mRNA_P-wetherbeei_contig12900.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12900.1.1 vs. uniprot
Match: A0A835ZA45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA45_9STRA) HSP 1 Score: 284 bits (726), Expect = 1.750e-91 Identity = 145/226 (64.16%), Postives = 184/226 (81.42%), Query Frame = 1 Query: 1 ALLDQLMGRERNVPLSQRTGRGRHFNDDDVCKFFLAGLCPYVLFSNTKSDLGDHPNREEDNEDLKAAYDALPEAEKSRYTYDRDLMAFLEDLVSGCDRKVERNRVRVDAENADAGIDNAKVQQLVEIDKQIREKTAESEKVAEEGEVDEAQQLLTQVEALRREKAMIEKSATS-KSAKRNVVCEVSGNIMSSSDNEERIRCHFEGKQYLGWKACREKLEDLRKKLS 675 ALLDQLMGRER+VPL +RT R RHF DDDVCKF L GLCPY LF+NTKSDLG+HPN EEDN+D+K Y+A P E+ RY Y+R L+ LE+LV+G DRKVERNR R + EN+ +GI +Q+L++++ I+EKT ESEK+AE+GE+DEAQ L +V +++++K IEK TS K+ KRN+VCEVSGNIMSS+DNEERI CHF+GKQYLGWKACREK+++LR+K S Sbjct: 6 ALLDQLMGRERDVPLDKRTNRKRHFTDDDVCKFHLVGLCPYALFNNTKSDLGEHPNGEEDNDDMKEMYEARPLEERERYGYERQLLRCLEELVAGVDRKVERNRERCNLENSGSGIPEDALQELLKLEVGIKEKTEESEKLAEDGEIDEAQARLEEVASMQQKKNSIEKQYTSIKTVKRNIVCEVSGNIMSSADNEERIMCHFQGKQYLGWKACREKVKELREKFS 231
BLAST of mRNA_P-wetherbeei_contig12900.1.1 vs. uniprot
Match: A0A7S3UYV8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYV8_HETAK) HSP 1 Score: 201 bits (512), Expect = 7.590e-58 Identity = 103/222 (46.40%), Postives = 156/222 (70.27%), Query Frame = 1 Query: 4 LLDQLMGRERNVPLSQRTGRGRHFNDDDVCKFFLAGLCPYVLFSNTKSDLGDHPNREEDNEDLKAAYDALPEAEKSRYTYDRDLMAFLEDLVSGCDRKVERNRVRVDAENADAGIDNAKVQQLVEIDKQIREKTAESEKVAEEGEVDEAQQLLTQVEALRREKAMIEKSATSKSAKRNVVCEVSGNIMSSSDNEERIRCHFEGKQYLGWKACREKLEDLRKK 669 +LDQLMG+ RNV L + + RHF+D DVCKF L GLCPY +F NT+SDLG HP EED++ K YD L ++EK RY Y+++L+ FL LV CD+++E + R D + +V+++ +++Q+ + TA+SE +AEEGE+DEAQ+L+ +VE L+ +K I + + KR +VC++SGN+MSS+DN+ERI HF+GK Y+GWKA R+K+ ++ ++ Sbjct: 23 MLDQLMGKARNVNLGEEV-KARHFSDPDVCKFHLCGLCPYEMFKNTRSDLGGHPEDEEDDDKCKEEYDKLSDSEKRRYGYEKNLLEFLRRLVRQCDQRIESQKAR----QLDTTVSQEEVERIAALERQMADLTAKSEALAEEGEIDEAQKLIEEVERLKIQKEAIANAPMRE--KRMIVCDISGNLMSSTDNDERIDAHFQGKLYIGWKAVRDKVAEIEER 237
BLAST of mRNA_P-wetherbeei_contig12900.1.1 vs. uniprot
Match: A0A7R9UBH9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBH9_9STRA) HSP 1 Score: 196 bits (498), Expect = 4.140e-57 Identity = 107/227 (47.14%), Postives = 156/227 (68.72%), Query Frame = 1 Query: 4 LLDQLMGRERNVPLSQRTGRGRHFNDDDVCKFFLAGLCPYVLFSNTKSDLGDHPNREEDNEDLKAAYDALPEAEKSRYTYDRDLMAFLEDLVSGCDRKVERNRVRVDAENADAGIDNAKVQQLVEIDKQIREKTAESEKVAEEGEVDEAQQLLTQVEALR--REKAMIEKSATSKSAKRNVVCEVSGNIMSSSDNEERIRCHFEGKQYLGWKACREKLEDLRKKLSV 678 LL+QLMG++RN+P+SQ+ R RHF+D DVCK FL GLCP+ LF+NTKSDLG H EED+ +++ + AL E+ RY Y R L+ LED+++GCDRK+ERNR RV E +A A++ ++ +D+Q+ + +E +A+E +V+ A +L +V L+ REK + SK R VVC+V GN M+S+D +R+RCHF G+QY GWK CREK+++LR+ L + Sbjct: 24 LLNQLMGKDRNLPVSQQ--RKRHFSDRDVCKHFLCGLCPFELFTNTKSDLGPHAYNEEDDPEMRKQFQALDVQEQLRYGYHRALLRLLEDMIAGCDRKIERNRERVIREEREAVPTPAEIDDVLAVDRQVEDFVDSAEALAKELDVEAAWDMLGEVHKLQLDREKLLTGGDMLSK---RTVVCDVCGNFMTSTDGVDRLRCHFAGRQYQGWKLCREKVKELRELLRL 245
