mRNA_P-wetherbeei_contig13323.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13323.2.1 vs. uniprot
Match: A0A836C9F9_9STRA (Magnesium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F9_9STRA) HSP 1 Score: 117 bits (292), Expect = 6.550e-28 Identity = 65/119 (54.62%), Postives = 79/119 (66.39%), Query Frame = 1
Query: 61 PFELVVLEHFLQEVCTAYQRRVHIFSR-VATTVLSEVTQQTTLGS-RADFYKLVPIRAALKEFELSTLALRGCLADLLGSDEDLLALLLTERRRLRAGEHMDPRRHEAAELLLENYHRQ 411
PFEL +LE LQE C + QRR+ + VA T+ T TTLG+ R DFYK+VPI ALK FELST R CL DLL +D+D+L L+LT + L GE +D RH+ ELLLENYHRQ
Sbjct: 186 PFELAMLEAMLQEYCNSQQRRLRLMRHLVADTLTRATTSSTTLGNARIDFYKMVPINVALKNFELSTAEARRCLTDLLHNDDDMLDLMLTAKHELGPGEMLDETRHQEVELLLENYHRQ 304
BLAST of mRNA_P-wetherbeei_contig13323.2.1 vs. uniprot
Match: A0A6S8XKU5_9STRA (Magnesium transporter n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8XKU5_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 4.140e-20 Identity = 55/125 (44.00%), Postives = 80/125 (64.00%), Query Frame = 1
Query: 55 ETPFELVVLEHFLQEVCTAYQRRVHIFSRVATTVLSEVTQQTTLGSRADFYKLVPIRAALKEFELSTLALRGCLADLLGSDEDLLALLLTERRRLR-AGEHMDPRRHEAAELLLENYHRQARLLL 426
E FEL+ LE L++V T Y RR+ ++ + TV+++V+ + + S ++LVP++ +L EFE+ + CL LLG++ED+L LLLTER+ R GE MD RRHE ELLLE Y RQ +L
Sbjct: 272 EGAFELIFLEEILKDVVTTYNRRLILYEPIVDTVVTKVSNEMSAASGV--HRLVPVKDSLLEFEIQVESALNCLTHLLGNEEDMLGLLLTERQAARDRGEEMDIRRHEDVELLLEEYARQLSYIL 394
BLAST of mRNA_P-wetherbeei_contig13323.2.1 vs. uniprot
Match: A0A7S4HRH7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HRH7_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 7.090e-19 Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = 1
Query: 61 PFELVVLEHFLQEVCTAYQRRVHIFSRVATTVLSEVTQQTTLGSRADFYKLVPIRAALKEFELSTLALRGCLADLLGSDEDLLALLLTERRRLRA-GEHMDPRRHEAAELLLENYHRQ 411
PFELV +E L++ C + RR+ ++ + T +S T + + S A KLVPI+ +L++FEL+ CL LLG+DED+L LLLTE+ + + GEH+ HEA ELL E Y RQ
Sbjct: 52 PFELVFIEEVLRDACDTFNRRLRVYEPIVDTFMSRTTNE--VFSDAGVQKLVPIKDSLQDFELTVKQCLECLTHLLGNDEDMLGLLLTEKAKASSKGEHLRHEMHEAVELLFEEYARQ 167
BLAST of mRNA_P-wetherbeei_contig13323.2.1 vs. uniprot
Match: A0A8J2SNL6_9STRA (Magnesium transporter n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNL6_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 2.420e-12 Identity = 49/116 (42.24%), Postives = 63/116 (54.31%), Query Frame = 1
Query: 64 FELVVLEHFLQEVCTAYQRRVHIFSRVATTVLSEVTQQTTLGSRADFYKLVPIRAALKEFELSTLALRGCLADLLGSDEDLLALLLTERRRLRAGEHMDPRRHEAAELLLENYHRQ 411
FEL VLE L EV +++QRR ++ V L E + + ++L AL FE T L +LL SDED+L LLL+ERR AG +DP RH ELLLE YHR+
Sbjct: 133 FELAVLEAVLAEVSSSFQRRRDLYEPVVQKQLREASCEFDGFGVDGLHRLSAFDGALMSFEAETRQALQVLDELLASDEDMLGLLLSERR---AGTSVDPERHGVVELLLEAYHRR 245
BLAST of mRNA_P-wetherbeei_contig13323.2.1 vs. uniprot
Match: A0A813IX34_POLGL (Magnesium transporter (Fragment) n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IX34_POLGL) HSP 1 Score: 72.4 bits (176), Expect = 4.660e-12 Identity = 43/122 (35.25%), Postives = 73/122 (59.84%), Query Frame = 1
Query: 61 PFELVVLEHFLQEVCTAYQRRVHIFSRVATTVLSEVTQQTTLGSRADFYKLVPIRAALKEFELSTLALRGCLADLLGSDEDLLALLLTERRRLRAGEHMDPRRHEAAELLLENYHRQARLLL 426
PFEL+VLE L+++C +++RR ++ +A ++L+ ++ + ++V ++ AL +FEL+ + L +LL SDED++ L+++ R P +HE ELLLENYHRQ L L
Sbjct: 208 PFELMVLEEALRDICESFRRRAGLYRPLAESLLNGLS---VASAEQGLQRVVVLKDALGDFELAVKDMVALLKELLDSDEDMVGLVVSHGR--------TPSQHEDVELLLENYHRQLTLTL 318
BLAST of mRNA_P-wetherbeei_contig13323.2.1 vs. uniprot
Match: A0A7S2WFL9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WFL9_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.420e-10 Identity = 35/106 (33.02%), Postives = 64/106 (60.38%), Query Frame = 1
Query: 61 PFELVVLEHFLQEVCTAYQRRVHIFSRVATTVLSEVTQQTTLGSRADFYKLVPIRAALKEFELSTLALRGCLADLLGSDEDLLALLLTER-------RRLRAGEHM 357
