mRNA_P-wetherbeei_contig1340.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1340.6.1 vs. uniprot
Match: A0A835Z3G1_9STRA (JmjC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3G1_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 3.080e-13 Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 1 PAGFVFHMARCGSTVVANMLAASPENLVYAESAPVPAILKACDKNGCDDATRAALLRDVMLLMGRRS 201
PAGFV+HM RCGST+VANMLA+SP+++VY+E ++ C + C A+ L+DV+ LMGR S
Sbjct: 147 PAGFVYHMGRCGSTLVANMLASSPKHIVYSEPHATSDVMMGCRRVNCTPQELASTLKDVITLMGRTS 213
BLAST of mRNA_P-wetherbeei_contig1340.6.1 vs. uniprot
Match: A0A7S2K3H4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3H4_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 4.510e-13 Identity = 39/69 (56.52%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 1 PAGFVFHMARCGSTVVANMLAA-SPENL-VYAESAPVPAILKACDKNGCDDATRAALLRDVMLLMGRRS 201
P GFVFH +RCGST+VAN LAA +PE VY+ES P +KACD CD+ L+RDV+ LMGR S
Sbjct: 285 PNGFVFHESRCGSTLVANSLAAFAPEKTRVYSESGPPVLAMKACDFQSCDEGKHIELIRDVIYLMGRSS 353
BLAST of mRNA_P-wetherbeei_contig1340.6.1 vs. uniprot
Match: A0A7S2PC56_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PC56_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 4.580e-13 Identity = 38/67 (56.72%), Postives = 49/67 (73.13%), Query Frame = 1
Query: 1 PAGFVFHMARCGSTVVANMLAA-SPE-NLVYAESAPVPAILKACDKNGCDDATRAALLRDVMLLMGR 195
P GFVFH +RCGST+VAN+LAA +PE + VY ES P ++L AC + C+ +AAL RDV+ LMGR
Sbjct: 31 PTGFVFHESRCGSTLVANILAAFAPERSRVYTESPPPASVLTACRTSRCNPKKQAALFRDVLYLMGR 97
BLAST of mRNA_P-wetherbeei_contig1340.6.1 vs. uniprot
Match: A0A448Z5L2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z5L2_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.060e-12 Identity = 39/76 (51.32%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 1 PAGFVFHMARCGSTVVANMLAASPENL----VYAESAPVPAILKACDKNG---CDDATRAALLRDVMLLMGRRSPA 207
P+G VFH RCGST+VAN+LA S + VY+ES P A L+AC +NG CD ++L+RDV +MGRR PA
Sbjct: 238 PSGVVFHETRCGSTLVANLLAGSSPTMGTSRVYSESPPPIAALQACARNGGNACDPDLHSSLIRDVFYVMGRRRPA 313
BLAST of mRNA_P-wetherbeei_contig1340.6.1 vs. uniprot
Match: A0A7S3ZKE9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKE9_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.260e-11 Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 1 PAGFVFHMARCGSTVVANMLAASPENLVYAESAPVPAILKACDKNGCDDATRAALLRDVMLLMG 192
P+GFVFH +R GST+VANMLAA P N+VY+ESAP PA+L C C + +L+ ++ LMG
Sbjct: 178 PSGFVFHESRVGSTLVANMLAAVPTNIVYSESAPPPAVLNHC--RSCSKQRKTDILQKLIALMG 239
BLAST of mRNA_P-wetherbeei_contig1340.6.1 vs. uniprot
Match: A0A7S4EIA1_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EIA1_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 3.280e-11 Identity = 38/72 (52.78%), Postives = 45/72 (62.50%), Query Frame = 1
Query: 1 PAGFVFHMARCGSTVVANMLAASP---ENLVYAESAPVPAILKACDKNG---CDDATRAALLRDVMLLMGRR 198
P G VFH RCGST+VAN+LA S + VY+ES P A LKAC +G CD AL+RDV +MGRR
Sbjct: 219 PTGVVFHETRCGSTLVANLLAGSATEGRSRVYSESPPPIAALKACSNDGDKSCDPDLHKALIRDVFYMMGRR 290
