mRNA_P-wetherbeei_contig1295.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: A0A836C8M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M7_9STRA) HSP 1 Score: 271 bits (693), Expect = 3.130e-85 Identity = 128/228 (56.14%), Postives = 159/228 (69.74%), Query Frame = 3 Query: 312 DWREFRAKLAVGGEEEWQAQLKRNQNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTGLEELSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAYDDL 995 DWR FRAKL G EE W +L+RN NP L DV TWAH L PE GCLLLASP+HF GQ++ + QAVIFL +H +GS GF+LNRPTQ+ IG TTG+E + CPL GGD+G+GTVQ++H F +R+ A +I GV VGG D + V G+A P F+FFL L G PG L+ E++ G W AA SKE++LK CI LPVPLWREVL L+GGK+S++ R Y DL Sbjct: 74 DWRRFRAKLIAGSEEAWHERLQRNVNPRLKDVETWAHELAAPEPGCLLLASPDHFT-GQESQYSQAVIFLVQHNANGSVGFVLNRPTQFTIGTVTTGMEVFNACPLMWGGDLGRGTVQMVHAFDAERMPGARKIIDGVYVGGGVLDAQEAVARGQAKPGDFKFFLQLFGKAPGHLQAEMDAGKWICAATSKELILKPCINLPVPLWREVLTLMGGKHSILGRLTYGDL 300
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: D7G408_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G408_ECTSI) HSP 1 Score: 258 bits (660), Expect = 4.350e-79 Identity = 124/249 (49.80%), Postives = 169/249 (67.87%), Query Frame = 3 Query: 267 QDDEPESATLSPPM---QDWREFRAKLAVGGEEEWQAQLKRNQNP-LLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTG--LEELSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAYDDL 995 ++++ E T+ P +D+R FRAKL G +E+W+ QL+RN N LA WAH L PEKGCL++A F Q TYF++AVIFLA + +GSAGFILNRPT ++G G L + + PLY+GGDVG+G VQ++HPFG +++ D+ +IPGV +GG+ ++ R+V G A + F+F L LCGW PGQLE E++RGVW A S V+LK C+ LPVP+WREV+ L+G KY L+AR YDDL Sbjct: 142 EEEDKEGDTVFLPTGDNKDFRLFRAKLRAGSDEKWKEQLRRNVNVGQLAGQDAWAHELSAPEKGCLIVAKSTQFSMAQ-TYFNEAVIFLASYDEAGSAGFILNRPTSVQLGDLVEGNALRQFQKTPLYLGGDVGEGNVQILHPFGPEKLTDSMEIIPGVYIGGAVDEADRMVASGRAKVDDFKFMLHLCGWAPGQLEDEIQRGVWMPVATSTNVILKHCLSLPVPMWREVMTLMGPKYGLLARDTYDDL 389
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: A0A6H5K1D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D3_9PHAE) HSP 1 Score: 214 bits (546), Expect = 2.080e-63 Identity = 118/273 (43.22%), Postives = 159/273 (58.24%), Query Frame = 3 Query: 267 QDDEPESATLSPPM---QDWREFRAKLAVGGEEEWQAQLKRNQNP-LLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTG--LEELSECPLYMGGDV----GQGTVQLMHPFGGDRVRDAHVVI-----------PGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVS---------KEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAYDDL 995 +++ E T+ P +D+R FRAKL G +E+W+ QL+RN N LA WAH L PEKGCL++A F Q TYF++AVIFLA + +GSAGFILNRPT ++G G L + + PLY+GGDV QG + R+ + VV P V +GG+ ++ R+V G A + F+F L LCGW PGQLE E++RGVW A S ++V+LK C+ LPVP+WREV+ L+G KY L+AR YDDL Sbjct: 14 EEEHEEGDTVFLPTGDNKDFRLFRAKLRAGSDEKWKEQLRRNVNVGQLAGQDAWAHELSAPEKGCLIIAKSTQFSMAQ-TYFNEAVIFLASYDEAGSAGFILNRPTSVQLGDLVEGNALRQFQKSPLYLGGDVVSSRKQGQIDCSTSHESSRLPPSTVVFAAPLSPDRLSAPQVYIGGAVDEADRMVASGRAKVDDFKFMLHLCGWAPGQLEDEIQRGVWMPVATSTNVSCKNNWRQVILKHCLSLPVPMWREVMTLMGPKYGLLARDTYDDL 285
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: A0A1Y5IDK1_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IDK1_OSTTA) HSP 1 Score: 214 bits (544), Expect = 1.170e-62 Identity = 117/257 (45.53%), Postives = 154/257 (59.92%), Query Frame = 3 Query: 264 MQDDEPESATLSPPMQ-DWREFRAKLAVGGEE-----------EWQAQLKRNQNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTGLE-ELSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEAS-PEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAYDD 992 M+D + ++P ++ DWREFRA+L E E ++ QNP LA WAH + PEKGCLL+A+ + F+ QQ YFHQAVI + EH +GS G ILNRPTQY +G + +E LY GGDVG GTV +H G + V+ + V+PGV +GG + + +DG P++F+FF CGW PGQLE E ERGVWY A +KE+ LKQ I LP PLWRE+L+L GG+ + IA AY D Sbjct: 51 MEDGRGDGDDVAPALESDWREFRARLLAREREATPEERASAISEENMKVLEAQNPRLAQAKPWAHVIAAPEKGCLLVAADQEFRMSQQ-YFHQAVILVLEHHENGSMGIILNRPTQYNMGYVSGEPSGPFAENALYFGGDVGDGTVSFLH--GREDVKGSVEVLPGVYLGGYESACELVQQDGSTCHPDEFKFFARYCGWAPGQLESECERGVWYPIAAAKELSLKQVIQLPKPLWREILELCGGELADIAARAYQD 304
