mRNA_P-wetherbeei_contig1295.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1295.3.2
Unique NamemRNA_P-wetherbeei_contig1295.3.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: A0A836C8M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M7_9STRA)

HSP 1 Score: 271 bits (693), Expect = 3.130e-85
Identity = 128/228 (56.14%), Postives = 159/228 (69.74%), Query Frame = 3
Query:  312 DWREFRAKLAVGGEEEWQAQLKRNQNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTGLEELSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAYDDL 995
            DWR FRAKL  G EE W  +L+RN NP L DV TWAH L  PE GCLLLASP+HF  GQ++ + QAVIFL +H  +GS GF+LNRPTQ+ IG  TTG+E  + CPL  GGD+G+GTVQ++H F  +R+  A  +I GV VGG   D +  V  G+A P  F+FFL L G  PG L+ E++ G W  AA SKE++LK CI LPVPLWREVL L+GGK+S++ R  Y DL
Sbjct:   74 DWRRFRAKLIAGSEEAWHERLQRNVNPRLKDVETWAHELAAPEPGCLLLASPDHFT-GQESQYSQAVIFLVQHNANGSVGFVLNRPTQFTIGTVTTGMEVFNACPLMWGGDLGRGTVQMVHAFDAERMPGARKIIDGVYVGGGVLDAQEAVARGQAKPGDFKFFLQLFGKAPGHLQAEMDAGKWICAATSKELILKPCINLPVPLWREVLTLMGGKHSILGRLTYGDL 300          
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: D7G408_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G408_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 4.350e-79
Identity = 124/249 (49.80%), Postives = 169/249 (67.87%), Query Frame = 3
Query:  267 QDDEPESATLSPPM---QDWREFRAKLAVGGEEEWQAQLKRNQNP-LLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTG--LEELSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAYDDL 995
            ++++ E  T+  P    +D+R FRAKL  G +E+W+ QL+RN N   LA    WAH L  PEKGCL++A    F   Q TYF++AVIFLA +  +GSAGFILNRPT  ++G    G  L +  + PLY+GGDVG+G VQ++HPFG +++ D+  +IPGV +GG+ ++  R+V  G A  + F+F L LCGW PGQLE E++RGVW   A S  V+LK C+ LPVP+WREV+ L+G KY L+AR  YDDL
Sbjct:  142 EEEDKEGDTVFLPTGDNKDFRLFRAKLRAGSDEKWKEQLRRNVNVGQLAGQDAWAHELSAPEKGCLIVAKSTQFSMAQ-TYFNEAVIFLASYDEAGSAGFILNRPTSVQLGDLVEGNALRQFQKTPLYLGGDVGEGNVQILHPFGPEKLTDSMEIIPGVYIGGAVDEADRMVASGRAKVDDFKFMLHLCGWAPGQLEDEIQRGVWMPVATSTNVILKHCLSLPVPMWREVMTLMGPKYGLLARDTYDDL 389          
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: A0A6H5K1D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D3_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 2.080e-63
Identity = 118/273 (43.22%), Postives = 159/273 (58.24%), Query Frame = 3
Query:  267 QDDEPESATLSPPM---QDWREFRAKLAVGGEEEWQAQLKRNQNP-LLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTG--LEELSECPLYMGGDV----GQGTVQLMHPFGGDRVRDAHVVI-----------PGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVS---------KEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAYDDL 995
