mRNA_P-wetherbeei_contig1312.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: F0YBI4_AURAN (Ribonucloprotein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBI4_AURAN) HSP 1 Score: 160 bits (405), Expect = 1.680e-48 Identity = 75/108 (69.44%), Postives = 95/108 (87.96%), Query Frame = 1 Query: 4 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISP 327 YEER+ A+S IS PLA+ K+TK++HKLV+K + AK +RRGVKEV+KA+RKGA GLC++AGDISPIDVI HLP+FCEE+SVPY++VPSK +LG AA TKRPTSC ++SP Sbjct: 1 YEERLAALSPISTPLADEKLTKKLHKLVKKASSAKALRRGVKEVVKAIRKGATGLCIIAGDISPIDVICHLPIFCEEKSVPYIYVPSKQDLGFAALTKRPTSCVMVSP 108
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A7S3MHC4_9STRA (Ribonucloprotein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHC4_9STRA) HSP 1 Score: 157 bits (398), Expect = 5.640e-47 Identity = 72/132 (54.55%), Postives = 102/132 (77.27%), Query Frame = 1 Query: 4 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPSTDFIAQELFEECLAYVSRQTAEQ 399 Y+E++K VS I++PLA++K TK++HKLV+K + AK VRRGVKEV+KA+RKG+KG C++AGDISPIDV+VHLP+ CE++ +PY +VPSK +LG AA+TKRPTSC L++P F L+++ +Q Sbjct: 11 YDEKVKFVSKIAQPLASKKTTKKLHKLVKKASQAKFVRRGVKEVVKALRKGSKGFCIIAGDISPIDVVVHLPIMCEDRRIPYFYVPSKLDLGAAASTKRPTSCILVTPKDSFSEMSLYDKLFKEAQEALVQQ 142
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A7S2LTM4_9STRA (Ribonucloprotein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LTM4_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.540e-45 Identity = 76/122 (62.30%), Postives = 96/122 (78.69%), Query Frame = 1 Query: 4 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPSTDFIAQELFEECL 369 YE+R +AV++IS+PLA++K TKR HKLV+K T +K RRGVKEVIK +RKG KGLCV+AGDI P+DVI HLP+ EE PY+FVPSK +LG AA+TKRPTSC L+SP F Q+L++ L Sbjct: 18 YEDRCRAVNAISQPLASKKSTKRAHKLVKKATSSKCCRRGVKEVIKGIRKGEKGLCVIAGDIFPLDVISHLPILLEETGSPYIFVPSKQDLGAAASTKRPTSCVLVSPKVGFDGQDLYDGLL 139
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A1V9ZK33_9STRA (Ribonucloprotein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZK33_9STRA) HSP 1 Score: 152 bits (384), Expect = 7.340e-45 Identity = 72/124 (58.06%), Postives = 98/124 (79.03%), Query Frame = 1 Query: 4 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPSTD-FIAQELFEECLA 372 YEER+K VS I+ PLAN+K+TK+++KL++K T K +RGVKEV+KA+RKG KGLC++AGDISP+DVI H+PV CE + YVF PSK +LG +A++KRPTSC +++PS F QE ++E LA Sbjct: 12 YEERVKHVSVIANPLANKKLTKKVYKLIKKSTKVKCTKRGVKEVVKAIRKGEKGLCIIAGDISPVDVISHIPVLCENNDIAYVFTPSKVDLGASASSKRPTSCIMVTPSKQGFNVQESYDEILA 135
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A7S2SAZ3_9STRA (Ribonucloprotein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SAZ3_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.180e-44 Identity = 74/125 (59.20%), Postives = 100/125 (80.00%), Query Frame = 1 Query: 4 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPSTDFIAQELFEECLAYV 378 YE+R+KAVS IS P+A +K+TK++H LV+K + AK +RRGVKEV+KA+RK KG+CV+AGDISPIDVI H+PVFCEE+ VPY++VPSK +LG AA+TKRPTS L+ F +EL+++ + V Sbjct: 39 YEQRLKAVSPISNPMAPKKLTKKLHXLVKKASSAKGIRRGVKEVVKALRKNEKGICVIAGDISPIDVISHIPVFCEEKDVPYIYVPSKQDLGAAASTKRPTSVVLVQCKPQFEEKELYDKLMEEV 163
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A024TAU2_9STRA (Ribonucloprotein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TAU2_9STRA) HSP 1 Score: 150 bits (379), Expect = 4.350e-44 Identity = 75/128 (58.59%), Postives = 99/128 (77.34%), Query Frame = 1 Query: 4 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPSTD-FIAQELFEECLAYVSR 384 YEER+K VS I++PLA +K+TK+++KLV+K T K +RGVKEV+KA+RKG KGLCV+AGDISPIDVI H+PV CE + YVF PSK +LG +A++KRPTSC +I+P F QE ++E LA V + Sbjct: 13 YEERVKHVSVIAQPLAVKKLTKKLYKLVKKSTKVKCTKRGVKEVVKAIRKGEKGLCVIAGDISPIDVISHIPVLCESNDISYVFTPSKVDLGASASSKRPTSCIMITPGKHGFNVQETYDELLAEVKK 140
