mRNA_P-wetherbeei_contig12882.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: A0A3C0TYL4_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYL4_9PROT) HSP 1 Score: 301 bits (770), Expect = 1.920e-99 Identity = 167/258 (64.73%), Postives = 202/258 (78.29%), Query Frame = 1 Query: 1 LEAYLVTWMISEIVPCLVLIGMAVRELRRQGVLA-PHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLRRHAVTA 771 L AYL+ W ++ ++P LVLI M +RELRR GVLA P + WA DRKVWGFVWS NLN++LQL +HFGTLAVGA+LGA +AALYR+ARQL+EALT PVKLLTP+IYPELARL+AR AIA+MRRF+ RA+LLAGV AS +V +LI AGP LL +AGP AYGVM VLG AAA+RL +FPLEPMLISSG A SAL++R+ +T Y+ L+F LC LGLVGAG+ALL+A+L NL GQ+FV EK LR +A A Sbjct: 35 LGAYLLVWGLANVLPQLVLILMCLRELRRHGVLAAPSATGPESSSVWAADRKVWGFVWSTNLNSSLQLTFSHFGTLAVGALLGAGSAALYRVARQLSEALTAPVKLLTPSIYPELARLSARKAIAEMRRFILRASLLAGVVASLMVAILIFAGPLLLNLIAGPKLTAAYGVMCVLGAAAALRLSAFPLEPMLISSGLAGSALRIRIGSTLAYLVLLFLLCPLLGLVGAGIALLLATLVNLAGQVFVTEKLLRTNAPAA 292
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: A0A2N3BXY5_9PROT (Teichoic acid transporter n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-3 TaxID=2013666 RepID=A0A2N3BXY5_9PROT) HSP 1 Score: 276 bits (705), Expect = 2.260e-87 Identity = 148/253 (58.50%), Postives = 185/253 (73.12%), Query Frame = 1 Query: 1 LEAYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLRRH 759 LE YL+ W + ++ LIGMA+RELRR+ +L E A P W P RKVW FVWS N NTTL L THFGTLAVGA+LGAPAAALYR+ RQL EA+T P KLLTP IYPELARLAARN I +R F+ R+AL+AG+GA+ LVG L G WLL VAGP++ AYGVMV+LG+AAA+RL +FPL+P+LIS+ +A + L V V+T +Y+AL+F LC GL GAG+A L A++ N+ G + + EKWLRR Sbjct: 202 LEIYLLVWFTATLISGSTLIGMALRELRRRNIL--QAEADALPAVWRPTRKVWRFVWSTNFNTTLGLASTHFGTLAVGALLGAPAAALYRVGRQLAEAVTVPTKLLTPAIYPELARLAARNEIVRIRSFVFRSALMAGMGATVLVGGLAAIGAWLLNAVAGPDYVAAYGVMVLLGVAAAVRLWAFPLQPLLISANRAHAVLAVHGVSTGVYLALLFPLCLSAGLAGAGIATLTANVLNIAGLLILAEKWLRRQ 452
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: A0A2N3EEN9_9PROT (Teichoic acid transporter n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3EEN9_9PROT) HSP 1 Score: 265 bits (678), Expect = 2.730e-83 Identity = 146/256 (57.03%), Postives = 181/256 (70.70%), Query Frame = 1 Query: 4 EAYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLRRHAVTA 771 E YL+ W + +V LIGM +RELRR+ VL E A+P W P R VW FVWS N NTTL L THFGTLAVGA+L AAALYR+ QL EA+T P KLLTP IYPELARLAA+ I +R FM RAAL+AG+GA+ LVG L G WLL +AGP + AYGVMV LG+AAAIRL +FPLEPMLIS+ +A + L VR+V+TA+Y+ L+F LC GL+GAG+A L+A+ N+ G + +VE+WLR + A Sbjct: 205 ETYLLVWFTATLVSGSTLIGMTLRELRRRNVL--QAETQASPAVWRPTRDVWRFVWSTNFNTTLGLAFTHFGTLAVGALLSPSAAALYRVGHQLAEAVTVPTKLLTPAIYPELARLAAKREIVRIRIFMFRAALMAGMGATTLVGGLAAIGTWLLGAIAGPEYIAAYGVMVFLGVAAAIRLWAFPLEPMLISADRAHAVLAVRVVSTAVYLGLLFPLCLSAGLLGAGIATLVANTINIAGLLVLVERWLRLQRMPA 458