            +++  E  T+  P    +D+R FRAKL  G +E+W+ QL+RN N   LA    WAH L  PEKGCL++A    F   Q TYF++AVIFLA +  +GSAGFILNRPT  ++G    G  L +  + PLY+GGDV     QG +         R+  + VV            P V +GG+ ++  R+V  G A  + F+F L LCGW PGQLE E++RGVW   A S         ++V+LK C+ LPVP+WREV+ L+G KY L+AR  YDDL
Sbjct:   14 EEEHEEGDTVFLPTGDNKDFRLFRAKLRAGSDEKWKEQLRRNVNVGQLAGQDAWAHELSAPEKGCLIIAKSTQFSMAQ-TYFNEAVIFLASYDEAGSAGFILNRPTSVQLGDLVEGNALRQFQKSPLYLGGDVVSSRKQGQIDCSTSHESSRLPPSTVVFAAPLSPDRLSAPQVYIGGAVDEADRMVASGRAKVDDFKFMLHLCGWAPGQLEDEIQRGVWMPVATSTNVSCKNNWRQVILKHCLSLPVPMWREVMTLMGPKYGLLARDTYDDL 285          
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: A0A1Y5IDK1_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IDK1_OSTTA)

HSP 1 Score: 214 bits (544), Expect = 1.170e-62
Identity = 117/257 (45.53%), Postives = 154/257 (59.92%), Query Frame = 3
Query:  264 MQDDEPESATLSPPMQ-DWREFRAKLAVGGEE-----------EWQAQLKRNQNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTGLE-ELSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEAS-PEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAYDD 992
            M+D   +   ++P ++ DWREFRA+L     E           E   ++   QNP LA    WAH +  PEKGCLL+A+ + F+  QQ YFHQAVI + EH  +GS G ILNRPTQY +G  +       +E  LY GGDVG GTV  +H  G + V+ +  V+PGV +GG     + + +DG    P++F+FF   CGW PGQLE E ERGVWY  A +KE+ LKQ I LP PLWRE+L+L GG+ + IA  AY D
Sbjct:   51 MEDGRGDGDDVAPALESDWREFRARLLAREREATPEERASAISEENMKVLEAQNPRLAQAKPWAHVIAAPEKGCLLVAADQEFRMSQQ-YFHQAVILVLEHHENGSMGIILNRPTQYNMGYVSGEPSGPFAENALYFGGDVGDGTVSFLH--GREDVKGSVEVLPGVYLGGYESACELVQQDGSTCHPDEFKFFARYCGWAPGQLESECERGVWYPIAAAKELSLKQVIQLPKPLWREILELCGGELADIAARAYQD 304          
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: C1E5G6_MICCC (Uncharacterized protein n=3 Tax=Micromonas TaxID=38832 RepID=C1E5G6_MICCC)

HSP 1 Score: 209 bits (532), Expect = 2.800e-60
Identity = 116/242 (47.93%), Postives = 145/242 (59.92%), Query Frame = 3
Query:  312 DWREFRAKLAVG--GEEEW------------QAQLKRNQNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTGLE-ELSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAYDD 992
            DWR+FRA L     G++E               +L R QNP LA    WAH +  PEKGCLLLA+ + F  GQQ YFHQAVI L EH   GS G ILNRPTQY +G  +   +   +E  LY GGDVG GTV  +H  G D+V+ +  V+PGV +GG  +    LV+  E    +F+FF   CGW PGQL++E ERGVWY  A SK++ LKQ I LP PLWRE+L+L GG+    A  AY +
Sbjct:  127 DWRDFRAMLISQEKGKDELVDDDEIAAASGPNLELLRKQNPKLAKDKPWAHRIGAPEKGCLLLAAADEFTLGQQ-YFHQAVILLLEHHDKGSMGVILNRPTQYNMGYVSGQSDGPFAENALYFGGDVGDGTVSFLH--GSDKVQGSAEVLPGVYLGGY-DSACELVKKEEVDANEFKFFARYCGWAPGQLKRECERGVWYPVACSKQLALKQVIQLPKPLWREILELCGGELKSAAARAYGE 364          
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: C1MN92_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MN92_MICPC)

