mRNA_P-wetherbeei_contig1296.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1296.3.1 vs. uniprot
Match: D7FNH1_ECTSI (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH1_ECTSI) HSP 1 Score: 286 bits (731), Expect = 6.110e-92 Identity = 148/234 (63.25%), Postives = 191/234 (81.62%), Query Frame = 2 Query: 2 ERAQPADRKKFGLLEKHKDYVLRARDFGRKRDRMNSLRLKAAMRNPDEFYFAMNKTKTKEGVHTIVADPALKDDVVRLLKTQDVAYVNMKRAADEKKVERMKETLHGITETPRNKHTIFVDSEKKAASFDPAEHFDTVPALAYRAFNRPRRATLETAAVTGAATRQELKKVFKKRDSAYRAATERIERAAKLRKAMEHLQAQRTVMNSKGTKKKVKKAANGQPAVFKWKRERAK 703 ERAQPA R+K GLLEKHKDYVLRAR++G+KRDRM +L+LKAAM+NPDEFYFAM++ KT+ GVH + L DVV+LLKTQD+ YV+ R+ADE+K +++E+LH + PRNKHTIF DSEK+A FD A+HFDTVP LA RAFNRPR+ TLE A VTGA R++LKKV KKRD++Y +R+ERA K++KA HL+AQR VMNSKGTK+KV++A +G+PAV++WK+ER++ Sbjct: 15 ERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAETLPHDVVQLLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEAKEFDVAKHFDTVPELADRAFNRPRKDTLEKAQVTGATNRRQLKKVLKKRDASYSELMQRLERAEKMKKAEVHLEAQRKVMNSKGTKRKVQEAKDGRPAVYRWKKERSR 248
BLAST of mRNA_P-wetherbeei_contig1296.3.1 vs. uniprot
Match: A0A836CK24_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK24_9STRA) HSP 1 Score: 260 bits (665), Expect = 5.510e-82 Identity = 137/234 (58.55%), Postives = 173/234 (73.93%), Query Frame = 2 Query: 2 ERAQPADRKKFGLLEKHKDYVLRARDFGRKRDRMNSLRLKAAMRNPDEFYFAMNKTKTKEGVHTIVADPALKDDVVRLLKTQDVAYVNMKRAADEKKVERMKETLHGITETPRNKHTIFVDSEKKAASFDPAEHFDTVPALAYRAFNRPRRATLETAAVTGAATRQELKKVFKKRDSAYRAATERIERAAKLRKAMEHLQAQRTVMNSKGTKKKVKKAANGQPAVFKWKRERAK 703 ERAQPA R KFGLLEKH DYVLRARD+ KRDR+N+LRLKA++RNPDEFYF M+K KTKEGVH + +L + +LKTQD+AY++MKRA D KK ER+K LH + P+N HT+FV ++++ +FD AE+FDT P LA R FNRPR ATLE+ V GA +R +LKK K+RD+AY+ R ERA K+ +A HL AQR +M ++GT KVK A GQP V+KWKR+RAK Sbjct: 15 ERAQPASRSKFGLLEKHSDYVLRARDYNAKRDRLNALRLKASLRNPDEFYFGMHKAKTKEGVHQVEGSSSLDHETAHMLKTQDMAYIHMKRAVDIKKAERLKAGLHMLDAPPQNTHTVFVKNKRQRRAFDAAEYFDTAPELAGRTFNRPRMATLESKQVLGAESRADLKKALKQRDAAYQEVEAREERARKMTRAAAHLAAQRALMTARGTVTKVKGAEKGQPPVYKWKRQRAK 248
BLAST of mRNA_P-wetherbeei_contig1296.3.1 vs. uniprot