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: K3WNU8_GLOUD (Ribonucloprotein n=5 Tax=Oomycota TaxID=4762 RepID=K3WNU8_GLOUD) HSP 1 Score: 150 bits (378), Expect = 6.170e-44 Identity = 74/128 (57.81%), Postives = 99/128 (77.34%), Query Frame = 1 Query: 4 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPS-TDFIAQELFEECLAYVSR 384 YEER+K VS I+KPLA++K TKR +K+V+K T K ++RGVKEV+K++RKG KG+C++AGDISPIDVI H+PV CEE +PY+F PSK +LG +A +KRPTSC LI+P F A + +EE L V + Sbjct: 13 YEERVKHVSVIAKPLASKKQTKRAYKVVKKATKVKGIKRGVKEVVKSIRKGEKGVCIIAGDISPIDVISHIPVLCEENDIPYLFTPSKVDLGASALSKRPTSCILITPGKAGFNALDAYEELLEEVKQ 140
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A6U3Z8L3_9STRA (Ribonucloprotein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Z8L3_9STRA) HSP 1 Score: 150 bits (379), Expect = 6.480e-44 Identity = 75/121 (61.98%), Postives = 100/121 (82.64%), Query Frame = 1 Query: 4 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALI-SPSTDFIAQELFEE 363 YEER+KAV+ IS+PLA +K TKR HKLV+K + +K++RRGVKEV+K +RKG KGL +LAGDI PIDVI HLP+ EE +VPY+FVPSK +LG AA+TKRPTSC L+ +P DF A++++++ Sbjct: 25 YEERVKAVNVISQPLACKKSTKRAHKLVKKASSSKMIRRGVKEVVKGLRKGDKGLAILAGDIFPIDVISHLPILLEENNVPYLFVPSKQDLGSAASTKRPTSCVLVKTPKKDFDAKDIYDQ 145
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A7S2UX33_9STRA (Ribonucloprotein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX33_9STRA) HSP 1 Score: 149 bits (375), Expect = 2.710e-43 Identity = 73/131 (55.73%), Postives = 100/131 (76.34%), Query Frame = 1 Query: 4 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPSTDFIAQELFEECLAYVSRQTAE 396 YEER+KAVS I+KP+A K+TK++HKLV+K + AK +RRGVKEV+K+++K KGLC++AGDISPIDVI H+P+ CEE S+PY++VPSK +LG AA TKRPTS + P F QEL++ + + + E Sbjct: 28 YEERMKAVSVIAKPMAPPKLTKKMHKLVKKASKAKCLRRGVKEVVKSLKKKEKGLCIIAGDISPIDVISHIPILCEEASIPYIYVPSKQDLGGAALTKRPTSTIFVVPKGKFKDQELYDSMVTETNARAIE 158
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A2D4CEW8_PYTIN (Ribonucloprotein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEW8_PYTIN) HSP 1 Score: 147 bits (372), Expect = 3.590e-43 Identity = 67/109 (61.47%), Postives = 92/109 (84.40%), Query Frame = 1 Query: 4 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPS 330 YE+R+K +S I+KPLA++K TKR++K+V+K T K ++RGVKEV+KA+RKG KGLCV+AGDISP+DV+ H+PV CEE +PY+F PSK +LG +A +KRPTSC LI+P+ Sbjct: 14 YEDRVKHISVIAKPLASKKHTKRVYKVVKKATKVKGIKRGVKEVVKALRKGEKGLCVIAGDISPVDVVSHIPVLCEEHDIPYIFTPSKVDLGASALSKRPTSCILITPN 122 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1312.2.1 >prot_P-wetherbeei_contig1312.2.1 ID=prot_P-wetherbeei_contig1312.2.1|Name=mRNA_P-wetherbeei_contig1312.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=140bp PYEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRback to top mRNA from alignment at P-wetherbeei_contig1312:4570..6081- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1312.2.1 ID=mRNA_P-wetherbeei_contig1312.2.1|Name=mRNA_P-wetherbeei_contig1312.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1512bp|location=Sequence derived from alignment at P-wetherbeei_contig1312:4570..6081- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1312:4570..6081- >mRNA_P-wetherbeei_contig1312.2.1 ID=mRNA_P-wetherbeei_contig1312.2.1|Name=mRNA_P-wetherbeei_contig1312.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig1312:4570..6081- (Phaeothamnion wetherbeei SAG_119_79)back to top |