mRNA_P-wetherbeei_contig13316.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13316.1.1 vs. uniprot
Match: A0A6H5JQU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU5_9PHAE) HSP 1 Score: 264 bits (675), Expect = 1.550e-85 Identity = 127/217 (58.53%), Postives = 166/217 (76.50%), Query Frame = 1
Query: 1 MQRDGLSGVEISRSEKAYISQGVELGIRGDGRGRLDYRGIMVDADGLAQANGSSRISVAHGATDVLAAIKVEVGTPSPSAPAEGRIEVSVECSNSLFPRFDERASGDLDALLSQLLGGVIAESRALRLGELCIVPGKWCWVVYVDVLILQANGGLLDAASFAAYVALNTARVPRVTLVTGESGLGDDFELSGDVADAAPIAGAKNAPICISLSKVGG 651
M R L+G+ S SE+ Y++ GVELG+RGDGRGRLDYR + V A LAQ+NGS+R+++AH TDVLAA+KVEVG P AP GR+EV + CSNSLFP+FDER+SGD++A+LS L + L L L IV GK+CWVV+VD+L+LQA+G LLDA+SFAAY ALNTAR+P+VT + GE G+ DDFE+S ++ DA I GA N P+C+++S+VGG
Sbjct: 1 MSRSTLTGLNTSSSEREYVALGVELGMRGDGRGRLDYRSLSVQAGVLAQSNGSARVTIAHNGTDVLAAVKVEVGEPGLEAPGAGRVEVCISCSNSLFPKFDERSSGDVNAVLSGALERSMRGVGGLDLDALGIVDGKFCWVVFVDILVLQADGNLLDASSFAAYTALNTARIPKVTPLVGEGGIYDDFEISSNIDDAVAIKGATNVPVCLTMSRVGG 217
BLAST of mRNA_P-wetherbeei_contig13316.1.1 vs. uniprot
Match: D7FYR5_ECTSI (RNase_PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR5_ECTSI) HSP 1 Score: 260 bits (664), Expect = 9.300e-85 Identity = 126/216 (58.33%), Postives = 164/216 (75.93%), Query Frame = 1
Query: 1 MQRDGLSGVEISRSEKAYISQGVELGIRGDGRGRLDYRGIMVDADGLAQANGSSRISVAHGATDVLAAIKVEVGTPSPSAPAEGRIEVSVECSNSLFPRFDERASGDLDALLSQLLGGVIAESRALRLGELCIVPGKWCWVVYVDVLILQANGGLLDAASFAAYVALNTARVPRVTLVTGESGLGDDFELSGDVADAAPIAGAKNAPICISLSKVG 648
M R L+G+ S SE+ Y++ GVELG+RGDGRGRLDYR + V A LAQ+NGS+R+++AH TDVLAA+KVEVG P AP GR+EV V CSNSLFP+FDER+SGD++A+LS L + L L L IV GK+CWVV+VD+L+LQA+G LLDA+SFAAY ALNTAR+P+VT + GE G+ DDFE+S ++ DA I GA N P+C+++S+ G
Sbjct: 1 MSRSTLTGLNTSSSEREYVALGVELGMRGDGRGRLDYRSLSVQAGVLAQSNGSARVTIAHNGTDVLAAVKVEVGEPGLEAPGAGRVEVCVSCSNSLFPKFDERSSGDVNAVLSGALERSMQGVGGLDLDALGIVDGKFCWVVFVDILVLQADGNLLDASSFAAYTALNTARIPKVTPLVGEGGIYDDFEISSEIDDAVAIKGATNVPVCLTMSRNG 216
BLAST of mRNA_P-wetherbeei_contig13316.1.1 vs. uniprot
Match: A0A7S2Y3L9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3L9_9STRA) HSP 1 Score: 231 bits (590), Expect = 6.790e-73 Identity = 116/207 (56.04%), Postives = 151/207 (72.95%), Query Frame = 1
Query: 31 ISRSEKAYISQGVELGIRGDGRGRLDYRGIMVDADGLAQANGSSRISVAHGATDVLAAIKVEVGTPSPSAPAEGRIEVSVECSNSLFPRFDERASGDLDALLSQLLGGVIAESRALRLGELCIVPGKWCWVVYVDVLILQANGGLLDAASFAAYVALNTARVPRVTLVTGESGLG-DDFELSGDVADAAPIAGAKNAPICISLSKVG 648
IS SEK YI GVE G+R DGRG +D+R + V+ QANGS R+ + HGAT V+A +K EVG PSPS P EGR+ V VE S S+FP+FD+R + DL A + L VI +S + LCI+PG++CWVVYVD+L+L+A+G +LDA SFAAY ALNTARVP++T+V GE+G DDFELS DVAD+ P+ A++ P+CI+LS VG