HSP 1 Score: 208 bits (529), Expect = 6.600e-60
Identity = 116/247 (46.96%), Postives = 141/247 (57.09%), Query Frame = 3
Query:  312 DWREFRAKL---------AVGGEEEWQAQLKR----------NQNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQAT-TGLEELSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAYDD 992
            DWR+FRAKL         A G   +  A+++            QNP LA    WAH +  PEKGCLLLAS E FK GQQ YFHQAVI + EH   GS G ILNRPTQY +G          +   LY GGDVG GTV  +H  G   V     V+PGV +GG  +    LV+DG   P  F+FF   CGW PGQLE E ERGVWY  A S+++ LKQ I LP PLWREV++L GG+    ++ +Y +
Sbjct:  118 DWRDFRAKLVNSESAGSDAPGASADEAARVEAASGENIKLLSTQNPELASETPWAHVIGAPEKGCLLLASEEEFKLGQQ-YFHQAVILVLEHHEKGSMGVILNRPTQYNMGYVGGDDSSPFANNQLYFGGDVGDGTVSFLH--GSSEVAGGSEVLPGVYLGGY-DSACELVKDGTLKPTDFKFFARYCGWAPGQLESECERGVWYPVACSRQLALKQVIQLPKPLWREVMELCGGELRQTSKRSYGE 360          
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: A4S673_OSTLU (Uncharacterized protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S673_OSTLU)

HSP 1 Score: 200 bits (508), Expect = 1.030e-57
Identity = 116/254 (45.67%), Postives = 152/254 (59.84%), Query Frame = 3
Query:  276 EPESATLSPPMQ-DWREFRAKL-----AVGGEEEW-------QAQLK--RNQNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTGLE-ELSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEAS-PEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAY 986
            E  +  ++P ++ DWREFRA+L     AV  EEE        +  LK    QNP LA    WAH +  PEKGCLL+A+   F+  QQ YFHQAVI + EH  +GS G ILNRPTQY +G  +       ++  LY GGDVG GTV  +H  G + V+ +  V+PGV +GG     + + +DG     ++F+FF   CGW PGQLE E ERGVW+  A +KE+ LKQ I LP PLWRE+ +L GG+   +AR AY
Sbjct:   15 ERRTQDVAPALESDWREFRAQLLARERAVTPEEERARAAAVSEENLKVLETQNPRLAASAPWAHVIGAPEKGCLLVAADHEFRMSQQ-YFHQAVILVLEHHENGSMGVILNRPTQYDMGYVSGEANGPFAKNALYFGGDVGDGTVSFLH--GREDVKGSVEVLPGVYLGGYDSACELVQQDGSTCHADEFKFFARYCGWAPGQLESECERGVWFPVAAAKELSLKQVIQLPKPLWREISELCGGELEEMARKAY 265          
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: A0A7S0D198_MICPS (Hypothetical protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D198_MICPS)

HSP 1 Score: 198 bits (503), Expect = 9.520e-56
Identity = 114/244 (46.72%), Postives = 142/244 (58.20%), Query Frame = 3
Query:  312 DWREFRAKL---------AVGGEEEWQA------QLKRNQNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTGLEE--LSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAYDD 992
            DWR+FRA+L         +   EE+ +       +L R QNP LA    WAH +  PE+GCLL+A  ++F  GQQ YFHQAVI + EH   GS G ILNRPTQY +G  + G E    ++  LY GGDVG GTV  +H  G   V  +  V  GV +GG  E    LV+ GE      +FF   CGWGPGQL+ E ERGVWY  A SK++ LKQ I LP PLWREV +L+GG     +R AY +
