mRNA_P-wetherbeei_contig12882.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12882.2.1
Unique NamemRNA_P-wetherbeei_contig12882.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: A0A3C0TYL4_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYL4_9PROT)

HSP 1 Score: 301 bits (770), Expect = 1.920e-99
Identity = 167/258 (64.73%), Postives = 202/258 (78.29%), Query Frame = 1
Query:    1 LEAYLVTWMISEIVPCLVLIGMAVRELRRQGVLA-PHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLRRHAVTA 771
            L AYL+ W ++ ++P LVLI M +RELRR GVLA P      +   WA DRKVWGFVWS NLN++LQL  +HFGTLAVGA+LGA +AALYR+ARQL+EALT PVKLLTP+IYPELARL+AR AIA+MRRF+ RA+LLAGV AS +V +LI AGP LL  +AGP    AYGVM VLG AAA+RL +FPLEPMLISSG A SAL++R+ +T  Y+ L+F LC  LGLVGAG+ALL+A+L NL GQ+FV EK LR +A  A
Sbjct:   35 LGAYLLVWGLANVLPQLVLILMCLRELRRHGVLAAPSATGPESSSVWAADRKVWGFVWSTNLNSSLQLTFSHFGTLAVGALLGAGSAALYRVARQLSEALTAPVKLLTPSIYPELARLSARKAIAEMRRFILRASLLAGVVASLMVAILIFAGPLLLNLIAGPKLTAAYGVMCVLGAAAALRLSAFPLEPMLISSGLAGSALRIRIGSTLAYLVLLFLLCPLLGLVGAGIALLLATLVNLAGQVFVTEKLLRTNAPAA 292          
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: A0A2N3BXY5_9PROT (Teichoic acid transporter n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-3 TaxID=2013666 RepID=A0A2N3BXY5_9PROT)

HSP 1 Score: 276 bits (705), Expect = 2.260e-87
Identity = 148/253 (58.50%), Postives = 185/253 (73.12%), Query Frame = 1
Query:    1 LEAYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLRRH 759
            LE YL+ W  + ++    LIGMA+RELRR+ +L    E  A P  W P RKVW FVWS N NTTL L  THFGTLAVGA+LGAPAAALYR+ RQL EA+T P KLLTP IYPELARLAARN I  +R F+ R+AL+AG+GA+ LVG L   G WLL  VAGP++  AYGVMV+LG+AAA+RL +FPL+P+LIS+ +A + L V  V+T +Y+AL+F LC   GL GAG+A L A++ N+ G + + EKWLRR 
Sbjct:  202 LEIYLLVWFTATLISGSTLIGMALRELRRRNIL--QAEADALPAVWRPTRKVWRFVWSTNFNTTLGLASTHFGTLAVGALLGAPAAALYRVGRQLAEAVTVPTKLLTPAIYPELARLAARNEIVRIRSFVFRSALMAGMGATVLVGGLAAIGAWLLNAVAGPDYVAAYGVMVLLGVAAAVRLWAFPLQPLLISANRAHAVLAVHGVSTGVYLALLFPLCLSAGLAGAGIATLTANVLNIAGLLILAEKWLRRQ 452          
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: A0A2N3EEN9_9PROT (Teichoic acid transporter n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3EEN9_9PROT)

HSP 1 Score: 265 bits (678), Expect = 2.730e-83
Identity = 146/256 (57.03%), Postives = 181/256 (70.70%), Query Frame = 1
Query:    4 EAYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLRRHAVTA 771
            E YL+ W  + +V    LIGM +RELRR+ VL    E  A+P  W P R VW FVWS N NTTL L  THFGTLAVGA+L   AAALYR+  QL EA+T P KLLTP IYPELARLAA+  I  +R FM RAAL+AG+GA+ LVG L   G WLL  +AGP +  AYGVMV LG+AAAIRL +FPLEPMLIS+ +A + L VR+V+TA+Y+ L+F LC   GL+GAG+A L+A+  N+ G + +VE+WLR   + A
Sbjct:  205 ETYLLVWFTATLVSGSTLIGMTLRELRRRNVL--QAETQASPAVWRPTRDVWRFVWSTNFNTTLGLAFTHFGTLAVGALLSPSAAALYRVGHQLAEAVTVPTKLLTPAIYPELARLAAKREIVRIRIFMFRAALMAGMGATTLVGGLAAIGTWLLGAIAGPEYIAAYGVMVFLGVAAAIRLWAFPLEPMLISADRAHAVLAVRVVSTAVYLGLLFPLCLSAGLLGAGIATLVANTINIAGLLVLVERWLRLQRMPA 458          
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: UPI0013C4FA89 (lipopolysaccharide biosynthesis protein n=1 Tax=Indioceanicola profundi TaxID=2220096 RepID=UPI0013C4FA89)

