mRNA_P-wetherbeei_contig1275.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1275.1.1 vs. uniprot
Match: A0A353LPC3_9PROT (Histidine kinase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LPC3_9PROT) HSP 1 Score: 265 bits (676), Expect = 3.760e-80 Identity = 170/441 (38.55%), Postives = 252/441 (57.14%), Query Frame = 1
Query: 1 LTMLFAILAGIVEWNYLALQDVVSGVEWISLITIEIGLGAVLLILIVV---PAEYVDKL--ALAAFTGAIF-----YIFSMLLAAIFIDRDVARSLHAVLWFHPAFIAVSLTQPLKLAQ--SMCWLVVALLAGVILYCGMTLEDVLHTTAFINHVLILLSLCASASLLYALSRYRQEQGANRARIEVLNETAGLLRAEVAAKEKARSELEQANRIISGFLDNMSHELRTPLNAVIGFSELIRDELFGAHSNQKYKEYAADILDSGQHLLGLVNNLLYYSKLSVGKITPDFVALDAEALLKDVADGQGVLAARVGVKVIVDAPGKPT--LTADHNGLLRLLHGLLNNAIKFSRPDDEIILQAAEGADGACVITIKDEDAGIPQDELEQIFTPFRKGRHSEDKAIAGTGMGLAMAKMLVDLHDGLISIASREGEGTTVTLVFP 1281
LT+ A L G+VEW YLA+ + +E+I+L E+ + + + E D+ AL T IF YI M+ +F + R+LH LW HPA IA++LTQ + A + ++VA+L+ V + + + H T ++ V + LS+CAS +LLY L+ R+E+GA RA + ++ ET LR ++A++ EQ N+ ++ FL+N+SHELRTPLN +IGFSE+IRDE+FGAH++ +YK+YA DI SG HLLGLVN+LL++S+L+ G++T D +LL ++AD G+ + VD P + D + ++L L++N IKFS I L AD C I + D GI + E E I FR+G S+ A+ GTG+GLAM KMLVD+ DG+I + GTTV + P
Sbjct: 35 LTLGCAALGGMVEWWYLAVTGQATFIEYIALAATELSFLTFITLGFLRFRNSRESFDQAINALQWMTFTIFWLAALYILVMVGGTLFSNGVPGRALHTALWIHPALIAMALTQSPQTAWRLGLVAVLVAVLSSVAFAFALDTDGMPHVTV-VSFVQLSLSVCASTALLYVLAALREERGATRAELALMEETQHELRRSAELAQEAQAAAEQMNKSMTAFLNNISHELRTPLNGIIGFSEIIRDEMFGAHASPQYKDYAGDIAGSGAHLLGLVNDLLFFSQLNAGRVTITPEPFDIYSLLNEIADSYATQTEDAGLTIKVDEAANPDYFINLDTVVIRQILRNLISNGIKFSHAGGVITLGYRMLADNHCEIWVSDTGIGISEKEQENILQLFRRGAESDRNAVPGTGLGLAMVKMLVDMQDGIIDFETGGKCGTTVRITLP 474
BLAST of mRNA_P-wetherbeei_contig1275.1.1 vs. uniprot
Match: A0A3C0TXM1_9PROT (Histidine kinase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TXM1_9PROT) HSP 1 Score: 255 bits (652), Expect = 1.460e-79 Identity = 133/245 (54.29%), Postives = 172/245 (70.20%), Query Frame = 1
Query: 547 LRAEVAAKEKARSELEQANRIISGFLDNMSHELRTPLNAVIGFSELIRDELFGAHSNQKYKEYAADILDSGQHLLGLVNNLLYYSKLSVGKITPDFVALDAEALLKDVADGQGVLAARVGVKVIVDAPGKPTLTADHNGLLRLLHGLLNNAIKFSRPDDEIILQAAEGADGACVITIKDEDAGIPQDELEQIFTPFRKGRHSEDKAIAGTGMGLAMAKMLVDLHDGLISIASREGEGTTVTLVFP 1281
+R EV AKE+A ELE+AN ++S FLDN+SHELRTPLNA+IGFSELI EL G +N+KYKEY+ DIL SGQH+L LVNNLLY+++LS G+I + A +L A+ A V+++V+ G+P L AD GLLR+LH LL+NAIKFS P E++L+A G DGAC I I+D GIPQ EL+ + PFR+G S KA GTG+GL++AK+ +D H G I I S E +GT VTL+FP