PFELV +E L++ C + R+ ++ + + L++++ + ++ +LVPI+ +L+EFE+ CL ++LG++EDLL LL+TE+ R+L G+HM
Sbjct: 11 PFELVFVEEILRDACNTFDLRLKVYEPIVDSSLNQIS----VAEDSEANRLVPIKDSLQEFEIQVKQSLKCLTNMLGNEEDLLNLLITEKAEAQQKGRKLDFGKHM 112
BLAST of mRNA_P-wetherbeei_contig13323.2.1 vs. uniprot
Match: A0A7S3LGS3_9STRA (Magnesium transporter n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LGS3_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.480e-10 Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 1
Query: 61 PFELVVLEHFLQEVCTAYQRRVHIFSRVATTVLSEVTQQTTLGSRADFYKLVPIRAALKEFELSTLALRGCLADLLGSDEDLLALLLTERRRLRAGEHMDPRRHEAAELLLENY 402
PFE LE L VC Y R + + + VL E++ + + +KL+P++ + FE+ T +R CL ++L +DED++ +LL+E+++ G RHE ELLLENY
Sbjct: 277 PFECKALEGILSHVCRHYYNRTELITPLVENVLDELSAKKV--NPETLHKLLPMKDFISLFEIETTLMRNCLNEVLQNDEDMVNMLLSEKKK-HFGTPPPIERHEEVELLLENY 387
BLAST of mRNA_P-wetherbeei_contig13323.2.1 vs. uniprot
Match: A0A7J7IGR2_9RHOD (Magnesium transporter n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IGR2_9RHOD) HSP 1 Score: 58.2 bits (139), Expect = 4.520e-7 Identity = 41/116 (35.34%), Postives = 61/116 (52.59%), Query Frame = 1
Query: 55 ETPFELVVLEHFLQEVCTAYQRRVHIFSRVATTVLSEVTQQTTLGSRADFYKLVPIRAALKEFELSTLALRGCLADLLGSDEDLLALLLTERRRLRAGEHMDPRRHEAAELLLENY 402
E PFEL LE L EVC A +R + +L+E+T++ +G R +++ ++ L F + +R L DLLG DED+ + LTE ++ E P HE E LLE+Y
Sbjct: 374 EAPFELHALESILIEVCVALERDLACIEPSLMRLLNEITRK--IGGRK-LEEMLYLKQMLSNFSVRVDGVRDALQDLLGEDEDMARMYLTEMKKHPETER-PPTAHEQVEELLESY 485
BLAST of mRNA_P-wetherbeei_contig13323.2.1 vs. uniprot
Match: W7TUB2_9STRA (Mitochondrial rna splicing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUB2_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 6.120e-7 Identity = 39/124 (31.45%), Postives = 58/124 (46.77%), Query Frame = 1
Query: 64 FELVVLEHFLQEVCTAYQRRVHIFSRVATTVLSEVTQQTTLGSRADFYKLVPIRAALKEFELSTLALRGCLADLLGSDEDLLALLLTERRRLRAGE--------HMDPRRHEAAELLLENYHRQ 411
+ELVVLE L+ C + R + + T L + Y+LVP++ L + + G L L+ DED+LA+LLTE+ L+ + +D H ELLLENY R+
Sbjct: 215 YELVVLEQALRSFCNQFSRIKELLGLIVETSLKALVDSQGSDQEEQLYRLVPLKDGLSVAQHNMQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRE 338
BLAST of mRNA_P-wetherbeei_contig13323.2.1 vs. uniprot
Match: A0A1U7LTH9_NEOID (Magnesium transporter n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LTH9_NEOID) HSP 1 Score: 53.9 bits (128), Expect = 1.240e-5 Identity = 39/117 (33.33%), Postives = 61/117 (52.14%), Query Frame = 1
Query: 61 PFELVVLEHFLQEVCTAYQRRVHIFSRVATTVLSEVTQQTTLGSRADFYKLVPIRAALKEFELSTLALRGCLADLLGSDEDLLALLLTERRRLRAGEHMDPRRHEAAELLLENYHRQ 411
P+EL +E L V TA + I + TT+LS++ + R + +L+ L FE +R L ++L SDEDL+ + L+E+RR G+ +H+ ELLLE Y +Q
Sbjct: 191 PYELRAVEAVLISVTTALNAEMKILQSLVTTLLSDLEEHI---DRDNLRRLLVYSKNLSAFEKKATLVRDTLDEILESDEDLVGMYLSEKRR---GKERSLDQHDEVELLLEAYLQQ 301 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13323.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13323.2.1 >prot_P-wetherbeei_contig13323.2.1 ID=prot_P-wetherbeei_contig13323.2.1|Name=mRNA_P-wetherbeei_contig13323.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp MLDEERRQSELLRLAQEPETPFELVVLEHFLQEVCTAYQRRVHIFSRVATback to top mRNA from alignment at P-wetherbeei_contig13323:745..1725- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13323.2.1 ID=mRNA_P-wetherbeei_contig13323.2.1|Name=mRNA_P-wetherbeei_contig13323.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=981bp|location=Sequence derived from alignment at P-wetherbeei_contig13323:745..1725- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13323:745..1725- >mRNA_P-wetherbeei_contig13323.2.1 ID=mRNA_P-wetherbeei_contig13323.2.1|Name=mRNA_P-wetherbeei_contig13323.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig13323:745..1725- (Phaeothamnion wetherbeei SAG_119_79)back to top |