HSP 1 Score: 196 bits (499), Expect = 1.330e-56
Identity = 121/251 (48.21%), Postives = 159/251 (63.35%), Query Frame = 1
Query:    1 LEAYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLR 753
            LE +LV W     V  + LIG   +ELRR+G L     +        P   +WGFVW+ NLNTTL+L  TH GTLAVG +LG   AAL+RIARQ  +A+  P KLL P IYPELARLAA N    MR  + R+ALLAG   +A++G++ + G  LLR   GP F  AY VM+ L   + I + +FPLEP+LIS+G A +ALKVR+ +TALY+ L+ +L   +GL+GAG+A L ASL  L+  +  V +W R
Sbjct:  202 LEWFLVAWYAGTAVAGIYLIGAGWQELRRRGHLDEWAWRGGGLTAGFPG--IWGFVWTTNLNTTLELAFTHMGTLAVGWILGPAEAALFRIARQFADAIAKPAKLLIPAIYPELARLAAGNEFGTMRNLIQRSALLAGGLGTAMLGLVWLLGEPLLRLTVGPEFTAAYPVMIWLVAGSVISIWAFPLEPLLISTGHAGTALKVRVWSTALYVPLLLWLLDRMGLLGAGIAALAASLFILLALLVPVVRWFR 450          
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: B6IRT9_RHOCS (Inner membrane protein YghQ, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) TaxID=414684 RepID=B6IRT9_RHOCS)

HSP 1 Score: 196 bits (497), Expect = 2.450e-56
Identity = 118/252 (46.83%), Postives = 156/252 (61.90%), Query Frame = 1
Query:    1 LEAYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLRR 756
            L A+LV W ++     + LI    REL R G+LA    +        P   +WGFVW+ NLNTTL+L  TH GTLA GA LG   AAL+RIARQ  +AL  P KLL P IYPELARL A   +A +RR M R+ALLAG+ A+A++  + + G W+LR + G  F  A+ VM+ L   A + + +FPLEP+LIS+G A +AL+VR+ +TALY+ L+  L    GL+GAG A L ASL   V  +  V +W  R
Sbjct:  196 LGAFLVAWYLATAAAGIFLIAAGWRELSRGGLLAGWRWRGGGLTAGFPG--IWGFVWTTNLNTTLELAFTHMGTLAAGAFLGTREAALFRIARQFADALAKPAKLLVPAIYPELARLYAAGDVASIRRLMQRSALLAGLVATAMMAAVWLLGEWVLRVIVGAEFVAAFPVMLWLVAGAVVGIWAFPLEPLLISTGHAGAALRVRLWSTALYVPLLLLLLDTAGLIGAGWAALAASLFIFVALLLPVIRWFDR 445          
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: UPI00138FA8A3 (lipopolysaccharide biosynthesis protein n=1 Tax=Oleisolibacter albus TaxID=2171757 RepID=UPI00138FA8A3)

HSP 1 Score: 186 bits (472), Expect = 1.220e-52
Identity = 115/255 (45.10%), Postives = 154/255 (60.39%), Query Frame = 1
Query:    1 LEAYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLRRHAV 765
            L A+L  W ++ +V  L LI    RELR +G+L     +   P+       +W FVWS NLN+TL+L  TH GTL VG M+G+  A L+R+ARQ+ + +  P KLL P IYPELARLAA    A MR  + R+AL+AG GA+AL+ V  + G  LL  V GP F  AYGVM+ L  AA + + SFPLEPMLIS+GQA +A ++R  T+ALY+  +F      GL GAG   L  ++      +  V +W R+ AV
Sbjct:  198 LVAFLAAWYLATVVAGLFLIAAGWRELRTRGLLEGFRWRGEGPMTHGFPG-IWSFVWSTNLNSTLELAFTHVGTLVVGWMMGSTEAGLFRVARQVADGVAKPAKLLVPAIYPELARLAAAGDRASMRHLIERSALIAGAGATALMLVAALLGKPLLSLVLGPEFVSAYGVMLWLIAAAVVGIWSFPLEPMLISNGQAGTATRIRAWTSALYIPALFLALDHAGLAGAGWVRLAVAVLMFAAFLRPVLRWFRQPAV 451          
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: A0A858R4Z0_9PROT (Lipopolysaccharide biosynthesis protein n=1 Tax=Rhodospirillaceae bacterium B3 TaxID=2728875 RepID=A0A858R4Z0_9PROT)

