prot_P-wetherbeei_contig1312.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1312.2.1
Unique Nameprot_P-wetherbeei_contig1312.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length140
Homology
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: F0YBI4_AURAN (Ribonucloprotein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBI4_AURAN)

HSP 1 Score: 160 bits (405), Expect = 1.680e-48
Identity = 75/108 (69.44%), Postives = 95/108 (87.96%), Query Frame = 0
Query:    2 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISP 109
            YEER+ A+S IS PLA+ K+TK++HKLV+K + AK +RRGVKEV+KA+RKGA GLC++AGDISPIDVI HLP+FCEE+SVPY++VPSK +LG AA TKRPTSC ++SP
Sbjct:    1 YEERLAALSPISTPLADEKLTKKLHKLVKKASSAKALRRGVKEVVKAIRKGATGLCIIAGDISPIDVICHLPIFCEEKSVPYIYVPSKQDLGFAALTKRPTSCVMVSP 108          
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A7S3MHC4_9STRA (Ribonucloprotein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHC4_9STRA)

HSP 1 Score: 157 bits (398), Expect = 5.640e-47
Identity = 72/132 (54.55%), Postives = 102/132 (77.27%), Query Frame = 0
Query:    2 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPSTDFIAQELFEECLAYVSRQTAEQ 133
            Y+E++K VS I++PLA++K TK++HKLV+K + AK VRRGVKEV+KA+RKG+KG C++AGDISPIDV+VHLP+ CE++ +PY +VPSK +LG AA+TKRPTSC L++P   F    L+++          +Q
Sbjct:   11 YDEKVKFVSKIAQPLASKKTTKKLHKLVKKASQAKFVRRGVKEVVKALRKGSKGFCIIAGDISPIDVVVHLPIMCEDRRIPYFYVPSKLDLGAAASTKRPTSCILVTPKDSFSEMSLYDKLFKEAQEALVQQ 142          
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A7S2LTM4_9STRA (Ribonucloprotein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LTM4_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.540e-45
Identity = 76/122 (62.30%), Postives = 96/122 (78.69%), Query Frame = 0
Query:    2 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPSTDFIAQELFEECL 123
            YE+R +AV++IS+PLA++K TKR HKLV+K T +K  RRGVKEVIK +RKG KGLCV+AGDI P+DVI HLP+  EE   PY+FVPSK +LG AA+TKRPTSC L+SP   F  Q+L++  L
Sbjct:   18 YEDRCRAVNAISQPLASKKSTKRAHKLVKKATSSKCCRRGVKEVIKGIRKGEKGLCVIAGDIFPLDVISHLPILLEETGSPYIFVPSKQDLGAAASTKRPTSCVLVSPKVGFDGQDLYDGLL 139          
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A1V9ZK33_9STRA (Ribonucloprotein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZK33_9STRA)

HSP 1 Score: 152 bits (384), Expect = 7.340e-45
Identity = 72/124 (58.06%), Postives = 98/124 (79.03%), Query Frame = 0
Query:    2 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPSTD-FIAQELFEECLA 124
            YEER+K VS I+ PLAN+K+TK+++KL++K T  K  +RGVKEV+KA+RKG KGLC++AGDISP+DVI H+PV CE   + YVF PSK +LG +A++KRPTSC +++PS   F  QE ++E LA
Sbjct:   12 YEERVKHVSVIANPLANKKLTKKVYKLIKKSTKVKCTKRGVKEVVKAIRKGEKGLCIIAGDISPVDVISHIPVLCENNDIAYVFTPSKVDLGASASSKRPTSCIMVTPSKQGFNVQESYDEILA 135          
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A7S2SAZ3_9STRA (Ribonucloprotein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SAZ3_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.180e-44
Identity = 74/125 (59.20%), Postives = 100/125 (80.00%), Query Frame = 0
Query:    2 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPSTDFIAQELFEECLAYV 126
            YE+R+KAVS IS P+A +K+TK++H LV+K + AK +RRGVKEV+KA+RK  KG+CV+AGDISPIDVI H+PVFCEE+ VPY++VPSK +LG AA+TKRPTS  L+     F  +EL+++ +  V
Sbjct:   39 YEQRLKAVSPISNPMAPKKLTKKLHXLVKKASSAKGIRRGVKEVVKALRKNEKGICVIAGDISPIDVISHIPVFCEEKDVPYIYVPSKQDLGAAASTKRPTSVVLVQCKPQFEEKELYDKLMEEV 163          
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A024TAU2_9STRA (Ribonucloprotein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TAU2_9STRA)