BLAST of mRNA_P-wetherbeei_contig12900.1.1 vs. uniprot
Match: A0A6U1IEU4_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A6U1IEU4_9CHLO) HSP 1 Score: 187 bits (476), Expect = 1.370e-53 Identity = 106/223 (47.53%), Postives = 147/223 (65.92%), Query Frame = 1 Query: 4 LLDQLMGRERNVPLSQRTGRGRHFNDDDVCKFFLAGLCPYVLFSNTKSDLGDHPNREEDNEDLKAAYDALPEAEKSRYTYDRDLMAFLEDLVSGCDRKVERNRVRVDAENADAGIDNAKVQQLVEIDKQIREKTAESEKVAEEGEVDEAQQLLTQVEALRREKAMIEKSATSKSAKRNVVCEVSGNIMSSSDNEERIRCHFEGKQYLGWKACREKLEDLRKKL 672 LLD+LMG+ER+VPL +RTGR R F+D DVCK L GLCPY LF NT+SDLG +E++KA +DAL E E+SRY Y+ +LM LE L DRK++R + R + E+ + +A L E+D +++E ++E++ EEG+VD AQ Q EA ++K + AT + + VC++ G M+S+DNE R R H GKQYLGWKA REKL++L+KKL Sbjct: 23 LLDELMGKERDVPLERRTGRARRFDDPDVCKHDLCGLCPYSLFKNTRSDLGVCKWEFHGDEEVKAEWDALEERERSRYPYEHELMGVLEQLTREMDRKIQRAKDRAEKESQPRPLSDADKVALDELDTKMKEALEKAEQLGEEGDVDGAQVFSQQAEAFAKQKESKHRQAT-QPERTMTVCDICGVFMNSTDNEARRRDHLSGKQYLGWKAIREKLDELQKKL 244
BLAST of mRNA_P-wetherbeei_contig12900.1.1 vs. uniprot
Match: D7G2B3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B3_ECTSI) HSP 1 Score: 186 bits (473), Expect = 6.180e-53 Identity = 105/236 (44.49%), Postives = 150/236 (63.56%), Query Frame = 1 Query: 1 ALLDQLMGRERNVPLSQRTGRGRHFNDDDVCKFFLAGLCPYVLFSNTKSDLGDHPNREEDNEDLKAAYDALPEAEKSRYTYDRDLMAFLEDLVSGCDRKVERNRVRVDAENADAGIDNAKVQQLVEIDKQIREKTA-----ESEKVAEEGEVDEAQQLLTQVEALRREKAMIEKSATSKSAKRNVVCEVSGNIM-------SSSDNEERIRCHFEGKQYLGWKACREKLEDLRKKL 672 ALL+QLMGRER++P+ +RT R R DDD+CK +L GLCPYV F NT+SDLG+HP ++ + D+KA +D L E EK +Y Y+R+LM +L DLV CDR+VE+N+ R+ E D + ++++ +L+++++ + EK M EK+ SK R++VCEVSGNIM SS++NEERIRCHF+GKQYLGWKA R+KL++L++K Sbjct: 6 ALLEQLMGRERDIPVDKRTNRSRKIWDDDICKPYLCGLCPYVDFRNTRSDLGEHPPNQDHDPDVKAQWDKLSEDEKDKYGYERELMTYLMDLVVTCDRRVEKNKERLRLEQGDDNVKDSQIARLIDMERVMSEKMELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAEKNENSK---RDIVCEVSGNIMLVSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEKF 238
BLAST of mRNA_P-wetherbeei_contig12900.1.1 vs. uniprot
Match: A0A7S1CQQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQQ5_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.400e-50 Identity = 100/225 (44.44%), Postives = 148/225 (65.78%), Query Frame = 1 Query: 4 LLDQLMGRERNVPLSQRTGRGRHFNDDDVCKFFLAGLCPYVLFSNTKSDLGDHPNREEDNEDLKAAYDALPEAEKSRYTYDRDLMAFLEDLVSGCDRKVERNRVRVDAENADAGIDNAKVQQLVEIDKQIREKTAESEKVAEEGEVDEAQQLLTQVEALRREKAMIEKSATSKSAKRNVVCEVSGNIMSSSDNEERIRCHFEGKQYLGWKACREK----LEDLRK 