Match: A0A4D9DA46_9STRA (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA46_9STRA) HSP 1 Score: 239 bits (610), Expect = 1.140e-73 Identity = 137/236 (58.05%), Postives = 171/236 (72.46%), Query Frame = 2 Query: 2 ERAQPADRKKFGLLEKHKDYVLRARDFGRKRDRMNSLRLKAAMRNPDEFYFAMNKTKTKEGVHTI-VADPALKDDVVRLLKTQDVAYVNMKRAADEKKVERMKETLHGITETPRNKHTIFVDSEKKAASFDPAEHFDTVPALAYRAFNRPRRATLET-AAVTGAATRQELKKVFKKRDSAYRAATERIERAAKLRKAMEHLQAQRTVMNSKGTKKKVKKAANGQPAVFKWKRERAK 703 ER+QPA RKKFGLLEKHKDYV RA D+ RK + SLR KAA RNPDEFYFAM K +TKEGVH + A+ +L D + LLKTQD+ YV MKRA D KK E+++ LH +TE NKHT+FVD+E + +FDPA+HF T PAL RAFNRP+ TLET AV G A ELKKV K R+ AY ER++R+ ++ +EH+Q ++ VM KG K+KV++A +G+PAVFKWKRER K Sbjct: 17 ERSQPAARKKFGLLEKHKDYVQRANDYKRKSKALASLREKAAFRNPDEFYFAMTKGQTKEGVHRVRPAEASLPHDHIALLKTQDMRYVTMKRALDVKKAEKLQAGLHFLTEEAANKHTVFVDTEAEVETFDPAKHFGTDPALVTRAFNRPKLETLETPGAVLGVANVGELKKVRKAREKAYTELGERLKRSLSFKEVLEHMQVEKNVMG-KGRKRKVQEAEDGKPAVFKWKRERRK 251
BLAST of mRNA_P-wetherbeei_contig1296.3.1 vs. uniprot
Match: A0A5D6XJY8_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJY8_9STRA) HSP 1 Score: 217 bits (553), Expect = 3.910e-65 Identity = 124/238 (52.10%), Postives = 164/238 (68.91%), Query Frame = 2 Query: 2 ERAQPADRKKFGLLEKHKDYVLRARDFGRKRDRMNSLRLKAAMRNPDEFYFAMNKTKTKEGVHTIVAD------PALKDDVVRLLKTQDVAYVNMKRAADEKKVERMKETLHGITETPRNKHTIFVDSEKKAASFDPAEHFDTVPALAYRAFNRPRRATLETAAVTGAATRQELKKVFKKRDSAYRAATERIERAAKLRKAMEHLQAQRTVMNSKGTKKKVKKAANGQPAVFKWKRER 697 ER QP +RKK GLLEKHKDYV RARD+ K+DR+ +++LKAA RNPDEFYF MN T+T+ GVH V+D AL D +++LKTQDVAY+++KRA D +K E++ LH I NKH +FVDSE + A FD A HFDT P LA RAFNR R L+T A+ ++ +E+KK ++RD YR ++R+ERAA L + L +R V +KG K K+K A NGQPAV++WK++R Sbjct: 14 ERGQPQERKKLGLLEKHKDYVKRARDYNSKQDRLRTMQLKAAFRNPDEFYFRMNATRTEGGVH--VSDNNRLDGKALTADALKVLKTQDVAYLHLKRAVDMRKAEKLNAGLHFIDAPTANKHVVFVDSEAQLAKFDVAAHFDTAPELADRAFNRVRMDALKTLALPAVSSAKEIKKRNRERDGVYRELSDRLERAATLDRMRAKLDLERKVQ-AKGKKMKIKDAENGQPAVYRWKKQR 248
BLAST of mRNA_P-wetherbeei_contig1296.3.1 vs. uniprot
Match: A0A8K1CCZ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCZ2_PYTOL) HSP 1 Score: 210 bits (535), Expect = 1.810e-62 Identity = 114/236 (48.31%), Postives = 165/236 (69.92%), Query Frame = 2 Query: 2 ERAQPADRKKFGLLEKHKDYVLRARDFGRKRDRMNSLRLKAAMRNPDEFYFAMNKTKTKEGVHTIVADPA--LKDDVVRLLKTQDVAYVNMKRAADEKKVERMKETLHGITETPRNKHTIFVDSEKKAASFDPAEHFDTVPALAYRAFNRPRRATLETAAVTGAATRQELKKVFKKRDSAYRAATERIERAAKLRKAMEHLQAQRTVMNSKGTKKKVKKAANGQPAVFKWKRERAK 