Sbjct:  138 DWRDFRARLVSMESGAGSSTDEEEKVEEASGPNLELLREQNPALAAEKPWAHVIGAPERGCLLVARGDNFTQGQQ-YFHQAVILMLEHNEKGSMGVILNRPTQYSMGYVS-GDESGPFAQNALYFGGDVGDGTVSFLH--GSSSVTGSVEVSAGVFLGGY-ESACELVKTGEVEANDCKFFARYCGWGPGQLQSECERGVWYPVACSKQIALKQVIQLPKPLWREVSELVGGDVGYESRKAYGE 376          
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: A0A7S0PMA6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PMA6_9CHLO)

HSP 1 Score: 195 bits (496), Expect = 1.420e-55
Identity = 110/237 (46.41%), Postives = 144/237 (60.76%), Query Frame = 3
Query:  273 DEPESATLSPPMQ-DWREFRAKLA-----VGGEEEWQAQLKRN---------QNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTGLEEL-SECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWRE 935
            D P S  ++P ++ DWREFRAKL      V  EEE    +  +         QNP LA    WAH +  PEKGCLL+A+   F+  QQ YFHQAVI + EH  +GS G ILNRPTQY +G  +  ++ + ++  LY GGDVG GTV  +H  G + V+ +  V+PG+ +GG  +    LV +  A P++F+FF   CGW PGQLE E ERGVW+  A +KE+ LKQ I LP PLWRE
Sbjct:   85 DVPSSDDVAPALESDWREFRAKLLAQEKNVKLEEERARAMAASGENLKVLEAQNPKLASAAPWAHVIAAPEKGCLLVAADHEFRMSQQ-YFHQAVILVLEHHENGSMGVILNRPTQYDMGYVSGDVDGVFAKNALYFGGDVGDGTVSFLH--GREDVKGSVEVLPGMYLGGY-DSACALVEEQGAKPDEFKFFARYCGWAPGQLESECERGVWFPVAGAKELALKQVIQLPKPLWRE 317          
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Match: A0A830HZ81_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HZ81_9CHLO)

HSP 1 Score: 192 bits (487), Expect = 1.100e-52
Identity = 115/283 (40.64%), Postives = 156/283 (55.12%), Query Frame = 3
Query:  270 DDEPESATLSPPMQDWREFRAKL----------AVGG--------------------EE-------------EWQAQLKRNQNPLLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSGSAGFILNRPTQYKIGQATTGLEE-LSECPLYMGGDVGQGTVQLMHPFGGDRVRDAHVVIPGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEKEVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAY 986
            +DE E  TL P + DWREFRA+L          A G                     EE             E    L  +Q P LA+ P WAH +   E+GCLL+A+ + F   +Q YF QAVI L +H P GS G ILNRPTQ+++ + ++ ++E   E  LY GGDVG GTV ++H  G   V  A  V  GV +GG    V+R V DG + P+ ++FF   CGWG GQL++EVE GVW+  + ++ ++LKQC+ LP PLWREV++L GG  +  A+ AY
Sbjct:  159 EDEDEEITL-PELGDWREFRARLVEQQKLVGMPAAGDVVRDTSADDVPXXXXXXAAVEELELRERHRQIIATEANRDLMESQTPWLANEPVWAHPIAQAERGCLLVAAADQFS-DKQEYFAQAVILLLDHRPEGSVGVILNRPTQWELNEVSSAIDECFGEQRLYFGGDVGAGTVLVIH--GDGDVDGAREVTTGVYLGGYDSVVER-VSDGSSKPQDYKFFSKCCGWGAGQLDREVEAGVWHPVSAARPLLLKQCLQLPKPLWREVMELCGGDLADEAKDAY 436          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1295.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8M7_9STRA3.130e-8556.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G408_ECTSI4.350e-7949.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K1D3_9PHAE2.080e-6343.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Y5IDK1_OSTTA1.170e-6245.53Uncharacterized protein n=2 Tax=Ostreococcus tauri... [more]