Sbjct: 6 ISSSEKQYIILGVEQGVRCDGRGCMDFRPMEVETGVFPQANGSVRVKIDHGATSVIAVVKCEVGEPSPSRPREGRVVVGVEISGSMFPKFDDRHAADLQAEATGALARVIQDSSTMDTHSLCIIPGRFCWVVYVDILVLRADGNVLDATSFAAYAALNTARVPKLTVVPGEAGASEDDFELSSDVADSVPLL-AQDVPVCITLSLVG 211
BLAST of mRNA_P-wetherbeei_contig13316.1.1 vs. uniprot
Match: A0A7S3XUS1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUS1_HETAK) HSP 1 Score: 229 bits (585), Expect = 1.030e-72 Identity = 113/209 (54.07%), Postives = 149/209 (71.29%), Query Frame = 1
Query: 22 GVEISRSEKAYISQGVELGIRGDGRGRLDYRGIMVDADGLAQANGSSRISVAHGATDVLAAIKVEVGTPSPSAPAEGRIEVSVECSNSLFPRFDERASGDLDALLSQLLGGVIAESRALRLGELCIVPGKWCWVVYVDVLILQANGGLLDAASFAAYVALNTARVPRVTLVTGESGLGDDFELSGDVADAAPIAGAKNAPICISLSKVG 648
G SRSEK YI GVE GIR DGRGRLDYR + ++ + L QANGS+R++++HGAT V+AA KVEVG P P P EGR+ V E SN+LFPR D+RA+ + +A L+ L +I S L L +LCI+PGK+CWV+++DVLIL +NG +LD AS AAYV LNT R+P+ T+ E G G DF++S D ADA + GA P+ ++L+KVG
Sbjct: 5 GGATSRSEKEYILLGVEQGIRTDGRGRLDYRPVAIETNILPQANGSARVTISHGATTVIAASKVEVGKPDPRRPREGRVSVGAEVSNALFPRADDRANLEANAELASALTRIIVNSDTLDLEQLCIIPGKFCWVIHLDVLILSSNGNILDPASMAAYVTLNTTRIPKTTVFELEGGGGQDFDISSDFADAELVPGADLLPVAVTLAKVG 213
BLAST of mRNA_P-wetherbeei_contig13316.1.1 vs. uniprot
Match: A0A835YWB1_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWB1_9STRA) HSP 1 Score: 224 bits (570), Expect = 5.480e-71 Identity = 110/187 (58.82%), Postives = 141/187 (75.40%), Query Frame = 1
Query: 88 DGRGRLDYRGIMVDADGLAQANGSSRISVAHGATDVLAAIKVEVGTPSPSAPAEGRIEVSVECSNSLFPRFDERASGDLDALLSQLLGGVIAESRALRLGELCIVPGKWCWVVYVDVLILQANGGLLDAASFAAYVALNTARVPRVTLVTGE-SGLGDDFELSGDVADAAPIAGAKNAPICISLSKV 645
DGRG LDYR I V + L QANGS+RI++AHG T+VLAA+K+E G PS AP EGR+EV VECSNSLFP FD+R+ GD++A LS +L + ES AL L LCI+PG++CW+VY+DVL+LQA+G LLDAASFAAYVA NTA VPR T+++GE +G+ DDFE+ GD+ A + GA + L +V
Sbjct: 9 DGRGWLDYRSISVQGEVLPQANGSARITIAHGGTEVLAAVKIETGVPSADAPHEGRVEVCVECSNSLFPTFDDRSGGDVNAALSLMLARTVVESGALDLKSLCIIPGRFCWIVYLDVLVLQADGNLLDAASFAAYVAFNTALVPRTTVISGEGAGVEDDFEIDGDLNTATRLPGADKVHEQLHLDQV 195
BLAST of mRNA_P-wetherbeei_contig13316.1.1 vs. uniprot
Match: A0A7S1GE40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GE40_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.600e-55 Identity = 93/205 (45.37%), Postives = 137/205 (66.83%), Query Frame = 1
Query: 37 RSEKAYISQGVELGIRGDGRGRLDYRGIMVDADGLAQANGSSRISVAHGATDVLAAIKVEVGTPSPSAPAEGRIEVSVECSNSLFPRFDERASGDLDALLSQLLGGVIAESRALRLGELCIVPGKWCWVVYVDVLILQANGGLLDAASFAAYVALNTARVPRVTLVTGESGLGDDFELSGDVADAAPIAGAKNAPICISLSKVGG 651
