-10 Identity = 32/90 (35.56%), Postives = 48/90 (53.33%), Query Frame = 1
Query: 1 SIKDIMVFLGGLKLAHRPAIFLLDNGNFRALWRDENNKQQVGLQFLGNETVQYVIFVREGQTDKLKTIASTGSMRAMLPLIASASCSYLL 270
S D F+ + A + + LDNGN RA+W+DEN +GLQFLGN V+YVIF R T + +A ++ + I + + L+
Sbjct: 32 SEADFWSFIESISFAQKAGVVFLDNGNLRAVWKDENGSH-LGLQFLGNRLVEYVIFKRRQATKDILRVAGQDTIEGIKKKIRAFDLTALM 120
BLAST of mRNA_P-wetherbeei_contig13456.2.1 vs. uniprot
Match: A0A6L7N3G4_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7N3G4_9GAMM) HSP 1 Score: 61.2 bits (147), Expect = 8.010e-10 Identity = 32/91 (35.16%), Postives = 50/91 (54.95%), Query Frame = 1
Query: 1 SIKDIMVFLGGLKLAHRPAIFLLDNGNFRALWRDENNKQQVGLQFLGNETVQYVIFVREGQTDKLKTIASTGSMRAMLPLIASASCSYLLF 273
S D +F+G + + L+DNGN RA+W+D+ + VGLQFLG E VQYVIF R T + +A ++ + +I + +L+
Sbjct: 52 SEADFWLFVGLENRLRKGNLVLMDNGNLRAVWKDDQGSR-VGLQFLGEEMVQYVIFKRREFTKPISRVAGRDTLTGLRAIIKAFELDSMLY 141
BLAST of mRNA_P-wetherbeei_contig13456.2.1 vs. uniprot
Match: A0A6L7LD39_9CHLR (Uncharacterized protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6L7LD39_9CHLR) HSP 1 Score: 58.2 bits (139), Expect = 8.830e-9 Identity = 27/74 (36.49%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 1 SIKDIMVFLGGLKLAHRPAIFLLDNGNFRALWRDENNKQQVGLQFLGNETVQYVIFVREGQTDKLKTIASTGSM 222
S +D F+ L+ + A+FL+DNGN RA+W+ + +GLQFLG + +YVIF R+ ++ L +A ++
Sbjct: 35 SERDFWSFVHSAPLSEKAALFLMDNGNLRAVWKG-GDSSHIGLQFLGCQKAEYVIFKRQKGSEGLSRVAGVDTL 107
BLAST of mRNA_P-wetherbeei_contig13456.2.1 vs. uniprot
Match: UPI0018DFA7BC (hypothetical protein n=1 Tax=Sphingomonas sp. MA1305 TaxID=2479204 RepID=UPI0018DFA7BC) HSP 1 Score: 59.7 bits (143), Expect = 9.190e-9 Identity = 32/68 (47.06%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 1 SIKDIMVFLGGLKLAHRPAIFLLDNGNFRALWRDENNKQQVGLQFLGNETVQYVIFVREGQTDKLKTI 204
S ++ FL L+ RPAIF L NGN RA+W D+ +QVG+QFL + TVQYVI +R + L++I
Sbjct: 119 SSASLVQFLMDLRPTKRPAIFRLSNGNLRAVWEDKRADRQVGMQFLTDGTVQYVI-LRASKKGMLQSI 185
BLAST of mRNA_P-wetherbeei_contig13456.2.1 vs. uniprot
Match: UPI001C8DA222 (hypothetical protein n=1 Tax=Paracoccus yeei TaxID=147645 RepID=UPI001C8DA222) HSP 1 Score: 57.0 bits (136), Expect = 1.010e-7 Identity = 29/90 (32.22%), Postives = 49/90 (54.44%), Query Frame = 1
Query: 1 SIKDIMVFLGGLKLAHRPAIFLLDNGNFRALWRDENNKQQVGLQFLGNETVQYVIFVREGQTDKLKTIASTGSMRAMLPLIASASCSYLL 270
S +D F+ + + ++ L+DNGN RA+W+D+ Q +GLQ+LG +VQ+VIF + + +A S+ + I + S LL
Sbjct: 126 SKRDFWTFIRSMPFIRKGSLILMDNGNLRAVWKDDQGNQ-IGLQYLGTGSVQFVIFKHPDRAGGVSRVAGCTSLADIKRQIRAFSLERLL 214
BLAST of mRNA_P-wetherbeei_contig13456.2.1 vs. uniprot
Match: UPI001489D26A (hypothetical protein n=1 Tax=Ruegeria sp. HKCCD8929 TaxID=2683006 RepID=UPI001489D26A) HSP 1 Score: 56.2 bits (134), Expect = 1.710e-7 Identity = 28/73 (38.36%), Postives = 40/73 (54.79%), Query Frame = 1
Query: 1 SIKDIMVFLGGLKLAHRPAIFLLDNGNFRALWRDENNKQQVGLQFLGNETVQYVIFVREGQTDKLKTIASTGS 219