C1E5G6_MICCC2.800e-6047.93Uncharacterized protein n=3 Tax=Micromonas TaxID=3... [more]
C1MN92_MICPC6.600e-6046.96Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
A4S673_OSTLU1.030e-5745.67Uncharacterized protein (Fragment) n=1 Tax=Ostreoc... [more]
A0A7S0D198_MICPS9.520e-5646.72Hypothetical protein n=2 Tax=Micromonas pusilla Ta... [more]
A0A7S0PMA6_9CHLO1.420e-5546.41Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A830HZ81_9CHLO1.100e-5240.64Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1295contigP-wetherbeei_contig1295:2242..4654 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G408
PFAMsDUF179
Model size1265
Max annot lvl2759|Eukaryota
KEGG koko:K07735
Hectar predicted targeting categorysignal peptide
Exons7
Evalue2.51e-82
EggNOG OGsCOG1678@1|root,2QRDU@2759|Eukaryota
Ec32 ortholog descriptionProtein of unknown function UPF0301
Ec32 orthologEc-19_000560.1
DescriptionUncharacterized ACR, COG1678
Cds size906
COG categoryK
BRITEko00000,ko03000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1295.3.2prot_P-wetherbeei_contig1295.3.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1295 2509..4562 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185967.6534114-UTR-P-wetherbeei_contig1295:2241..25081683185967.6534114-UTR-P-wetherbeei_contig1295:2241..2508Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1295 2242..2508 -
1683185967.7352185-UTR-P-wetherbeei_contig1295:4562..46541683185967.7352185-UTR-P-wetherbeei_contig1295:4562..4654Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1295 4563..4654 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185967.662216-CDS-P-wetherbeei_contig1295:2508..26191683185967.662216-CDS-P-wetherbeei_contig1295:2508..2619Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1295 2509..2619 -
1683185967.6694613-CDS-P-wetherbeei_contig1295:2830..29881683185967.6694613-CDS-P-wetherbeei_contig1295:2830..2988Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1295 2831..2988 -
1683185967.6789837-CDS-P-wetherbeei_contig1295:3244..33081683185967.6789837-CDS-P-wetherbeei_contig1295:3244..3308Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1295 3245..3308 -
1683185967.688596-CDS-P-wetherbeei_contig1295:3514..35591683185967.688596-CDS-P-wetherbeei_contig1295:3514..3559Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1295 3515..3559 -