HSP 1 Score: 182 bits (461), Expect = 3.950e-51
Identity = 113/257 (43.97%), Postives = 158/257 (61.48%), Query Frame = 1
Query:    1 LEAYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLRRHAVTA 771
            +E +L  W ++ +V  + LI    +EL+ +G+L     +     +      +W FV+S NLN TL+L  TH GTL VG  LG   AAL+R+ARQ+ EAL  P KLL P IYPELARL+A      MR    R+ALLAG GAS  +G++ +AG WLL  V GP+F PAY VM+ L  AA + + +FPLEP+LISSG+A +AL+ R+ ++A+Y+ ++F      GL+GAG A L AS+      +  V +W R  A+ A
Sbjct:  175 IEWFLAAWYLATVVAGVYLIHAGWKELKVRGLLDGFRWRGGGLTRGFDG--IWKFVFSTNLNATLELAFTHIGTLVVGWYLGPKDAALFRVARQVGEALAKPAKLLVPAIYPELARLSAAGEHKTMRDLALRSALLAGAGASLGLGLVWLAGEWLLGLVLGPDFIPAYPVMIWLVAAAVVGIWAFPLEPVLISSGEAGAALRARIWSSAVYLPVLFLAVQSYGLIGAGWARLFASVVVFAAFLLPVIRWFRGQALPA 429          
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: A0A2K9N9R4_9PROT (Teichoic acid transporter n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2K9N9R4_9PROT)

HSP 1 Score: 180 bits (457), Expect = 2.440e-50
Identity = 112/259 (43.24%), Postives = 153/259 (59.07%), Query Frame = 1
Query:    7 AYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRK--------VWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLRRH 759
            A+LV W I+  V  + LI     ELR++G+L  +         W  D K        VW FVWS NL++TL+L  TH GTLAVG MLG   AAL+RIARQL EAL  P KLL P IYPEL+R+       +MR  + R+ALLAG GA   + +    G   LR + G  F PA+ VM+ L  AA + + SFPLEP+++S+G+A  AL VR+ TTA+Y+ ++     W GL+GAG A + +++  LV  +  V +W R+ 
Sbjct:  207 AFLVAWYIATAVAGIYLIAKGWSELRKRGLLDGY--------SWRGDGKPMSHGFDGVWSFVWSTNLSSTLELAYTHIGTLAVGWMLGPRDAALFRIARQLGEALAKPAKLLIPAIYPELSRMIEARQFGEMRSLIQRSALLAGAGAMLALVICWFIGEIGLRLIVGEEFVPAWPVMMWLVAAAVVGIWSFPLEPVMVSAGEAHKALMVRIWTTAVYIPILLACIHWFGLIGAGWARMFSAILVLVAFLVPVVRWFRQR 457          
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: A0A5M6I828_9PROT (Lipopolysaccharide biosynthesis protein n=2 Tax=Roseospira marina TaxID=140057 RepID=A0A5M6I828_9PROT)

HSP 1 Score: 180 bits (456), Expect = 3.350e-50
Identity = 111/249 (44.58%), Postives = 152/249 (61.04%), Query Frame = 1
Query:   10 YLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPD-RKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLR 753
            +LV W +   V  L L   A RE++ +G+L         P  W  D  ++W FVWS NLN +L L+  H  TLAVG +LG   AAL+R+ARQ+  AL+ P KLL P IYPELA+L+   AI  MR  + RAALLAG GAS  + V  + G WLL  V GP+F  AY VM+ L  A  + + +FPLEP+LIS G+A +AL+ R+ ++ALY+ ++  L    GL+GAG A L A++  L+  +  V +W R
Sbjct:  215 FLVAWYLGTTVAGLSLFYAAWREVKGRGLLDGF-RWWGGP--WTADFPRIWSFVWSTNLNASLGLISNHLSTLAVGGLLGPSDAALFRVARQVGTALSKPAKLLVPAIYPELAKLSTEGAIQTMRSLVGRAALLAGAGASLSLLVAWLGGEWLLGLVLGPDFVAAYPVMLWLVAAGVVSIAAFPLEPVLISGGEAGTALRARLWSSALYIPVLLLLVHQFGLIGAGWARLFATVITLIAFLLPVLRWFR 460          
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: UPI00190403AE (lipopolysaccharide biosynthesis protein n=1 Tax=Azospirillum sp. YIM B02556 TaxID=2800326 RepID=UPI00190403AE)