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: C1E5G6_MICCC (Uncharacterized protein n=3 Tax=Micromonas TaxID=38832 RepID=C1E5G6_MICCC) HSP 1 Score: 209 bits (532), Expect = 2.800e-60 Identity = 116/242 (47.93%), Postives = 145/242 (59.92%), Query Frame = 3 Query: 312 DWREFRAKLAVG--GEEEW------------QAQLKRNQNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTGLE-ELSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAYDD 992 DWR+FRA L G++E +L R QNP LA WAH + PEKGCLLLA+ + F GQQ YFHQAVI L EH GS G ILNRPTQY +G + + +E LY GGDVG GTV +H G D+V+ + V+PGV +GG + LV+ E +F+FF CGW PGQL++E ERGVWY A SK++ LKQ I LP PLWRE+L+L GG+ A AY + Sbjct: 127 DWRDFRAMLISQEKGKDELVDDDEIAAASGPNLELLRKQNPKLAKDKPWAHRIGAPEKGCLLLAAADEFTLGQQ-YFHQAVILLLEHHDKGSMGVILNRPTQYNMGYVSGQSDGPFAENALYFGGDVGDGTVSFLH--GSDKVQGSAEVLPGVYLGGY-DSACELVKKEEVDANEFKFFARYCGWAPGQLKRECERGVWYPVACSKQLALKQVIQLPKPLWREILELCGGELKSAAARAYGE 364
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: C1MN92_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MN92_MICPC) HSP 1 Score: 208 bits (529), Expect = 6.600e-60 Identity = 116/247 (46.96%), Postives = 141/247 (57.09%), Query Frame = 3 Query: 312 DWREFRAKL---------AVGGEEEWQAQLKR----------NQNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQAT-TGLEELSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAYDD 992 DWR+FRAKL A G + A+++ QNP LA WAH + PEKGCLLLAS E FK GQQ YFHQAVI + EH GS G ILNRPTQY +G + LY GGDVG GTV +H G V V+PGV +GG + LV+DG P F+FF CGW PGQLE E ERGVWY A S+++ LKQ I LP PLWREV++L GG+ ++ +Y + Sbjct: 118 DWRDFRAKLVNSESAGSDAPGASADEAARVEAASGENIKLLSTQNPELASETPWAHVIGAPEKGCLLLASEEEFKLGQQ-YFHQAVILVLEHHEKGSMGVILNRPTQYNMGYVGGDDSSPFANNQLYFGGDVGDGTVSFLH--GSSEVAGGSEVLPGVYLGGY-DSACELVKDGTLKPTDFKFFARYCGWAPGQLESECERGVWYPVACSRQLALKQVIQLPKPLWREVMELCGGELRQTSKRSYGE 360
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: A4S673_OSTLU (Uncharacterized protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S673_OSTLU) HSP 1 Score: 200 bits (508), Expect = 1.030e-57 Identity = 116/254 (45.67%), Postives = 152/254 (59.84%), Query Frame = 3 Query: 276 EPESATLSPPMQ-DWREFRAKL-----AVGGEEEW-------QAQLK--RNQNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTGLE-ELSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEAS-PEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAY 986 E + ++P ++ DWREFRA+L AV EEE + LK QNP LA WAH + PEKGCLL+A+ F+ QQ YFHQAVI + EH +GS G ILNRPTQY +G + ++ LY GGDVG GTV +H G + V+ + V+PGV +GG + + +DG ++F+FF CGW PGQLE E ERGVW+ A +KE+ LKQ I LP PLWRE+ +L GG+ +AR AY Sbjct: 15 ERRTQDVAPALESDWREFRAQLLARERAVTPEEERARAAAVSEENLKVLETQNPRLAASAPWAHVIGAPEKGCLLVAADHEFRMSQQ-YFHQAVILVLEHHENGSMGVILNRPTQYDMGYVSGEANGPFAKNALYFGGDVGDGTVSFLH--GREDVKGSVEVLPGVYLGGYDSACELVQQDGSTCHADEFKFFARYCGWAPGQLESECERGVWFPVAAAKELSLKQVIQLPKPLWREISELCGGELEEMARKAY 265