HSP 1 Score: 150 bits (379), Expect = 4.350e-44
Identity = 75/128 (58.59%), Postives = 99/128 (77.34%), Query Frame = 0
Query:    2 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPSTD-FIAQELFEECLAYVSR 128
            YEER+K VS I++PLA +K+TK+++KLV+K T  K  +RGVKEV+KA+RKG KGLCV+AGDISPIDVI H+PV CE   + YVF PSK +LG +A++KRPTSC +I+P    F  QE ++E LA V +
Sbjct:   13 YEERVKHVSVIAQPLAVKKLTKKLYKLVKKSTKVKCTKRGVKEVVKAIRKGEKGLCVIAGDISPIDVISHIPVLCESNDISYVFTPSKVDLGASASSKRPTSCIMITPGKHGFNVQETYDELLAEVKK 140          
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: K3WNU8_GLOUD (Ribonucloprotein n=5 Tax=Oomycota TaxID=4762 RepID=K3WNU8_GLOUD)

HSP 1 Score: 150 bits (378), Expect = 6.170e-44
Identity = 74/128 (57.81%), Postives = 99/128 (77.34%), Query Frame = 0
Query:    2 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPS-TDFIAQELFEECLAYVSR 128
            YEER+K VS I+KPLA++K TKR +K+V+K T  K ++RGVKEV+K++RKG KG+C++AGDISPIDVI H+PV CEE  +PY+F PSK +LG +A +KRPTSC LI+P    F A + +EE L  V +
Sbjct:   13 YEERVKHVSVIAKPLASKKQTKRAYKVVKKATKVKGIKRGVKEVVKSIRKGEKGVCIIAGDISPIDVISHIPVLCEENDIPYLFTPSKVDLGASALSKRPTSCILITPGKAGFNALDAYEELLEEVKQ 140          
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A6U3Z8L3_9STRA (Ribonucloprotein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Z8L3_9STRA)

HSP 1 Score: 150 bits (379), Expect = 6.480e-44
Identity = 75/121 (61.98%), Postives = 100/121 (82.64%), Query Frame = 0
Query:    2 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALI-SPSTDFIAQELFEE 121
            YEER+KAV+ IS+PLA +K TKR HKLV+K + +K++RRGVKEV+K +RKG KGL +LAGDI PIDVI HLP+  EE +VPY+FVPSK +LG AA+TKRPTSC L+ +P  DF A++++++
Sbjct:   25 YEERVKAVNVISQPLACKKSTKRAHKLVKKASSSKMIRRGVKEVVKGLRKGDKGLAILAGDIFPIDVISHLPILLEENNVPYLFVPSKQDLGSAASTKRPTSCVLVKTPKKDFDAKDIYDQ 145          
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A7S2UX33_9STRA (Ribonucloprotein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX33_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.710e-43
Identity = 73/131 (55.73%), Postives = 100/131 (76.34%), Query Frame = 0
Query:    2 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPSTDFIAQELFEECLAYVSRQTAE 132
            YEER+KAVS I+KP+A  K+TK++HKLV+K + AK +RRGVKEV+K+++K  KGLC++AGDISPIDVI H+P+ CEE S+PY++VPSK +LG AA TKRPTS   + P   F  QEL++  +   + +  E
Sbjct:   28 YEERMKAVSVIAKPMAPPKLTKKMHKLVKKASKAKCLRRGVKEVVKSLKKKEKGLCIIAGDISPIDVISHIPILCEEASIPYIYVPSKQDLGGAALTKRPTSTIFVVPKGKFKDQELYDSMVTETNARAIE 158          
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Match: A0A2D4CEW8_PYTIN (Ribonucloprotein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEW8_PYTIN)