703 ER Q +RKK GLLEKHKDYVLRARD+ +K+DR+ +++LKAA RNPDEFYF MN T+T++GVH + + L + +++LKTQD+AY++MKRA D +K E++ + LH I NKHT+FVDS + +FD A HFDT P LA RAFNR R+ TL+T + +++L+ + K+RD+ YR +R+ RA K+++ + L +R V +KG K+KV+ + +P V+KWK+ER K Sbjct: 14 ERGQLQERKKLGLLEKHKDYVLRARDYNKKQDRLRTMKLKAAFRNPDEFYFKMNTTRTEDGVHVSENNHSEKLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLTQGLHFIDAPKNNKHTVFVDSSEDLNTFDVATHFDTAPELADRAFNRLRKETLKTTTIQATTDKKQLRALTKERDAVYRELNDRLIRATKIQQMSDRLDLERKVQ-AKGKKRKVQDGDSSRPPVYKWKKERQK 248
BLAST of mRNA_P-wetherbeei_contig1296.3.1 vs. uniprot
Match: K3WAT9_GLOUD (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAT9_GLOUD) HSP 1 Score: 206 bits (523), Expect = 1.200e-60 Identity = 115/237 (48.52%), Postives = 165/237 (69.62%), Query Frame = 2 Query: 2 ERAQPADRKKFGLLEKHKDYVLRARDFGRKRDRMNSLRLKAAMRNPDEFYFAMNKTKTKEGVHTIVAD--PALKDDVVRLLKTQDVAYVNMKRAADEKKVERMKETLHGITETPR-NKHTIFVDSEKKAASFDPAEHFDTVPALAYRAFNRPRRATLETAAVTGAATRQELKKVFKKRDSAYRAATERIERAAKLRKAMEHLQAQRTVMNSKGTKKKVKKAANGQPAVFKWKRERAK 703 ER Q +RKK GLLEKHKDYV RARD+ +K+D + +L +KAA RNPDEFYF MN T+T++GVH + L + +++LKTQD+AY++MKRA D +K E++ E LH I + NKH +FVDS+ + SFD A+HFDTVP +A RAFNR R+ TL+T ++ ++ LKK+ +RD+ YR +R++RA+ + + L +R V +KG K K+K A +GQPAV++WK++R K Sbjct: 15 ERGQLRERKKLGLLEKHKDYVKRARDYNKKQDHLKALAVKAAFRNPDEFYFRMNSTRTEDGVHVSTHNHHKQLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLNEGLHFIDAAGKDNKHVVFVDSKDEVESFDVAKHFDTVPEIADRAFNRLRKDTLKTVSLPAVQDKKTLKKLGIERDAVYRELNDRLQRASTIDRMRAKLDLERKVQ-AKGKKMKIKDAEDGQPAVYRWKKQRQK 250
BLAST of mRNA_P-wetherbeei_contig1296.3.1 vs. uniprot
Match: A0A7S2W8G3_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8G3_9STRA) HSP 1 Score: 200 bits (509), Expect = 1.880e-58 Identity = 118/247 (47.77%), Postives = 163/247 (65.99%), Query Frame = 2 Query: 2 ERAQPADRKKFGLLEKHKDYVLRARDFGRKRDRMNSLRLKAAMRNPDEFYFAMNKTKTKEGVHTIV----ADPALKDDVVRLLKTQDVAYVNMKRAADEKKVERMKETLHGITETPRNKHTIFVDSEKKAASFDPAEHFDTVPALAYRAFNRPRRATLE---------TAAVTGAATRQELKKVFKKRDSAYRAATERIERAAKLRKAMEHLQAQRTVMNSKGTKKKVKKAANGQPAVFKWKRERAK 703 ER+Q A R GLLEK KDYV RARDF RK ++ +LR KA RNPDEFYF M KTK+GVH AD DD++ L+K+QD+ Y++MK+A D++K ER++ LH + + P