1683185967.7012756-CDS-P-wetherbeei_contig1295:3722..38361683185967.7012756-CDS-P-wetherbeei_contig1295:3722..3836Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1295 3723..3836 -
1683185967.7140765-CDS-P-wetherbeei_contig1295:3948..40221683185967.7140765-CDS-P-wetherbeei_contig1295:3948..4022Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1295 3949..4022 -
1683185967.7251315-CDS-P-wetherbeei_contig1295:4222..45621683185967.7251315-CDS-P-wetherbeei_contig1295:4222..4562Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1295 4223..4562 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1295.3.2

>prot_P-wetherbeei_contig1295.3.2 ID=prot_P-wetherbeei_contig1295.3.2|Name=mRNA_P-wetherbeei_contig1295.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=302bp
MKGRDLFRATFVFFACSRSSAFISSGSAQGRNARSQPHLAYGGGAHLATR
IHQTRLQMQDDEPESATLSPPMQDWREFRAKLAVGGEEEWQAQLKRNQNP
LLADVPTWAHTLPGPEKGCLLLASPEHFKFGQQTYFHQAVIFLAEHGPSG
SAGFILNRPTQYKIGQATTGLEELSECPLYMGGDVGQGTVQLMHPFGGDR
VRDAHVVIPGVSVGGSTEDVKRLVRDGEASPEQFRFFLALCGWGPGQLEK
EVERGVWYTAAVSKEVVLKQCIGLPVPLWREVLQLLGGKYSLIARAAYDD
L*
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mRNA from alignment at P-wetherbeei_contig1295:2242..4654-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1295.3.2 ID=mRNA_P-wetherbeei_contig1295.3.2|Name=mRNA_P-wetherbeei_contig1295.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2413bp|location=Sequence derived from alignment at P-wetherbeei_contig1295:2242..4654- (Phaeothamnion wetherbeei SAG_119_79)
CCGCGCAACAAAAAAGAGAAACGCAGGTACCCATTGGCCGTTATCCGAGG AGGCTTCCCGTGTTTTTCACGCAAAACTGCGAGGTGAAAAAGATGAAGGG GAGAGATCTTTTTCGTGCCACCTTTGTCTTCTTCGCGTGCTCAAGGTCTT CCGCTTTCATTTCCAGCGGCAGCGCACAGGGGAGAAATGCTCGCAGTCAG CCCCACCTTGCCTACGGTGGAGGCGCTCATTTGGCGACTCGGATACATCA AACACGGCTCCAAATGCAAGATGATGAGCCTGAGTCTGCCACCCTCAGCC CGCCAATGCAAGATTGGAGAGAGTTTAGGGCGAAGTTGGCCGTCGGAGGA GAAGAGGAATGGCAGGCTCAACTAAAACGGAACCAAAATCCTTTACTAGC TGACGTCCCGACCTGGGCACACACGCTTCCAGGTGCGACGATCCCCGTTG TGGATTGCTCTCGTCTTCCCCTTACCTTTCCCTGCTGCCGTAAGCATTGC ATCTTGATCACAGGGGAAATGAGCGCCCCCTCACTTAAAACTAGATGGCA TTTCCTTTATCTTCTAGGTCACAATAGTCTTCTGTACCCTTTCGTCTCAA TGTTCATCTCTCATCCGTAATCTGGACGGCAGGTCCGGAAAAGGGCTGTC TCCTTCTTGCCTCTCCGGAGCATTTCAAGTTTGGGCAGCAGACATACTTT CACCAGGTGAGAAGCAATGCGAATGTGAGGGCGGATGCCGTTGATGAAAT GAGAAAAGACAGTCGAACTGTTGGAAGGAAACGACACTGTCTCTTCATGT TCGCTTTCACCGTTGCAGGCGGTCATTTTTCTCGCGGAGCACGGGCCGAG TGGCTCGGCAGGTTTCATCCTCAACCGGCCTACGCAGTACAAGATTGGTC AAGCGACGACGGGTCTCGAGGAGCTCAGCGAGGCGAGGCGCAGTACGCTT TGCCACTGCCGCGTTTCATGGCTGGCTCTTCTCATTCTTCCCTTCTCCTG TTTGCTTTTACTTCGCAGTGCCCACACTCTACCTGCTGCGTTTCATGGCT AGCTCTTCTCATTCTTCCTTTGTCCTGTTTGCTTTTACTTCGCAGTGCCC ACTCTACATGGGTGGCGATGTCGGCCAAGGCACGGTGCAAGTGAGAGACG