666 LLD+LMG+ER+VP+ RT + RHF DDDVCK FL G+CP+ L NTKSDLG H +D KA +D L AE+ +Y YD + L+ LV CDR+V RN R+ + A + + + +++V+++ ++ E + ++E + EEG+VDEA+ L ++E L+R K IE A K +VC++SGN +SS+D+E+R+R HFEG+ Y+G+K RE LE+LRK Sbjct: 53 LLDELMGKERDVPVHLRTNKKRHFYDDDVCKHFLVGICPFALLKNTKSDLGTHDLAHDDK--CKAEWDKLSPAEQQKYGYDIETARLLDQLVHDCDRRVARNEARIGEQGA-VRLTDEEAKRMVDMEVEMSELSKQAESLGEEGKVDEAEAALARIEELKRTKQAIE-MARGGGEKTMMVCKISGNYLSSTDSEDRLRAHFEGRLYIGFKTIRETHQKMLEELRK 273
BLAST of mRNA_P-wetherbeei_contig12900.1.1 vs. uniprot
Match: A0A061R874_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R874_9CHLO) HSP 1 Score: 179 bits (454), Expect = 3.320e-50 Identity = 105/229 (45.85%), Postives = 147/229 (64.19%), Query Frame = 1 Query: 1 ALLDQLMGRERNVPLSQRTGRGRHFNDDDVCKFFLAGLCPYVLFSNTKSDLGDHPNREEDNEDLKAAYDALPEAEKSRYTYDRDLMAFLEDLVSGCDRKVERNRVRVDAENADAGIDNAKVQQLVEIDKQIREKTAESEKVAEEGEVDEAQQLLTQVEALRREKAMIEKSATSKSAKRNVVCEVSGNIMSSSDNEERIRCHFEGKQYLGWKACREKLEDLRKKLS-VPS 684 ALLD+LMG+ER+VPL RT + R F+D+D+CK+ L GLCPY LF NT+SDLG +E +K + L E EK+RY Y+ +LM LE LV DRK+ R + R + E+A + A + L ++D +++E ++EK+ EEG+VD AQ Q E+L ++K + T +V CEV G ++S+DNE R R H GKQYLGWKA REKL +L+KKL+ VP+ Sbjct: 26 ALLDELMGKERDVPLDVRTNKARRFDDEDICKYDLCGLCPYSLFKNTRSDLGICKWEVHGDEQVKEQWSKLEEKEKARYPYEHELMTELEQLVREMDRKIARAKDRAEKESAPRPLSEADKKALDDLDAKMKEALEKAEKLGEEGDVDGAQVFSQQAESLAKQKETQYRQLTQPERTMSV-CEVCGVFINSTDNEARRRDHLAGKQYLGWKAIREKLAELQKKLAGVPA 253
BLAST of mRNA_P-wetherbeei_contig12900.1.1 vs. uniprot
Match: A0A061RUV9_9CHLO (Luc7-like protein 3-like (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RUV9_9CHLO) HSP 1 Score: 171 bits (432), Expect = 2.650e-46 Identity = 99/219 (45.21%), Postives = 138/219 (63.01%), Query Frame = 1 Query: 1 ALLDQLMGRERNVPLSQRTGRGRHFNDDDVCKFFLAGLCPYVLFSNTKSDLGDHPNREEDNEDLKAAYDALPEAEKSRYTYDRDLMAFLEDLVSGCDRKVERNRVRVDAENADAGIDNAKVQQLVEIDKQIREKTAESEKVAEEGEVDEAQQLLTQVEALRREKAMIEKSATSKSAKRNVVCEVSGNIMSSSDNEERIRCHFEGKQYLGWKACREKLED 657 ALLD+LMG+ER+VPL RT + R F+D+D+CK+ L GLCPY LF NT+SDLG +E +K + L E EK+RY Y+ +LM LE LV DRK+ R + R + E+A + A + L ++D +++E ++EK+ EEG+VD AQ Q E+L ++K + T +V CEV G ++S+DNE R R H GKQYLGWKA REKL + Sbjct: 18 ALLDELMGKERDVPLDVRTNKARRFDDEDICKYDLCGLCPYSLFKNTRSDLGICKWEVHGDEQVKEQWSKLEEKEKARYPYEHELMTELEQLVREMDRKIARAKDRAEKESAPRPLSEADKKALDDLDAKMKEALEKAEKLGEEGDVDGAQVFSQQAESLAKQKETQYRQLTQPERTMSV-CEVCGVFINSTDNEARRRDHLAGKQYLGWKAIREKLAE 235
BLAST of mRNA_P-wetherbeei_contig12900.1.1 vs. uniprot