Sbjct: 1 MREEVEAKEQALRELERANMVVSDFLDNISHELRTPLNAIIGFSELIHGELLGGLANEKYKEYSGDILQSGQHMLELVNNLLYFTRLSAGRIELKRDNVVACEVLNSAAEASRRQANEADVRIVVEEDGQPLLHADMAGLLRILHNLLDNAIKFSWPGGEVLLKAVTGRDGACEICIRDNGVGIPQTELDTVLLPFRRGEGSARKATPGTGLGLSLAKVFMDQHGGSIFIDSAEDKGTLVTLLFP 245
BLAST of mRNA_P-wetherbeei_contig1275.1.1 vs. uniprot
Match: A0A3D4MGM2_9PROT (Histidine kinase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D4MGM2_9PROT) HSP 1 Score: 187 bits (474), Expect = 3.160e-50 Identity = 105/242 (43.39%), Postives = 150/242 (61.98%), Query Frame = 1
Query: 574 KARSELEQANRIISGFLDNMSHELRTPLNAVIGFSELIRDELFGAHSNQKYKEYAADILDSGQHLLGLVNNLLYYSKLSVGKITPDFVALDAEALLKDVADGQGVL------AARVGVKVIVDAPGKPTLTADHNGLLRLLHGLLNNAIKFSRPDDEIILQAAEGADGACVITIKDEDAGIPQDELEQIFTPFRKGRHSEDKAIAGTGMGLAMAKMLVDLHDGLISIASREGEGTTVTLVFP 1281
+A+ + + ANR S FL NMSHELR PLNA+IGFSE+I++E FGA SN KY+EY DI S +HLL ++N++L SK+ GK+ ++ E + DV G + AA+VG++ + A P + D L ++L L++NA+KFS P ++ + A D + VI I D AGIP+D+L + PF + GTG+GL +AK +V+LHDG IS++SREG GTTVT+ FP
Sbjct: 269 RAKQDADVANRAKSSFLANMSHELRNPLNAIIGFSEMIKNETFGAISNPKYEEYIGDIHFSARHLLDIINDVLDMSKIEAGKVN----LMETEVAVDDVMRSVGRIMLPRAQAAQVGLRTDIPAD-LPFIKGDQRLLRQILINLVSNAVKFSPPGTDVAVSARISNDNSLVIEIADHGAGIPEDKLRYVMEPFGQVGDPRSYKGQGTGLGLPLAKAMVELHDGHISLSSREGMGTTVTMSFP 505
BLAST of mRNA_P-wetherbeei_contig1275.1.1 vs. uniprot
Match: A0A257WWG6_9CAUL (Histidine kinase (Fragment) n=2 Tax=unclassified Caulobacter TaxID=2648921 RepID=A0A257WWG6_9CAUL) HSP 1 Score: 180 bits (456), Expect = 1.600e-48 Identity = 103/263 (39.16%), Postives = 158/263 (60.08%), Query Frame = 1
Query: 520 EVLNETAGLLRAEVAAKEKARS------ELEQANRIISGFLDNMSHELRTPLNAVIGFSELIRDELFGAHSNQKYKEYAADILDSGQHLLGLVNNLLYYSKLSVGKITPDFVALDAEALLKDVADGQGVLAARVGVKVIVDAPGKPTLTADHNGLLRLLHGLLNNAIKFSRPDDEIILQAAEGAD--GACV-ITIKDEDAGIPQDELEQIFTPFRKGRHSEDKAIAGTGMGLAMAKMLVDLHDGLISIASREGEGTTVTLVFP 1281
++ N AGL R++ E AR + E AN+ S FL NMSHELRTPLNA+ GFSE++ +E+FG +Q+YK Y+ DI +SGQHLL L+N++L SK+ GK+ F L+ E + +D A G+K+++D P P + AD+ + ++L LL+NAIKF+ + ++A D G V ++++D GI +D+L ++ PF + K GTG+GLA+ K L+++HDG + + S GEGTTV+ + P
Sbjct: 141 QLQNAVAGLERSQEQLAELARKYEMEKVKAEGANKAKSEFLANMSHELRTPLNAINGFSEIMMNEMFGQLGDQRYKGYSQDIHNSGQHLLALINDILDMSKIEAGKMNLKFEPLNLEDVAEDAVRLVRNRAEAAGLKLVIDFPQLPEIEADYRAVKQVLLNLLSNAIKFTPRAGSVTIRAEVRRDPLGERVRVSVQDTGIGIAKDDLARLARPFEQVESQLSKTTQGTGLGLALTKSLIEMHDGSLEMTSTPGEGTTVSFILP 403
BLAST of mRNA_P-wetherbeei_contig1275.1.1 vs. uniprot
Match: A0A081B6T5_9HYPH (Histidine kinase n=2 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081B6T5_9HYPH) HSP 1 Score: 182 bits (462), Expect = 1.910e-48 Identity = 132/390 (33.85%), Postives = 208/390 (53.33%), Query Frame = 1