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: A0A7S0D198_MICPS (Hypothetical protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D198_MICPS) HSP 1 Score: 198 bits (503), Expect = 9.520e-56 Identity = 114/244 (46.72%), Postives = 142/244 (58.20%), Query Frame = 3 Query: 312 DWREFRAKL---------AVGGEEEWQA------QLKRNQNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTGLEE--LSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAYDD 992 DWR+FRA+L + EE+ + +L R QNP LA WAH + PE+GCLL+A ++F GQQ YFHQAVI + EH GS G ILNRPTQY +G + G E ++ LY GGDVG GTV +H G V + V GV +GG E LV+ GE +FF CGWGPGQL+ E ERGVWY A SK++ LKQ I LP PLWREV +L+GG +R AY + Sbjct: 138 DWRDFRARLVSMESGAGSSTDEEEKVEEASGPNLELLREQNPALAAEKPWAHVIGAPERGCLLVARGDNFTQGQQ-YFHQAVILMLEHNEKGSMGVILNRPTQYSMGYVS-GDESGPFAQNALYFGGDVGDGTVSFLH--GSSSVTGSVEVSAGVFLGGY-ESACELVKTGEVEANDCKFFARYCGWGPGQLQSECERGVWYPVACSKQIALKQVIQLPKPLWREVSELVGGDVGYESRKAYGE 376
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: A0A7S0PMA6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PMA6_9CHLO) HSP 1 Score: 195 bits (496), Expect = 1.420e-55 Identity = 110/237 (46.41%), Postives = 144/237 (60.76%), Query Frame = 3 Query: 273 DEPESATLSPPMQ-DWREFRAKLA-----VGGEEEWQAQLKRN---------QNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTGLEEL-SECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWRE 935 D P S ++P ++ DWREFRAKL V EEE + + QNP LA WAH + PEKGCLL+A+ F+ QQ YFHQAVI + EH +GS G ILNRPTQY +G + ++ + ++ LY GGDVG GTV +H G + V+ + V+PG+ +GG + LV + A P++F+FF CGW PGQLE E ERGVW+ A +KE+ LKQ I LP PLWRE Sbjct: 85 DVPSSDDVAPALESDWREFRAKLLAQEKNVKLEEERARAMAASGENLKVLEAQNPKLASAAPWAHVIAAPEKGCLLVAADHEFRMSQQ-YFHQAVILVLEHHENGSMGVILNRPTQYDMGYVSGDVDGVFAKNALYFGGDVGDGTVSFLH--GREDVKGSVEVLPGMYLGGY-DSACALVEEQGAKPDEFKFFARYCGWAPGQLESECERGVWFPVAGAKELALKQVIQLPKPLWRE 317
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: A0A830HZ81_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HZ81_9CHLO) HSP 1 Score: 192 bits (487), Expect = 1.100e-52 Identity = 115/283 (40.64%), Postives = 156/283 (55.12%), Query Frame = 3 Query: 270 DDEPESATLSPPMQDWREFRAKL----------AVGG--------------------EE-------------EWQAQLKRNQNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTGLEE-LSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAY 986 +DE E TL P + DWREFRA+L A G EE E L +Q P LA+ P WAH + E+GCLL+A+ + F +Q YF QAVI L +H P GS G ILNRPTQ+++ + ++ ++E E LY GGDVG GTV ++H G V A V GV +GG V+R V DG + P+ ++FF CGWG GQL++EVE GVW+ + ++ ++LKQC+ LP PLWREV++L GG + A+ AY Sbjct: 159 EDEDEEITL-PELGDWREFRARLVEQQKLVGMPAAGDVVRDTSADDVPXXXXXXAAVEELELRERHRQIIATEANRDLMESQTPWLANEPVWAHPIAQAERGCLLVAAADQFS-DKQEYFAQAVILLLDHRPEGSVGVILNRPTQWELNEVSSAIDECFGEQRLYFGGDVGAGTVLVIH--GDGDVDGAREVTTGVYLGGYDSVVER-VSDGSSKPQDYKFFSKCCGWGAGQLDREVEAGVWHPVSAARPLLLKQCLQLPKPLWREVMELCGGDLADEAKDAY 436 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1295.3.2 >prot_P-wetherbeei_contig1295.3.2 ID=prot_P-wetherbeei_contig1295.3.2|Name=mRNA_P-wetherbeei_contig1295.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=302bp MKGRDLFRATFVFFACSRSSAFISSGSAQGRNARSQPHLAYGGGAHLATRback to top mRNA from alignment at P-wetherbeei_contig1295:2242..4654- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1295.3.2 ID=mRNA_P-wetherbeei_contig1295.3.2|Name=mRNA_P-wetherbeei_contig1295.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2413bp|location=Sequence derived from alignment at P-wetherbeei_contig1295:2242..4654- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1295:2242..4654- >mRNA_P-wetherbeei_contig1295.3.2 ID=mRNA_P-wetherbeei_contig1295.3.2|Name=mRNA_P-wetherbeei_contig1295.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=906bp|location=Sequence derived from alignment at P-wetherbeei_contig1295:2242..4654- (Phaeothamnion wetherbeei SAG_119_79)back to top |