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: UPI0013C4FA89 (lipopolysaccharide biosynthesis protein n=1 Tax=Indioceanicola profundi TaxID=2220096 RepID=UPI0013C4FA89) HSP 1 Score: 196 bits (499), Expect = 1.330e-56 Identity = 121/251 (48.21%), Postives = 159/251 (63.35%), Query Frame = 1 Query: 1 LEAYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLR 753 LE +LV W V + LIG +ELRR+G L + P +WGFVW+ NLNTTL+L TH GTLAVG +LG AAL+RIARQ +A+ P KLL P IYPELARLAA N MR + R+ALLAG +A++G++ + G LLR GP F AY VM+ L + I + +FPLEP+LIS+G A +ALKVR+ +TALY+ L+ +L +GL+GAG+A L ASL L+ + V +W R Sbjct: 202 LEWFLVAWYAGTAVAGIYLIGAGWQELRRRGHLDEWAWRGGGLTAGFPG--IWGFVWTTNLNTTLELAFTHMGTLAVGWILGPAEAALFRIARQFADAIAKPAKLLIPAIYPELARLAAGNEFGTMRNLIQRSALLAGGLGTAMLGLVWLLGEPLLRLTVGPEFTAAYPVMIWLVAGSVISIWAFPLEPLLISTGHAGTALKVRVWSTALYVPLLLWLLDRMGLLGAGIAALAASLFILLALLVPVVRWFR 450
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: B6IRT9_RHOCS (Inner membrane protein YghQ, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) TaxID=414684 RepID=B6IRT9_RHOCS) HSP 1 Score: 196 bits (497), Expect = 2.450e-56 Identity = 118/252 (46.83%), Postives = 156/252 (61.90%), Query Frame = 1 Query: 1 LEAYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLRR 756 L A+LV W ++ + LI REL R G+LA + P +WGFVW+ NLNTTL+L TH GTLA GA LG AAL+RIARQ +AL P KLL P IYPELARL A +A +RR M R+ALLAG+ A+A++ + + G W+LR + G F A+ VM+ L A + + +FPLEP+LIS+G A +AL+VR+ +TALY+ L+ L GL+GAG A L ASL V + V +W R Sbjct: 196 LGAFLVAWYLATAAAGIFLIAAGWRELSRGGLLAGWRWRGGGLTAGFPG--IWGFVWTTNLNTTLELAFTHMGTLAAGAFLGTREAALFRIARQFADALAKPAKLLVPAIYPELARLYAAGDVASIRRLMQRSALLAGLVATAMMAAVWLLGEWVLRVIVGAEFVAAFPVMLWLVAGAVVGIWAFPLEPLLISTGHAGAALRVRLWSTALYVPLLLLLLDTAGLIGAGWAALAASLFIFVALLLPVIRWFDR 445
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: UPI00138FA8A3 (lipopolysaccharide biosynthesis protein n=1 Tax=Oleisolibacter albus TaxID=2171757 RepID=UPI00138FA8A3) HSP 1 Score: 186 bits (472), Expect = 1.220e-52 Identity = 115/255 (45.10%), Postives = 154/255 (60.39%), Query Frame = 1 Query: 1 LEAYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLRRHAV 765 L A+L W ++ +V L LI RELR +G+L + P+ +W FVWS NLN+TL+L TH GTL VG M+G+ A L+R+ARQ+ + + P KLL P IYPELARLAA A MR + R+AL+AG GA+AL+ V + G LL V GP F AYGVM+ L AA + + SFPLEPMLIS+GQA +A ++R T+ALY+ +F GL GAG L ++ + V +W R+ AV Sbjct: 198 LVAFLAAWYLATVVAGLFLIAAGWRELRTRGLLEGFRWRGEGPMTHGFPG-IWSFVWSTNLNSTLELAFTHVGTLVVGWMMGSTEAGLFRVARQVADGVAKPAKLLVPAIYPELARLAAAGDRASMRHLIERSALIAGAGATALMLVAALLGKPLLSLVLGPEFVSAYGVMLWLIAAAVVGIWSFPLEPMLISNGQAGTATRIRAWTSALYIPALFLALDHAGLAGAGWVRLAVAVLMFAAFLRPVLRWFRQPAV 451