GAGAAAAGACTCAAAGATGCATCCATGGTCAACCGTGCTGTTTCACTGTT GAACGCAGATCCGACTGCCTTCACATTGCTTCTACCTACTAACAGAAGAA ACTAAGTAGTTCAAAGCATCCATCCGGCCCTTTTTGAACCTATGCCACCA TCGCCAACGACCTTTTCTTCTTAAACTCTCTTCTATATGGCCTCAGCTGA TGCACCCTTTCGGCGGGGACCGCGTCAGAGACGCTCACGTTGTCATCCCC GGAGTCTCTGGTGAGCGTTGCAGTCCGCTTCACTCCTCTAGCCAGAAGTG TTCCTCTCGCTTTCCTTTTCTCCACGCGAACGTGTGCTGAAGTATCGCCC GCCAAACCATGCATGCGCCTCTTTTCGGCTTCGAACACACATTGCTTGGA GTTCCTTCCCATCCTCTGTCATTCCCCACCGCTTATAGTCACCCCCTGTT CTTGCCTCCCTGCTGTCCCTCTCACGCACTGTTGACGTGTCGTGCCAACG GGTCGGCGGGCGGCAGTGGGGGGCAGCACAGAGGACGTGAAGCGGCTGGT GCGGGACGGTGAGGCGTCGCCCGAACAGTTTCGCTTCTTCCTCGCCCTCT GCGGGTGGGGCCCCGGCCAGCTCGAGAAGGAGGTGGAGCGCGGCGTGTGG TACACCGCCGCCGTCAGCAAGGAGGTTAGCCGTGCAGGTGCTTCCGATGA TCCTGCAGTTGTAGAGGGATTGGTTGTTCATCGCTCTCTTCTTTTCCAGC ATGGGCGAAGCGAGCCATGCAGATCGAGAGCAGTTACGGATGAGATGATA GTAGTTTCCCGGTGGCACACCTAGCCGCTGCTCTTATTTAGATGGTGATG CACCTTCACTGCCGGCTCTCGCTACTGCTCTGCAGGTCGTACTGAAGCAG TGCATCGGACTCCCGGTGCCACTATGGCGGGAAGTTTTGCAGCTGCTTGG CGGCAAGTATTCGCTGATTGCTCGGGCTGCATATGACGATTTGTAAGGCG TCTTCCTTTCAAGTGTGGCGGAGAAGAATTCATGCTGCCATGCCTCCACG CGACGCCTTCAAGCCGCTGGGAGCAGAATGGGAATGTGAATATGAAGGGC CGCAAGGAGTGTTTGAAGTACACAATACAATTGTAAATGCTTTTTGCCAG TTTTGAACATCATGGATCGGTTTTGGTGTGCTAGGCTGGCGGATTTACGC TCTCTTCCGTCTTTAAAGCCCTTGTTGCAGCGTCTCTTGTTTCCCTGGCA ATTCCATGCTGAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1295:2242..4654-

>mRNA_P-wetherbeei_contig1295.3.2 ID=mRNA_P-wetherbeei_contig1295.3.2|Name=mRNA_P-wetherbeei_contig1295.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=906bp|location=Sequence derived from alignment at P-wetherbeei_contig1295:2242..4654- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGGGAGAGATCTTTTTCGTGCCACCTTTGTCTTCTTCGCGTGCTC
AAGGTCTTCCGCTTTCATTTCCAGCGGCAGCGCACAGGGGAGAAATGCTC
GCAGTCAGCCCCACCTTGCCTACGGTGGAGGCGCTCATTTGGCGACTCGG
ATACATCAAACACGGCTCCAAATGCAAGATGATGAGCCTGAGTCTGCCAC
CCTCAGCCCGCCAATGCAAGATTGGAGAGAGTTTAGGGCGAAGTTGGCCG
TCGGAGGAGAAGAGGAATGGCAGGCTCAACTAAAACGGAACCAAAATCCT
TTACTAGCTGACGTCCCGACCTGGGCACACACGCTTCCAGGTCCGGAAAA
GGGCTGTCTCCTTCTTGCCTCTCCGGAGCATTTCAAGTTTGGGCAGCAGA
CATACTTTCACCAGGCGGTCATTTTTCTCGCGGAGCACGGGCCGAGTGGC
TCGGCAGGTTTCATCCTCAACCGGCCTACGCAGTACAAGATTGGTCAAGC
GACGACGGGTCTCGAGGAGCTCAGCGAGTGCCCACTCTACATGGGTGGCG
ATGTCGGCCAAGGCACGGTGCAACTGATGCACCCTTTCGGCGGGGACCGC
GTCAGAGACGCTCACGTTGTCATCCCCGGAGTCTCTGTGGGGGGCAGCAC
AGAGGACGTGAAGCGGCTGGTGCGGGACGGTGAGGCGTCGCCCGAACAGT
TTCGCTTCTTCCTCGCCCTCTGCGGGTGGGGCCCCGGCCAGCTCGAGAAG
GAGGTGGAGCGCGGCGTGTGGTACACCGCCGCCGTCAGCAAGGAGGTCGT
ACTGAAGCAGTGCATCGGACTCCCGGTGCCACTATGGCGGGAAGTTTTGC
AGCTGCTTGGCGGCAAGTATTCGCTGATTGCTCGGGCTGCATATGACGAT
TTGTAA
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