Match: A0A7S0DK89_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DK89_9EUKA) HSP 1 Score: 168 bits (426), Expect = 3.790e-46 Identity = 98/228 (42.98%), Postives = 145/228 (63.60%), Query Frame = 1 Query: 1 ALLDQLMGRERNVPLSQRTGRGRHFNDDDVCKFFLAGLCPYVLFSNTKSDLGDHPNREEDNEDLKAAYDALPEAEKSRYTYDRDLMAFLEDLVSGCDRKVERNRVRVDAE----NADAGIDNAKVQQLVEIDKQIREKTAESEKVAEEGEVDEAQQLLTQVEALRREKAMIEKSATS--KSAKRNVVCEVSGNIMSSSDNEERIRCHFEGKQYLGWKACREKLEDLRK 666 ALLDQLMG+ERN +R RHF DDDVCK+FL GLCPY LF NTKSDLG++ + K+ YDALP+ EK +Y Y DL L+ L+ CDRK++RN+ R +A+ N ++ + ++L +I +I + + E+E+ EEG++++A+ L +VE LR E I K + ++ +VCEVSG +MS++D+E R++ + GKQY GWK R+ +L+K Sbjct: 25 ALLDQLMGKERNASFEEREKMQRHFWDDDVCKYFLVGLCPYDLFKNTKSDLGEYDKVFDLR--AKSEYDALPQEEKDKYPYQWDLFDLLKRLIDECDRKIQRNKERCEADERLKNEPKKLNEEEAKRLGQIQDEISKLSKEAEEAGEEGKIEQAKILTMRVEGLRGEAEQIMKKPEDIRLNTRQLMVCEVSGVLMSTTDSESRLKSLYSGKQYQGWKKVRDFYAELQK 250
BLAST of mRNA_P-wetherbeei_contig12900.1.1 vs. uniprot
Match: A0A7S2D4R8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D4R8_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.520e-45 Identity = 98/238 (41.18%), Postives = 151/238 (63.45%), Query Frame = 1 Query: 4 LLDQLMGRERNVPLSQRTGRGRHFNDDDVCKFFLAGLCPYVLFSNTKSDLGDHPNREEDNEDLKAAYDALPEAEKSRYTYDRDLMAFLEDLVSGCDRKVERNRVRV------DAENADAGIDNAKVQQLVEIDKQIREKTAESEKVAEEGEVDEAQQLLTQVEALRREKAMIEKSATSKSA-----KRNVVCEVSGNIMSSSDNEERIRCHFEGKQYLGWKACREKLEDLRKKLSVPS 684 LLD+LMG+ERN+ ++ R RHF+D DVCK+++ GL PY LF NTKSDLG + +D D + ++A+P+ EK +Y Y+ +LM LE LVS CD KV+R+ R+ + E + ++++L I+ +IR E+E++ E G V+++ + + ++ RRE+ +E A + S K +VC VSGN M+++DN +R+RCHFEGKQY GWK R+KL +LR ++ PS Sbjct: 10 LLDELMGQERNMNEEEKLNRKRHFSDPDVCKYYICGLSPYNLFKNTKSDLGPYDKVFDD--DSRKQWEAMPQEEKFKYGYEYELMVLLERLVSQCDAKVKRHSERIRQEQQAELEAVQTVLSEDEMKRLAVIEDEIRGAEKEAEELGESGLVEKSIGAIQKADSARREQLGLEAKAATLSREEAGRKHMIVCVVSGNFMNATDNGDRLRCHFEGKQYQGWKRIRDKLAELRA-MNPPS 244 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12900.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12900.1.1 >prot_P-wetherbeei_contig12900.1.1 ID=prot_P-wetherbeei_contig12900.1.1|Name=mRNA_P-wetherbeei_contig12900.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=233bp MGRERNVPLSQRTGRGRHFNDDDVCKFFLAGLCPYVLFSNTKSDLGDHPNback to top mRNA from alignment at P-wetherbeei_contig12900:2..1484- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12900.1.1 ID=mRNA_P-wetherbeei_contig12900.1.1|Name=mRNA_P-wetherbeei_contig12900.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1483bp|location=Sequence derived from alignment at P-wetherbeei_contig12900:2..1484- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12900:2..1484- >mRNA_P-wetherbeei_contig12900.1.1 ID=mRNA_P-wetherbeei_contig12900.1.1|Name=mRNA_P-wetherbeei_contig12900.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=699bp|location=Sequence derived from alignment at P-wetherbeei_contig12900:2..1484- (Phaeothamnion wetherbeei SAG_119_79)back to top |