Query: 151 EYVDKLALAAFTGAIFYIFSMLLAAIFIDRDVARSLHAVLWFHPAFIAVSLTQPLKLAQSMCWLVVALLAGV----ILYCGMTLEDVLHTTAFINHVLILLSLCASASLLYALSRYRQEQGANRARIEVLNETAGLL-----RAEVAAK--EKARSELEQANRIISGFLDNMSHELRTPLNAVIGFSELIRDELFGAHSNQKYKEYAADILDSGQHLLGLVNNLLYYSKLSVGKITPDFVALDAEALLKDVADGQGVLA-ARVGVKVIVDAPGKPTLTADHNGLLRLLHGLLNNAIKFSRPDDEIILQAAEGADGACVITIKDEDAGIPQDELEQIFTPF-RKGRHSEDKAIAGTGMGLAMAKMLVDLHDGLISIASREGEGTTVTLVFP 1281
+++ ++ + G + YI + L ++ +H W A++ TQP+K AQ MCW A L V ++Y G + T F++ I+ S A+ ++LY LS +RQEQ A+R R +V + + +A+ A + E+ARS E A R+ F+ N+SHELRTPLNA++GF+E+I E +GAHS+ +Y EYA DI SG+HLLGL+N +L +S++ G+I DA ++ + LA A+ + V + LT D L +++ L++NAIKF+ + EG+D +T+ D G+ +D ++FTPF R R D GTG+GLA+ K LV+ G I + S+ G G+T + P
Sbjct: 112 QHIPRVIFWLYWGIMAYIGAGFLNSLSQGLGTDYGIHFAAWAVIAYLIAVATQPVKRAQIMCWSGFASLCAVSVFFLVYSGANILTDPQTVTFVS---IMGSQAAAIAVLYVLSVFRQEQLADRQRAKVWQHASEEMIRYAQQADRARRDAEEARSSAEAAMRMRDRFVANISHELRTPLNAILGFAEVIERETYGAHSDGRYGEYAGDIRRSGRHLLGLINQILDFSRMEAGEINLKLEQADAREVVSESLRLIAPLAEAKPDISVQFEPGPSIPLTTDTQALRQIVTNLVSNAIKFTDRGYVDVRLNEEGSD-MLTLTVTDTGCGLSEDARRRVFTPFYRVARQGSDAG--GTGLGLAIVKSLVEGLGGTIDVESQPGRGSTFQIRLP 495
BLAST of mRNA_P-wetherbeei_contig1275.1.1 vs. uniprot
Match: A0A0Q7SW26_9CAUL (Histidine kinase n=3 Tax=unclassified Brevundimonas TaxID=2622653 RepID=A0A0Q7SW26_9CAUL) HSP 1 Score: 185 bits (469), Expect = 6.270e-48 Identity = 94/237 (39.66%), Postives = 145/237 (61.18%), Query Frame = 1
Query: 571 EKARSELEQANRIISGFLDNMSHELRTPLNAVIGFSELIRDELFGAHSNQKYKEYAADILDSGQHLLGLVNNLLYYSKLSVGKITPDFVALDAEALLKDVADGQGVLAARVGVKVIVDAPGKPTLTADHNGLLRLLHGLLNNAIKFSRPDDEIILQAAEGADGACVITIKDEDAGIPQDELEQIFTPFRKGRHSEDKAIAGTGMGLAMAKMLVDLHDGLISIASREGEGTTVTLVFP 1281
E A + E AN+ S FL NMSHELRTPLNA+ GFSE++ E+FG + +YK YAADIL SGQHLL L+N++L +K+ GK+T + + + +++D G+ ++VDAP P + AD+ GL +++ L++NA+KF+ +I++ + D + + D GI + +L+++ PF + K GTG+GLA+ K L++LH G+++IAS G GTTV V P
Sbjct: 552 EVAMTRAEAANQAKSEFLANMSHELRTPLNAINGFSEIMAGEMFGPLGDARYKGYAADILKSGQHLLSLINDILDMAKIEAGKLTLHYEKVSLKEVVEDATRLMRGKIQEAGLNLLVDAPEMPEIDADYRGLKQVVLNLISNAVKFTPEGGDIVVALSREDDDRVRVAVTDTGIGIAEKDLDRLARPFEQVEGQHSKTTQGTGLGLALTKSLIELHGGVLTIASEPGRGTTVGFVLP 788
BLAST of mRNA_P-wetherbeei_contig1275.1.1 vs. uniprot
Match: UPI001469EA5E (ATP-binding protein n=1 Tax=Sneathiella chinensis TaxID=349750 RepID=UPI001469EA5E) HSP 1 Score: 177 bits (450), Expect = 7.760e-48 Identity = 99/238 (41.60%), Postives = 140/238 (58.82%), Query Frame = 1