HSP 1 Score: 179 bits (453), Expect = 6.780e-50
Identity = 114/251 (45.42%), Postives = 149/251 (59.36%), Query Frame = 1
Query:    1 LEAYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLR 753
            LE +L  W +      L L  +  REL+R+G+L  +  +  A     P   +WGFVWS NL  TL+LV TH  TL VG +LGA  AAL+R+ARQ+ EALT P KLL P IYPELARL A      MR  + R+AL+AGVG    + +    G WLL  V GP+F  AY VM+ L  AAA+ + +FPLEP+LIS G+A +AL  R+ + ALY+ ++       GLVGAG A L A+    V  +  V +W R
Sbjct:  197 LEWFLAVWYLGTAAAGLHLFHVGRRELKRRGLLDGYRWRGGAWTAGFPG--IWGFVWSTNLGITLELVFTHISTLVVGGLLGAADAALFRVARQIGEALTKPAKLLVPAIYPELARLCADGEHHVMRALIQRSALIAGVGGVLSLVLAWGGGDWLLGAVLGPDFVAAYPVMLWLVAAAAVSVAAFPLEPVLISGGEAGAALHARLWSAALYLPVLLLSVQHWGLVGAGWARLFAAALTGVAFLIPVLRWFR 445          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TYL4_9PROT1.920e-9964.73Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A2N3BXY5_9PROT2.260e-8758.50Teichoic acid transporter n=1 Tax=Alphaproteobacte... [more]
A0A2N3EEN9_9PROT2.730e-8357.03Teichoic acid transporter n=1 Tax=Alphaproteobacte... [more]
UPI0013C4FA891.330e-5648.21lipopolysaccharide biosynthesis protein n=1 Tax=In... [more]
B6IRT9_RHOCS2.450e-5646.83Inner membrane protein YghQ, putative n=1 Tax=Rhod... [more]
UPI00138FA8A31.220e-5245.10lipopolysaccharide biosynthesis protein n=1 Tax=Ol... [more]
A0A858R4Z0_9PROT3.950e-5143.97Lipopolysaccharide biosynthesis protein n=1 Tax=Rh... [more]
A0A2K9N9R4_9PROT2.440e-5043.24Teichoic acid transporter n=5 Tax=Alphaproteobacte... [more]
A0A5M6I828_9PROT3.350e-5044.58Lipopolysaccharide biosynthesis protein n=2 Tax=Ro... [more]
UPI00190403AE6.780e-5045.42lipopolysaccharide biosynthesis protein n=1 Tax=Az... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12882contigP-wetherbeei_contig12882:1149..1922 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog414684.RC1_0744
PFAMsPolysacc_synt,Polysacc_synt_3
Model size774
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1e-54
EggNOG OGsCOG2244@1|root,COG2244@2|Bacteria,1RDQG@1224|Proteobacteria,2U27A@28211|Alphaproteobacteria,2JVP9@204441|Rhodospirillales
DescriptionPFAM polysaccharide biosynthesis protein
Cds size750
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185964.9691017-CDS-P-wetherbeei_contig12882:1148..18981683185964.9691017-CDS-P-wetherbeei_contig12882:1148..1898Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12882 1149..1898 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185964.9777863-UTR-P-wetherbeei_contig12882:1898..19221683185964.9777863-UTR-P-wetherbeei_contig12882:1898..1922Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12882 1899..1922 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12882.2.1prot_P-wetherbeei_contig12882.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12882 1149..1898 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12882.2.1