N+HT+F+D K +FD AEHFDT+P LA RAFNRPRR E T +T +++Q KK+ K +D AY ER+ER+ KLRK ++ + ++ VM KG K+KV+ +++G P V+KWKR+RA+ Sbjct: 15 ERSQVASRAHLGLLEKKKDYVERARDFQRKTGKIKNLRKKARERNPDEFYFGMVNQKTKDGVHVAERNDGADKLSHDDIL-LMKSQDLGYLSMKKAVDDRKSERLQSGLHMLLDKPLNQHTVFLDKSKDVETFDAAEHFDTMPELAGRAFNRPRRKAFEADKEGSIASTPVMTSTSSKQ-YKKIMKSKDKAYEDLAERLERSEKLRKLIQRKEVEKKVMG-KGRKRKVEGSSSGAPPVYKWKRKRAR 258
BLAST of mRNA_P-wetherbeei_contig1296.3.1 vs. uniprot
Match: A0A2V0P5L3_9CHLO (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P5L3_9CHLO) HSP 1 Score: 200 bits (508), Expect = 2.140e-58 Identity = 117/234 (50.00%), Postives = 151/234 (64.53%), Query Frame = 2 Query: 2 ERAQPADRKKFGLLEKHKDYVLRARDFGRKRDRMNSLRLKAAMRNPDEFYFAMNKTKTKEGVHTIVADPALK--DDVVRLLKTQDVAYVNMKRAADEKKVERMKETLHGITETPRNKHTIFVDSEKKAASFDPAEHFDTVPALAYRAFNRPRRATLETAAVTGAATRQELKKVFKKRDSAYRAATERIERAAKLRKAMEHLQAQRTVMNSKGTKKKVKKAANGQPAVFKWKRER 697 ERAQPA R K+GLLEK KDY RARDF RK + +L+ KA RNPDEFYF+M + T+ GVH + A K + L++TQDV Y+ K ++ KK+ERMKETLH I +KH +F+DS+ +A FDPAE FDT L RA+NRPRRA LE+ A A + K +++ +AY+ ++R+ER A L K E L+A + VM +G KKKVK A PAVFKWKRER Sbjct: 16 ERAQPAARSKYGLLEKKKDYRQRARDFHRKEKAIKALQRKAEERNPDEFYFSMERASTRGGVHVVPTAEANKYSQQELALMRTQDVGYLRSKATSEAKKIERMKETLHFIGAPRASKHKVFLDSKAEARDFDPAEFFDTPRELLGRAYNRPRRAQLESEAAVSAPEPKAAAKAERRKHAAYKELSQRVERQAALAKLAERLEAGKAVMTGRGRKKKVKGATADAPAVFKWKRER 249
BLAST of mRNA_P-wetherbeei_contig1296.3.1 vs. uniprot
Match: D0NVW8_PHYIT (U3 small nucleolar RNA-associated protein 11 n=14 Tax=Phytophthora TaxID=4783 RepID=D0NVW8_PHYIT) HSP 1 Score: 197 bits (502), Expect = 1.630e-57 Identity = 117/237 (49.37%), Postives = 157/237 (66.24%), Query Frame = 2 Query: 2 ERAQPADRKKFGLLEKHKDYVLRARDFGRKRDRMNSLRLKAAMRNPDEFYFAMNKTKTKEGVHTIVAD--PALKDDVVRLLKTQDVAYVNMKRAADEKKVERMKETLHGITETPRNKHTIFVDSEKKAASFDPAEHFDTVPALAYRAFNRPRRATLETAAVTGAATRQELK-KVFKKRDSAYRAATERIERAAKLRKAMEHLQAQRTVMNSKGTKKKVKKAANGQPAVFKWKRERAK 703 ER Q +R+K GLLEKHKDYV RARD+ K+ R+ +L+LKAA+RNPDEFY M TKT+ GVH + +++ + +R LKTQD+AY++MKRA D +K ER+ LH + N HT+FVD E++ SFD AEHFDT P L RAFNR R+ LETA + A + K K+ ++D+ YR +R+ RA KL + L +R V +KG KKKVK A NG PAV++WK++R K Sbjct: 15 ERGQLRERRKLGLLEKHKDYVKRARDYNSKQKRLKTLQLKAALRNPDEFYHRMRGTKTEGGVHVSTHNHIKSVETEALRTLKTQDLAYLHMKRAVDLRKAERLNRGLHFVDAPKNNNHTVFVDDEEQVDSFDVAEHFDTAPELVDRAFNRIRKRDLETAELPDLAANPKQKYKMQVEKDAMYRELRDRLARANKLGQMSAKLDLERKVQ-AKGRKKKVKAAENGMPAVYRWKQQRQK 250