BLAST of mRNA_P-wetherbeei_contig1340.6.1 vs. uniprot
Match: A0A4D9CT70_9STRA (JmjC domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT70_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 6.200e-11 Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 1
Query: 1 PAGFVFHMARCGSTVVANMLAASPENLVYAESAPVPAILKACDKNGCDDATRAALLRDVMLLMGR 195
P GF+FH +R GST+VANMLA+ P NLVY+E + ++ C GC + T LLR +L MGR
Sbjct: 213 PTGFIFHESRVGSTLVANMLASVPTNLVYSEPSVPAHVIHLCKSAGCSEETTVRLLRMAILAMGR 277
BLAST of mRNA_P-wetherbeei_contig1340.6.1 vs. uniprot
Match: A0A7S2PP86_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PP86_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 7.290e-11 Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 1 PAGFVFHMARCGSTVVANMLAA-SPE-NLVYAESAPVPAILKACDKNGCDDATRAALLRDVMLLMGR 195
P GFVFH +RCGST+VAN LAA +PE + VY ES P ++L AC C+ +A L DV+ LMGR
Sbjct: 189 PTGFVFHESRCGSTLVANSLAAFAPERSRVYTESTPPSSVLVACPSGQCNKGKQADLFSDVLYLMGR 255
BLAST of mRNA_P-wetherbeei_contig1340.6.1 vs. uniprot
Match: A0A831YG16_9PROT (Aspartyl beta-hydroxylase n=1 Tax=Caulobacterales bacterium TaxID=2282150 RepID=A0A831YG16_9PROT) HSP 1 Score: 65.1 bits (157), Expect = 1.090e-10 Identity = 32/65 (49.23%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 1 PAGFVFHMARCGSTVVANMLAASPENLVYAESAPVPAILKACDKNGCDDATRAALLRDVMLLMGR 195
PAG +FHM+RCGST+ A MLAASP N+V +E+AP+ A+ + D DD +A LLR ++ +G+
Sbjct: 149 PAGLIFHMSRCGSTLAAQMLAASPANVVLSEAAPINAVTRRTD---LDDDAKACLLRAMVAALGQ 210
BLAST of mRNA_P-wetherbeei_contig1340.6.1 vs. uniprot
Match: A9USN8_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9USN8_MONBE) HSP 1 Score: 64.7 bits (156), Expect = 1.580e-10 Identity = 36/64 (56.25%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 1 PAGFVFHMARCGSTVVANMLAASPENLVYAESAPVPAILKACDKNGCDDATRAALLRDVMLLMG 192
P GFVFH +R GST+V+NMLAA P NLVYAESAP I CD C A + LLR + MG
Sbjct: 130 PTGFVFHQSRVGSTLVSNMLAADPANLVYAESAPPATIALHCD--ACTRARQIELLRLTVTAMG 191 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1340.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1340.6.1 >prot_P-wetherbeei_contig1340.6.1 ID=prot_P-wetherbeei_contig1340.6.1|Name=mRNA_P-wetherbeei_contig1340.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=62bp MARCGSTVVANMLAASPENLVYAESAPVPAILKACDKNGCDDATRAALLRback to top mRNA from alignment at P-wetherbeei_contig1340:7071..7277+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1340.6.1 ID=mRNA_P-wetherbeei_contig1340.6.1|Name=mRNA_P-wetherbeei_contig1340.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=207bp|location=Sequence derived from alignment at P-wetherbeei_contig1340:7071..7277+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1340:7071..7277+ >mRNA_P-wetherbeei_contig1340.6.1 ID=mRNA_P-wetherbeei_contig1340.6.1|Name=mRNA_P-wetherbeei_contig1340.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=186bp|location=Sequence derived from alignment at P-wetherbeei_contig1340:7071..7277+ (Phaeothamnion wetherbeei SAG_119_79)back to top |