S D F+ + + L+DNGN RA+WRD++ + +GLQF+G VQYVIF R K+ +A S
Sbjct: 113 SKHDFWRFICSEPFIRKGNLILMDNGNLRAMWRDQH-RNHIGLQFIGGRMVQYVIFKRREAVAKISRVAGRDS 184
BLAST of mRNA_P-wetherbeei_contig13456.2.1 vs. uniprot
Match: A0A6B1CLZ3_9BACT (Uncharacterized protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6B1CLZ3_9BACT) HSP 1 Score: 54.3 bits (129), Expect = 2.640e-7 Identity = 24/74 (32.43%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 1 SIKDIMVFLGGLKLAHRPAIFLLDNGNFRALWRDENNKQQVGLQFLGNETVQYVIFVREGQTDKLKTIASTGSM 222
S +D ++ + A + + L+DNG+ RA+W+ ++ + +G+QFLGN+ V+YVIF R T + +A ++
Sbjct: 37 SERDFWHYIRSVPFAQKAGLVLVDNGDLRAVWKGDD-ESHLGIQFLGNQWVEYVIFKRRPSTSDVARVAGRDTL 109
BLAST of mRNA_P-wetherbeei_contig13456.2.1 vs. uniprot
Match: A0A7X3XX31_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3XX31_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 3.360e-7 Identity = 28/77 (36.36%), Postives = 44/77 (57.14%), Query Frame = 1
Query: 1 SIKDIMVFLGGLKLAHRPAIFLLDNGNFRALWRDENNKQQVGLQFLGNETVQYVIFVREGQTDKLKTIASTGSMRAM 231
S +D F+ + + LLDNGN RA+W+DE + +G+QFLG++ VQYVIF R + + +A S+ +
Sbjct: 114 SERDFKQFVRSRPSIRKGDLVLLDNGNLRAVWKDEQGGR-LGVQFLGSDVVQYVIFSRRQRNRPVSRVAGRDSLEGV 189
BLAST of mRNA_P-wetherbeei_contig13456.2.1 vs. uniprot
Match: A0A6B0YQW7_9CHLR (Uncharacterized protein n=2 Tax=unclassified Caldilineaceae TaxID=1919254 RepID=A0A6B0YQW7_9CHLR) HSP 1 Score: 55.1 bits (131), Expect = 4.570e-7 Identity = 26/73 (35.62%), Postives = 42/73 (57.53%), Query Frame = 1
Query: 1 SIKDIMVFLGGLKLAHRPAIFLLDNGNFRALWRDENNKQQVGLQFLGNETVQYVIFVREGQTDKLKTIASTGS 219
S+ D F+G ++ + + L++NGN RA+W+ E + +GL FLG + VQYVIF R + ++ A S
Sbjct: 112 SVDDFWSFIGSSNVSRQAGLALMENGNIRAVWKGEE-ESHLGLHFLGEQQVQYVIFKRRPGSRRISRTAGRDS 183 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13456.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13456.2.1 >prot_P-wetherbeei_contig13456.2.1 ID=prot_P-wetherbeei_contig13456.2.1|Name=mRNA_P-wetherbeei_contig13456.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=88bp MVFLGGLKLAHRPAIFLLDNGNFRALWRDENNKQQVGLQFLGNETVQYVIback to top mRNA from alignment at P-wetherbeei_contig13456:1560..1838- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13456.2.1 ID=mRNA_P-wetherbeei_contig13456.2.1|Name=mRNA_P-wetherbeei_contig13456.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=279bp|location=Sequence derived from alignment at P-wetherbeei_contig13456:1560..1838- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13456:1560..1838- >mRNA_P-wetherbeei_contig13456.2.1 ID=mRNA_P-wetherbeei_contig13456.2.1|Name=mRNA_P-wetherbeei_contig13456.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=264bp|location=Sequence derived from alignment at P-wetherbeei_contig13456:1560..1838- (Phaeothamnion wetherbeei SAG_119_79)back to top |