BLAST of mRNA_P-wetherbeei_contig1296.3.1 vs. uniprot
Match: A4RYN6_OSTLU (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RYN6_OSTLU) HSP 1 Score: 197 bits (502), Expect = 2.640e-57 Identity = 122/251 (48.61%), Postives = 161/251 (64.14%), Query Frame = 2 Query: 2 ERAQPADRKKFGLLEKHKDYVLRARDFGRKRDRMNSLRLKAAMRNPDEFYFAMNKTKTKEGVHTIVADPALK--DDVVRLLKTQDVAYVNMKRAADEKKVERMKETLHGITETPRNKHTIFVDSEKKAASFDPAEHFDTVPALAYRAFNRPRRATLETA-AVTGA------------ATRQELKKVFKKRDSAYRAATERIERAAKLRKAMEHLQAQRTVMNSKGTKKKVKKAA--NGQPAVFKWKRERAK 703 ER+Q ++RK+FGLLEK KDYVLRARD+ +K D +N+L+ KAA RNPDEFYFAM K KT +GVH + K ++ +R++KTQDV YV MK A + KKVE+MK LHGI + KHT+FVD+E++A SFD AEHFDTVP L R FNRPRRA LE AV G A+ +K++ + + AY+ T ERA KL+ + Q+ + +SKG K K+ K + + FKWK+ER K Sbjct: 16 ERSQLSERKRFGLLEKKKDYVLRARDYHKKEDAINALKRKAAYRNPDEFYFAMQKAKTDDGVHVARSTEQNKYTEEELRVMKTQDVKYVQMKAAIEGKKVEKMKRNLHGIGVPVKRKHTVFVDTEEEAKSFDAAEHFDTVPELVNRTFNRPRRAQLEDEDAVVGVRSDGAAGSSGTGASEISMKRLTRMQKGAYKTYTAYDERAKKLKDMSAEMAMQKVISHSKGHKVKITKTNPDGTKTSYFKWKQERQK 266 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1296.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1296.3.1 >prot_P-wetherbeei_contig1296.3.1 ID=prot_P-wetherbeei_contig1296.3.1|Name=mRNA_P-wetherbeei_contig1296.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=202bp MNSLRLKAAMRNPDEFYFAMNKTKTKEGVHTIVADPALKDDVVRLLKTQDback to top mRNA from alignment at P-wetherbeei_contig1296:5385..7461- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1296.3.1 ID=mRNA_P-wetherbeei_contig1296.3.1|Name=mRNA_P-wetherbeei_contig1296.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2077bp|location=Sequence derived from alignment at P-wetherbeei_contig1296:5385..7461- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1296:5385..7461- >mRNA_P-wetherbeei_contig1296.3.1 ID=mRNA_P-wetherbeei_contig1296.3.1|Name=mRNA_P-wetherbeei_contig1296.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=606bp|location=Sequence derived from alignment at P-wetherbeei_contig1296:5385..7461- (Phaeothamnion wetherbeei SAG_119_79)back to top |