>prot_P-wetherbeei_contig12882.2.1 ID=prot_P-wetherbeei_contig12882.2.1|Name=mRNA_P-wetherbeei_contig12882.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=250bp
MISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWS
ANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTP
TIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRT
VAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTT
ALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLRRHAVTA*
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mRNA from alignment at P-wetherbeei_contig12882:1149..1922-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12882.2.1 ID=mRNA_P-wetherbeei_contig12882.2.1|Name=mRNA_P-wetherbeei_contig12882.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=774bp|location=Sequence derived from alignment at P-wetherbeei_contig12882:1149..1922- (Phaeothamnion wetherbeei SAG_119_79)
CTGGAAGCCTATCTGGTCACCTGGATGATCTCCGAGATTGTTCCCTGCCT GGTATTAATAGGCATGGCCGTGCGTGAGTTGCGCCGGCAGGGTGTACTGG CTCCACACCCGGAACAGACCGCTGCACCCGTTCAATGGGCGCCGGATCGC AAGGTTTGGGGCTTTGTGTGGTCTGCCAATCTGAATACCACTTTGCAGCT TGTCCTGACCCATTTTGGGACGCTTGCGGTTGGGGCGATGCTTGGGGCGC CTGCCGCAGCACTTTACCGGATTGCCCGGCAATTGACCGAAGCCCTCACC ACGCCCGTTAAGCTGCTGACGCCAACCATTTATCCCGAACTGGCCCGGCT TGCCGCCCGTAACGCCATTGCGGATATGCGGCGCTTTATGGCGCGCGCAG CGCTACTTGCTGGGGTGGGGGCAAGTGCGCTTGTAGGGGTGCTGATTGTG GCGGGGCCATGGCTGTTAAGGACTGTGGCGGGGCCAAATTTTGCACCCGC TTATGGGGTTATGGTAGTGTTGGGAATTGCCGCCGCGATCCGCCTTGGGT CTTTTCCGCTGGAGCCAATGCTGATATCTTCCGGCCAGGCATTGTCGGCC CTGAAGGTGCGCATGGTGACGACGGCGTTATACATGGCGCTAATGTTCTT TTTATGTTCCTGGTTGGGGCTGGTGGGTGCGGGGCTTGCGCTGCTGATTG CATCGCTGACCAATCTTGTTGGTCAGATTTTTGTTGTGGAAAAATGGCTT CGTCGGCATGCCGTGACAGCGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12882:1149..1922-

>mRNA_P-wetherbeei_contig12882.2.1 ID=mRNA_P-wetherbeei_contig12882.2.1|Name=mRNA_P-wetherbeei_contig12882.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=750bp|location=Sequence derived from alignment at P-wetherbeei_contig12882:1149..1922- (Phaeothamnion wetherbeei SAG_119_79)
ATGATCTCCGAGATTGTTCCCTGCCTGGTATTAATAGGCATGGCCGTGCG
TGAGTTGCGCCGGCAGGGTGTACTGGCTCCACACCCGGAACAGACCGCTG
CACCCGTTCAATGGGCGCCGGATCGCAAGGTTTGGGGCTTTGTGTGGTCT
GCCAATCTGAATACCACTTTGCAGCTTGTCCTGACCCATTTTGGGACGCT
TGCGGTTGGGGCGATGCTTGGGGCGCCTGCCGCAGCACTTTACCGGATTG
CCCGGCAATTGACCGAAGCCCTCACCACGCCCGTTAAGCTGCTGACGCCA
ACCATTTATCCCGAACTGGCCCGGCTTGCCGCCCGTAACGCCATTGCGGA
TATGCGGCGCTTTATGGCGCGCGCAGCGCTACTTGCTGGGGTGGGGGCAA
GTGCGCTTGTAGGGGTGCTGATTGTGGCGGGGCCATGGCTGTTAAGGACT
GTGGCGGGGCCAAATTTTGCACCCGCTTATGGGGTTATGGTAGTGTTGGG
AATTGCCGCCGCGATCCGCCTTGGGTCTTTTCCGCTGGAGCCAATGCTGA
TATCTTCCGGCCAGGCATTGTCGGCCCTGAAGGTGCGCATGGTGACGACG
GCGTTATACATGGCGCTAATGTTCTTTTTATGTTCCTGGTTGGGGCTGGT
GGGTGCGGGGCTTGCGCTGCTGATTGCATCGCTGACCAATCTTGTTGGTC
AGATTTTTGTTGTGGAAAAATGGCTTCGTCGGCATGCCGTGACAGCGTAA
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