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: A0A858R4Z0_9PROT (Lipopolysaccharide biosynthesis protein n=1 Tax=Rhodospirillaceae bacterium B3 TaxID=2728875 RepID=A0A858R4Z0_9PROT) HSP 1 Score: 182 bits (461), Expect = 3.950e-51 Identity = 113/257 (43.97%), Postives = 158/257 (61.48%), Query Frame = 1 Query: 1 LEAYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLRRHAVTA 771 +E +L W ++ +V + LI +EL+ +G+L + + +W FV+S NLN TL+L TH GTL VG LG AAL+R+ARQ+ EAL P KLL P IYPELARL+A MR R+ALLAG GAS +G++ +AG WLL V GP+F PAY VM+ L AA + + +FPLEP+LISSG+A +AL+ R+ ++A+Y+ ++F GL+GAG A L AS+ + V +W R A+ A Sbjct: 175 IEWFLAAWYLATVVAGVYLIHAGWKELKVRGLLDGFRWRGGGLTRGFDG--IWKFVFSTNLNATLELAFTHIGTLVVGWYLGPKDAALFRVARQVGEALAKPAKLLVPAIYPELARLSAAGEHKTMRDLALRSALLAGAGASLGLGLVWLAGEWLLGLVLGPDFIPAYPVMIWLVAAAVVGIWAFPLEPVLISSGEAGAALRARIWSSAVYLPVLFLAVQSYGLIGAGWARLFASVVVFAAFLLPVIRWFRGQALPA 429
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: A0A2K9N9R4_9PROT (Teichoic acid transporter n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2K9N9R4_9PROT) HSP 1 Score: 180 bits (457), Expect = 2.440e-50 Identity = 112/259 (43.24%), Postives = 153/259 (59.07%), Query Frame = 1 Query: 7 AYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRK--------VWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLRRH 759 A+LV W I+ V + LI ELR++G+L + W D K VW FVWS NL++TL+L TH GTLAVG MLG AAL+RIARQL EAL P KLL P IYPEL+R+ +MR + R+ALLAG GA + + G LR + G F PA+ VM+ L AA + + SFPLEP+++S+G+A AL VR+ TTA+Y+ ++ W GL+GAG A + +++ LV + V +W R+ Sbjct: 207 AFLVAWYIATAVAGIYLIAKGWSELRKRGLLDGY--------SWRGDGKPMSHGFDGVWSFVWSTNLSSTLELAYTHIGTLAVGWMLGPRDAALFRIARQLGEALAKPAKLLIPAIYPELSRMIEARQFGEMRSLIQRSALLAGAGAMLALVICWFIGEIGLRLIVGEEFVPAWPVMMWLVAAAVVGIWSFPLEPVMVSAGEAHKALMVRIWTTAVYIPILLACIHWFGLIGAGWARMFSAILVLVAFLVPVVRWFRQR 457
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: A0A5M6I828_9PROT (Lipopolysaccharide biosynthesis protein n=2 Tax=Roseospira marina TaxID=140057 RepID=A0A5M6I828_9PROT) HSP 1 Score: 180 bits (456), Expect = 3.350e-50 Identity = 111/249 (44.58%), Postives = 152/249 (61.04%), Query Frame = 1 Query: 10 YLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPD-RKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLR 753 +LV W + V L L A RE++ +G+L P W D ++W FVWS NLN +L L+ H TLAVG +LG AAL+R+ARQ+ AL+ P KLL P IYPELA+L+ AI MR + RAALLAG GAS + V + G WLL V GP+F AY VM+ L A + + +FPLEP+LIS G+A +AL+ R+ ++ALY+ ++ L GL+GAG A L A++ L+ + V +W R Sbjct: 215 FLVAWYLGTTVAGLSLFYAAWREVKGRGLLDGF-RWWGGP--WTADFPRIWSFVWSTNLNASLGLISNHLSTLAVGGLLGPSDAALFRVARQVGTALSKPAKLLVPAIYPELAKLSTEGAIQTMRSLVGRAALLAGAGASLSLLVAWLGGEWLLGLVLGPDFVAAYPVMLWLVAAGVVSIAAFPLEPVLISGGEAGTALRARLWSSALYIPVLLLLVHQFGLIGAGWARLFATVITLIAFLLPVLRWFR 460
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Match: UPI00190403AE (lipopolysaccharide biosynthesis protein n=1 Tax=Azospirillum sp. YIM B02556 TaxID=2800326 RepID=UPI00190403AE) HSP 1 Score: 179 bits (453), Expect = 6.780e-50 Identity = 114/251 (45.42%), Postives = 149/251 (59.36%), Query Frame = 1 Query: 1 LEAYLVTWMISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWSANLNTTLQLVLTHFGTLAVGAMLGAPAAALYRIARQLTEALTTPVKLLTPTIYPELARLAARNAIADMRRFMARAALLAGVGASALVGVLIVAGPWLLRTVAGPNFAPAYGVMVVLGIAAAIRLGSFPLEPMLISSGQALSALKVRMVTTALYMALMFFLCSWLGLVGAGLALLIASLTNLVGQIFVVEKWLR 753 LE +L W + L L + REL+R+G+L + + A P +WGFVWS NL TL+LV TH TL VG +LGA AAL+R+ARQ+ EALT P KLL P IYPELARL A MR + R+AL+AGVG + + G WLL V GP+F AY VM+ L AAA+ + +FPLEP+LIS G+A +AL R+ + ALY+ ++ GLVGAG A L A+ V + V +W R Sbjct: 197 LEWFLAVWYLGTAAAGLHLFHVGRRELKRRGLLDGYRWRGGAWTAGFPG--IWGFVWSTNLGITLELVFTHISTLVVGGLLGAADAALFRVARQIGEALTKPAKLLVPAIYPELARLCADGEHHVMRALIQRSALIAGVGGVLSLVLAWGGGDWLLGAVLGPDFVAAYPVMLWLVAAAAVSVAAFPLEPVLISGGEAGAALHARLWSAALYLPVLLLSVQHWGLVGAGWARLFAAALTGVAFLIPVLRWFR 445 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12882.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12882.2.1 >prot_P-wetherbeei_contig12882.2.1 ID=prot_P-wetherbeei_contig12882.2.1|Name=mRNA_P-wetherbeei_contig12882.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=250bp MISEIVPCLVLIGMAVRELRRQGVLAPHPEQTAAPVQWAPDRKVWGFVWSback to top mRNA from alignment at P-wetherbeei_contig12882:1149..1922- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12882.2.1 ID=mRNA_P-wetherbeei_contig12882.2.1|Name=mRNA_P-wetherbeei_contig12882.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=774bp|location=Sequence derived from alignment at P-wetherbeei_contig12882:1149..1922- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12882:1149..1922- >mRNA_P-wetherbeei_contig12882.2.1 ID=mRNA_P-wetherbeei_contig12882.2.1|Name=mRNA_P-wetherbeei_contig12882.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=750bp|location=Sequence derived from alignment at P-wetherbeei_contig12882:1149..1922- (Phaeothamnion wetherbeei SAG_119_79)back to top |