HSP 1 Score: 147 bits (372), Expect = 3.590e-43
Identity = 67/109 (61.47%), Postives = 92/109 (84.40%), Query Frame = 0
Query:    2 YEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVRKGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKRPTSCALISPS 110
            YE+R+K +S I+KPLA++K TKR++K+V+K T  K ++RGVKEV+KA+RKG KGLCV+AGDISP+DV+ H+PV CEE  +PY+F PSK +LG +A +KRPTSC LI+P+
Sbjct:   14 YEDRVKHISVIAKPLASKKHTKRVYKVVKKATKVKGIKRGVKEVVKALRKGEKGLCVIAGDISPVDVVSHIPVLCEEHDIPYIFTPSKVDLGASALSKRPTSCILITPN 122          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1312.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0YBI4_AURAN1.680e-4869.44Ribonucloprotein (Fragment) n=1 Tax=Aureococcus an... [more]
A0A7S3MHC4_9STRA5.640e-4754.55Ribonucloprotein n=1 Tax=Spumella elongata TaxID=8... [more]
A0A7S2LTM4_9STRA1.540e-4562.30Ribonucloprotein n=1 Tax=Leptocylindrus danicus Ta... [more]
A0A1V9ZK33_9STRA7.340e-4558.06Ribonucloprotein n=4 Tax=Saprolegniaceae TaxID=476... [more]
A0A7S2SAZ3_9STRA1.180e-4459.20Ribonucloprotein n=1 Tax=Rhizochromulina marina Ta... [more]
A0A024TAU2_9STRA4.350e-4458.59Ribonucloprotein n=5 Tax=Aphanomyces TaxID=100860 ... [more]
K3WNU8_GLOUD6.170e-4457.81Ribonucloprotein n=5 Tax=Oomycota TaxID=4762 RepID... [more]
A0A6U3Z8L3_9STRA6.480e-4461.98Ribonucloprotein n=1 Tax=Ditylum brightwellii TaxI... [more]
A0A7S2UX33_9STRA2.710e-4355.73Ribonucloprotein n=1 Tax=Fibrocapsa japonica TaxID... [more]
A0A2D4CEW8_PYTIN3.590e-4361.47Ribonucloprotein n=1 Tax=Pythium insidiosum TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002415H/ACA ribonucleoprotein complex, subunit Nhp2-likePRINTSPR00883NUCLEARHMGcoord: 11..24
score: 31.43
coord: 41..51
score: 38.18
coord: 85..97
score: 56.92
coord: 24..39
score: 26.25
IPR018492Ribosomal protein L7Ae/L8/Nhp2 familyPRINTSPR00881L7ARS6FAMILYcoord: 38..52
score: 34.24
coord: 57..70
score: 34.42
coord: 73..83
score: 49.59
coord: 83..97
score: 43.64
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 4..129
e-value: 3.5E-42
score: 145.0
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 9..111
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 24..110
e-value: 3.7E-24
score: 84.3
NoneNo IPR availablePANTHERPTHR23105:SF146SUBFAMILY NOT NAMEDcoord: 4..122
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 4..122
IPR004037Ribosomal protein L7Ae conserved sitePROSITEPS01082RIBOSOMAL_L7AEcoord: 76..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1312contigP-wetherbeei_contig1312:4570..6081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1312.2.1mRNA_P-wetherbeei_contig1312.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1312 4570..6081 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1312.2.1 ID=prot_P-wetherbeei_contig1312.2.1|Name=mRNA_P-wetherbeei_contig1312.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=140bp
PYEERIKAVSSISKPLANRKMTKRIHKLVRKGTHAKVVRRGVKEVIKAVR
KGAKGLCVLAGDISPIDVIVHLPVFCEEQSVPYVFVPSKTELGIAAATKR
PTSCALISPSTDFIAQELFEECLAYVSRQTAEQVPSNKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002415H/ACA_rnp_Nhp2-like
IPR018492Ribosomal_L7Ae/L8/Nhp2
IPR029064L30e-like
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR004037Ribosomal_L7Ae_CS