++E+A++ GV+ G+RGDGRGRLDYR + VDA LAQANGS+R+++ + ATDVL A+K E+ PSP AP GR+E SV C +S P+F+ R + ++A L+ L + S A+ L LC++PG+ CWV+YVDV++L + G + DA S AA+ AL R+PR+ +V GE+ D E+ D A AA G + P+ I+ ++GG
Sbjct: 1 KAERAFVQAGVDAGVRGDGRGRLDYRFVSVDAGLLAQANGSARVTLVNAATDVLGAVKAELAEPSPDAPDAGRVECSVACWSSASPQFEGRGADAINAQLTAALERTLGSSGAIDLKSLCVIPGRMCWVLYVDVIVLDSGGSIDDAVSLAAHAALRDTRLPRLYVVPGETEEEADVEVEEDPA-AAVALGVEALPVTITFFQLGG 204
BLAST of mRNA_P-wetherbeei_contig13316.1.1 vs. uniprot
Match: A0A3B1J5J7_ASTMX (Exosome component 7 n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1J5J7_ASTMX) HSP 1 Score: 163 bits (412), Expect = 5.480e-46 Identity = 88/211 (41.71%), Postives = 124/211 (58.77%), Query Frame = 1
Query: 16 LSGVEISRSEKAYISQGVELGIRGDGRGRLDYRGIMVDADGLAQANGSSRISVAHGATDVLAAIKVEVGTPSPSAPAEGRIEVSVECSNSLFPRFDERASGDLDALLSQLLGGVIAESRALRLGELCIVPGKWCWVVYVDVLILQANGGLLDAASFAAYVALNTARVPRVTLVTGESGLGDDFELSGDVADAAPIAGAKNAPICISLSKVG 648
++ V++S +EK YI GV +R DGRG DYR + V+ D ++ +GS+++S+ H TDVL IK E+G P P+ P EG +E V+CS + P F+ R +L LS L V +L L LCI PG+ CWV+Y+DVL+LQ +G L DA S A AL R+P+V + E G G + ELS D D + N P ++LSK+G
Sbjct: 1 MATVQVSEAEKVYIMHGVRDDLRVDGRGCEDYRHMEVETDVVSNTDGSAKVSLGH--TDVLVGIKAEIGKPKPAVPNEGYVEFFVDCSANATPEFEGRGGEELGVELSNTLYKVFNNRHSLDLRSLCICPGEHCWVLYIDVLLLQCDGNLFDAMSVAIKAALFNTRIPKVQVSEDEEG-GKEIELSDDPYDCMRLD-VTNVPCIVTLSKIG 207
BLAST of mRNA_P-wetherbeei_contig13316.1.1 vs. uniprot
Match: A0A3B3SY60_9TELE (Exosome component 7 n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SY60_9TELE) HSP 1 Score: 162 bits (411), Expect = 7.530e-46 Identity = 87/211 (41.23%), Postives = 125/211 (59.24%), Query Frame = 1
Query: 16 LSGVEISRSEKAYISQGVELGIRGDGRGRLDYRGIMVDADGLAQANGSSRISVAHGATDVLAAIKVEVGTPSPSAPAEGRIEVSVECSNSLFPRFDERASGDLDALLSQLLGGVIAESRALRLGELCIVPGKWCWVVYVDVLILQANGGLLDAASFAAYVALNTARVPRVTLVTGESGLGDDFELSGDVADAAPIAGAKNAPICISLSKVG 648
++ V++ +EK YI GV +R DGRG DYR + ++ D ++ +GS+R+ + + TDVL IK E+G P P+AP EG +E V+CS + P F+ R +L + LS L V +L L LCI P + CWV+YVDVL+LQ +G L DA S A AL R+P+VT+ GE G G + ELS D D + +N P ++L K+G
Sbjct: 1 MAAVQVCEAEKVYIMHGVRDDLRVDGRGCEDYRHMEIETDVVSNTDGSARVKLGY--TDVLVGIKAEIGKPKPAAPDEGYLEFFVDCSANATPEFEGRGGEELGSELSCTLYKVFNNVNSLELRALCIAPREHCWVLYVDVLLLQCDGNLFDAISIAIKAALFNTRIPKVTITEGEEG-GAELELSDDPYDCVRL-NVENVPCIVTLCKIG 207
BLAST of mRNA_P-wetherbeei_contig13316.1.1 vs. uniprot
Match: A0A4Y7NLX5_9CRUS (EOG090X0CWA n=1 Tax=Moina brachiata TaxID=675436 RepID=A0A4Y7NLX5_9CRUS) HSP 1 Score: 161 bits (408), Expect = 2.060e-45 Identity = 86/211 (40.76%), Postives = 127/211 (60.19%), Query Frame = 1
