mRNA_P-wetherbeei_contig13263.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13263.1.1 vs. uniprot
Match: A0A345ZQK5_9HYPH (PilZ domain-containing protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZQK5_9HYPH) HSP 1 Score: 110 bits (274), Expect = 1.630e-29 Identity = 55/95 (57.89%), Postives = 67/95 (70.53%), Query Frame = 1 Query: 1 MQRDKRRSRRRPMRYHAVLVLDGDAQRGCILSDISDTGARIDVDTADELPNRFVLLLSGNGSPQRHCRVVWRQPTQVGVNFDGRLPADERTGLVP 285 M++D+R+S RR +RY A L L RGC LSDIS+TGARIDV+ + LPN F L L+ NGS +R+CRVVWR P QVGV F GRL + ER L P Sbjct: 1 MRKDQRKSPRRSVRYAAWLALAPGELRGCALSDISNTGARIDVENSATLPNEFALWLASNGSARRNCRVVWRTPKQVGVRFAGRLASGERAALAP 95
BLAST of mRNA_P-wetherbeei_contig13263.1.1 vs. uniprot
Match: A0A1Q4DFF8_9HYPH (PilZ domain-containing protein n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DFF8_9HYPH) HSP 1 Score: 94.0 bits (232), Expect = 8.940e-23 Identity = 41/84 (48.81%), Postives = 63/84 (75.00%), Query Frame = 1 Query: 1 MQRDKRRSRRRPMRYHAVLVLDGDAQRGCILSDISDTGARIDVDTADELPNRFVLLLSGNGSPQRHCRVVWRQPTQVGVNFDGR 252 M+ DKR+S R+P+RY A + LD + + C+LSD+SD+GAR++VD + +P +FVLLL+ +P+R+C VVWR+ Q+GV F+ R Sbjct: 1 MKSDKRKSPRKPLRYSAWIALDDEQRVSCLLSDVSDSGARLEVDGSANIPAQFVLLLAQRNAPKRYCTVVWRENNQIGVRFERR 84
BLAST of mRNA_P-wetherbeei_contig13263.1.1 vs. uniprot
Match: A0A833GFT6_9HYPH (PilZ domain-containing protein n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GFT6_9HYPH) HSP 1 Score: 78.6 bits (192), Expect = 5.720e-17 Identity = 36/81 (44.44%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 7 RDKRRSRRRPMRYHAVLV-LDGDAQRGCILSDISDTGARIDVDTADELPNRFVLLLSGNGSPQRHCRVVWRQPTQVGVNFD 246 +D+RR+RRR +RY A +V +DG C+++D+S TGAR+ V+ LP+ F+L L+G +P+R C +VWR +Q GV F+ Sbjct: 6 KDQRRNRRRSLRYPARIVSVDGRETMPCVVTDVSQTGARVKVEDGGSLPDDFILRLAGGENPRRVCHLVWRAKSQAGVRFE 86
BLAST of mRNA_P-wetherbeei_contig13263.1.1 vs. uniprot
Match: A0A1W6ZXK2_9HYPH (PilZ domain-containing protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZXK2_9HYPH) HSP 1 Score: 65.9 bits (159), Expect = 3.680e-12 Identity = 36/78 (46.15%), Postives = 43/78 (55.13%), Query Frame = 1 Query: 13 KRRSRRRPMRYHAVLVLDGD-AQRGCILSDISDTGARIDVDTADELPNRFVLLLSGNGSPQRHCRVVWRQPTQVGVNF 243 K R RR + A LV DGD A R C + D+SD GAR+++D D LP RF L S RHC V W+ VGV F Sbjct: 7 KTRPSRRRVDKQAWLVFDGDFALRPCTVIDMSDDGARLNIDQTDRLPKRFSLTFSRASRAGRHCEVRWKHGRSVGVKF 84
BLAST of mRNA_P-wetherbeei_contig13263.1.1 vs. uniprot
Match: A0A6S6QW69_9HYPH (PilZ domain-containing protein n=1 Tax=Terrihabitans soli TaxID=708113 RepID=A0A6S6QW69_9HYPH) HSP 1 Score: 63.9 bits (154), Expect = 2.900e-11 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 10 DKRRSRRRPMRYHAVLVLDGDAQRGCILSDISDTGARIDVDTADELPNRFVLLLSGNGSPQRHCRVVWRQPTQVGVNF 243 D+R RR M A ++L + C + ++S GA I++DTA ELP RFVL LSGN +R C +VW+ T +GV+F Sbjct: 8 DQRAYPRRAMARRAAILLSQTQEVECTIRNLSRNGAMIELDTAIELPKRFVLDLSGNIVVRRLCDLVWQDGTTLGVHF 85
BLAST of mRNA_P-wetherbeei_contig13263.1.1 vs. uniprot
Match: A0A127EZL0_9HYPH (PilZ domain-containing protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EZL0_9HYPH) HSP 1 Score: 61.6 bits (148), Expect = 2.960e-10 Identity = 30/73 (41.10%), Postives = 46/73 (63.01%), Query Frame = 1 Query: 64 DGDAQRGCILSDISDTGARIDVDTADELPNRFVLLLSGNGSPQRHCRVVWRQPTQVGVNFDGRLPADERTGLV 282 +G R C ++DIS+TGAR+ + D++P++FVLL++G+ S + CRV WR +VGV F + R LV Sbjct: 23 NGSLPRDCTITDISETGARLFA-SGDDIPDQFVLLITGDKSIREECRVAWRLGGEVGVEFITKEREFRRAELV 94