Query: 16 LSGVEISRSEKAYISQGVELGIRGDGRGRLDYRGIMVDADGLAQANGSSRISVAHGATDVLAAIKVEVGTPSPSAPAEGRIEVSVECSNSLFPRFDERASGDLDALLSQLLGGVIAESRALRLGELCIVPGKWCWVVYVDVLILQANGGLLDAASFAAYVALNTARVPRVTLVTGESGLGDDFELSGDVADAAPIAGAKNAPICISLSKVG 648
++ V IS +EKA+I GV+ +R DGR RLDYR I ++ ++ A+GS+R+ +A+ +D+L IKVE+ PSP P+EGRIE V+CS + P F+ R DL +SQ L A L L ELC++PG CW++Y+D+LIL+ G L DA S A AL ++P V + + + + ELS D D + +NAP ++L K+G
Sbjct: 1 MAEVLISEAEKAFIHHGVQDDLRCDGRSRLDYRPIYLETGIVSNASGSARLRLAN--SDILVGIKVELAAPSPDKPSEGRIEFFVDCSANATPEFEGRGGEDLANQISQFLQRAYASIDTLNLSELCVIPGLQCWILYIDILILECGGNLFDAVSLAVKSALYATQIPSVKVAAIDGDV-PELELSDDPYDTKSL-NVQNAPSAVTLMKIG 207
BLAST of mRNA_P-wetherbeei_contig13316.1.1 vs. uniprot
Match: J9KAN7_ACYPI (Uncharacterized protein n=11 Tax=Aphididae TaxID=27482 RepID=J9KAN7_ACYPI) HSP 1 Score: 159 bits (402), Expect = 1.590e-44 Identity = 88/211 (41.71%), Postives = 127/211 (60.19%), Query Frame = 1
Query: 16 LSGVEISRSEKAYISQGVELGIRGDGRGRLDYRGIMVDADGLAQANGSSRISVAHGATDVLAAIKVEVGTPSPSAPAEGRIEVSVECSNSLFPRFDERASGDLDALLSQLLGGVIAESRALRLGELCIVPGKWCWVVYVDVLILQANGGLLDAASFAAYVALNTARVPRVTLVTGESGLGDDFELSGDVADAAPIAGAKNAPICISLSKVG 648
+S V ++ +EK YI GVE R DGR R DYR + ++ D ++ ANGS+R+ +A+ +D+L +KVE+ TP P AP +G+IE V+CS + P F+ R L A LS+ L +A L +LCIVPG+ CW ++VDVLIL+ G L DA S AA AL +P + + T E G D ++S D D P+ A + P+ +SL K+G
Sbjct: 1 MSLVSLNEAEKVYIIHGVEENFRCDGRSRQDYRPLELEMDIVSNANGSARLRLAN--SDILVCVKVEIDTPLPEAPKDGKIEYFVDCSANATPAFEGRGGEHLAAELSRFL--CLAHGPVFNLSKLCIVPGQSCWKLFVDVLILECGGNLFDAVSLAAKAALCNTSLPNI-VGTYEDGQNIDLQISDDPFDTKPLE-ASDLPVLVSLCKIG 205 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13316.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13316.1.1 >prot_P-wetherbeei_contig13316.1.1 ID=prot_P-wetherbeei_contig13316.1.1|Name=mRNA_P-wetherbeei_contig13316.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=219bp MQRDGLSGVEISRSEKAYISQGVELGIRGDGRGRLDYRGIMVDADGLAQAback to top mRNA from alignment at P-wetherbeei_contig13316:17..1402+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13316.1.1 ID=mRNA_P-wetherbeei_contig13316.1.1|Name=mRNA_P-wetherbeei_contig13316.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1386bp|location=Sequence derived from alignment at P-wetherbeei_contig13316:17..1402+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13316:17..1402+ >mRNA_P-wetherbeei_contig13316.1.1 ID=mRNA_P-wetherbeei_contig13316.1.1|Name=mRNA_P-wetherbeei_contig13316.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=657bp|location=Sequence derived from alignment at P-wetherbeei_contig13316:17..1402+ (Phaeothamnion wetherbeei SAG_119_79)back to top |