BLAST of mRNA_P-wetherbeei_contig13263.1.1 vs. uniprot
Match: UPI000378F141 (hypothetical protein n=1 Tax=Methylobacterium sp. 77 TaxID=1101192 RepID=UPI000378F141) HSP 1 Score: 59.7 bits (143), Expect = 9.000e-10 Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = 1 Query: 22 SRRRPMRYHAVLVLDGDAQRGCILSDISDTGARIDVDTADELPNRFVLLLSGNGSPQRHCRVVWRQPTQVGVNF 243 SR+ R A+ D A C++ D S+TGA+I+V+T D +PN F L+++ P R C VVWR+ ++GV F Sbjct: 9 SRKDAFRIGALSFGDRQADIDCLVWDQSETGAQIEVETPDAIPNEFTLVMTAYAKP-RACTVVWRRERKLGVAF 81
BLAST of mRNA_P-wetherbeei_contig13263.1.1 vs. uniprot
Match: UPI001EDEE03F (PilZ domain-containing protein n=1 Tax=Methylobacterium marchantiae TaxID=600331 RepID=UPI001EDEE03F) HSP 1 Score: 59.7 bits (143), Expect = 9.000e-10 Identity = 30/74 (40.54%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 22 SRRRPMRYHAVLVLDGDAQRGCILSDISDTGARIDVDTADELPNRFVLLLSGNGSPQRHCRVVWRQPTQVGVNF 243 SR+ R A+ D A C++ D S+TGA+I+V+T D +P++FVL+++ P R C VVWR+ ++GV F Sbjct: 9 SRKDAFRVGALSFGDRQADIDCLVWDHSETGAQIEVETPDAVPDQFVLVMTAYAKP-RSCTVVWRRERKLGVAF 81
BLAST of mRNA_P-wetherbeei_contig13263.1.1 vs. uniprot
Match: A0A257KPC6_9BRAD (Pilus assembly protein PilZ n=1 Tax=Bradyrhizobiaceae bacterium PARB1 TaxID=2015576 RepID=A0A257KPC6_9BRAD) HSP 1 Score: 59.7 bits (143), Expect = 1.560e-9 Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 1 Query: 52 VLVLDGDAQRGCILSDISDTGARIDVDTADELPN--RFVLLLSGNGSPQRHCRVVWRQPTQVGVNF 243 ++ +DG +R CIL D+S+TGA++ V+T+ E N F LLLS G R C + W Q+GVNF Sbjct: 20 MMGIDGTWRRACILEDVSETGAKLTVETSVEGLNLKEFFLLLSSTGLAYRRCELGWVNGDQIGVNF 85
BLAST of mRNA_P-wetherbeei_contig13263.1.1 vs. uniprot
Match: UPI002012232E (PilZ domain-containing protein n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI002012232E) HSP 1 Score: 57.8 bits (138), Expect = 5.250e-9 Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 1 Query: 13 KRRSRRRPMRYHAVLVLDGD-AQRGCILSDISDTGARIDVDTADELPNRFVLLLSGNGSPQRHCRVVWRQPTQVGVNF 243 K+R+ RR + + + GD A R CI+ DISD+GA++ +D +F L LS P R CRV WR+ TQ+GV F Sbjct: 7 KQRAPRRRIDREGWITMPGDFAARRCIVIDISDSGAKLQIDDPRFTRTQFELRLSRT-DPGRRCRVTWRRGTQIGVAF 83 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13263.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13263.1.1 >prot_P-wetherbeei_contig13263.1.1 ID=prot_P-wetherbeei_contig13263.1.1|Name=mRNA_P-wetherbeei_contig13263.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=95bp MQRDKRRSRRRPMRYHAVLVLDGDAQRGCILSDISDTGARIDVDTADELPback to top mRNA from alignment at P-wetherbeei_contig13263:365..649+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13263.1.1 ID=mRNA_P-wetherbeei_contig13263.1.1|Name=mRNA_P-wetherbeei_contig13263.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig13263:365..649+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13263:365..649+ >mRNA_P-wetherbeei_contig13263.1.1 ID=mRNA_P-wetherbeei_contig13263.1.1|Name=mRNA_P-wetherbeei_contig13263.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig13263:365..649+ (Phaeothamnion wetherbeei SAG_119_79)back to top |