Query: 571 EKARSELEQANRIISGFLDNMSHELRTPLNAVIGFSELIRDELFGAHSNQKYKEYAADILDSGQHLLGLVNNLLYYSKLSVGKITPDFVALDAEALLKDVADGQGVLAARVGVKVIVDAPGK-PTLTADHNGLLRLLHGLLNNAIKFSRPDDEIILQAAEGADGACVITIKDEDAGIPQDELEQIFTPFRKGRHSEDKAIAGTGMGLAMAKMLVDLHDGLISIASREGEGTTVTLVFP 1281
E + E A R+ S FL NMSHELRTPLNAVIGFSELI + FG +Y +Y DIL+SG+HLL ++N++L SK+ G+ T D +D +++ V GVLA+R GV++ D P + P L D + ++L L++N +K++ + L+ DG+ + I D GIP++EL I PF + ++ GTG+GLA+ K L DLHD I + S G GTTV L FP
Sbjct: 151 EISNERAEHAARVKSQFLANMSHELRTPLNAVIGFSELIVSKAFGEIEPPRYGQYVVDILESGRHLLSMINDILDMSKIEAGRYTVDERQIDLCHVIRTVCKMCGVLASRKGVQIQCDMPAEGPILIGDERAIKQMLLNLVSNGVKYTERGGAVTLRGHSQPDGSVSLEIIDTGIGIPEEELPGIMEPFVQAGNNRTSKDEGTGLGLAIVKALADLHDTRIDMKSAVGVGTTVILTFP 388
BLAST of mRNA_P-wetherbeei_contig1275.1.1 vs. uniprot
Match: UPI001A963E39 (ATP-binding protein n=1 Tax=Arenibaculum pallidiluteum TaxID=2812559 RepID=UPI001A963E39) HSP 1 Score: 182 bits (463), Expect = 1.980e-47 Identity = 102/244 (41.80%), Postives = 150/244 (61.48%), Query Frame = 1
Query: 574 KARSELEQANRIISGFLDNMSHELRTPLNAVIGFSELIRDELFGAHSNQKYKEYAADILDSGQHLLGLVNNLLYYSKLSVGKITPDFVALDAEALLKD--------VADGQGVLAARVGVKVIVDAPGKPTLTADHNGLLRLLHGLLNNAIKFSRPDDEIILQAAEGADGACVITIKDEDAGIPQDELEQIFTPFRKGRHSEDKAIAGTGMGLAMAKMLVDLHDGLISIASREGEGTTVTLVFP 1281
+A+ + E ANR S FL +MSHELRTPLNAVIGFSE+I+DELFG + N +Y+EYA DI DSG+HLL L+N +L +K+ G + ++ E +L+ A GQ VL +G + PG P L D L ++L LL+NA+KF+ P E+ L+A DG V+T+ D G+ +++L+ F PFR+ ++ ++ GTG+GL ++K L +LH G ++I S G+GT V + P
Sbjct: 470 EAKEQAELANRTKSEFLAHMSHELRTPLNAVIGFSEIIKDELFGPNHNPRYQEYARDIHDSGRHLLTLINEILDLAKVEAGGVELREETIEVEKVLESCRRLVRERAAAGQIVL--NIGAE-----PGLPRLLVDVTRLKQILLNLLSNAVKFTTPGGEVRLEARRAQDGGVVLTVADTGIGMSEEQLDIAFQPFRQVENAFNRKYQGTGLGLPLSKALAELHGGSVTIESEPGKGTRVRVWLP 706
BLAST of mRNA_P-wetherbeei_contig1275.1.1 vs. uniprot
Match: A0A2A4RYR1_9HYPH (Histidine kinase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A4RYR1_9HYPH) HSP 1 Score: 180 bits (456), Expect = 8.960e-47 Identity = 103/242 (42.56%), Postives = 150/242 (61.98%), Query Frame = 1
Query: 571 EKARSELEQANRIISGFLDNMSHELRTPLNAVIGFSELIRDELFGAHSNQKYKEYAADILDSGQHLLGLVNNLLYYSKLSVGKITPDFVALDAEALLKD---VADGQGVLAARVGVKVIVDAPGKPTLTADHNGLLRLLHGLLNNAIKFSRPDDEIILQAAEGAD--GACVITIKDEDAGIPQDELEQIFTPFRKGRHSEDKAIAGTGMGLAMAKMLVDLHDGLISIASREGEGTTVTLVFP 1281
EK R+E ANR S FL NMSHELRTPLNA+IGFSE++ E FG N KYKEY+ DI DSGQHLL ++N++L SK+ G++T + V L+ E+L ++ + G+ +A GV++ P L AD + ++L LL+NA+KF+ +I L+A D G I +KD GIP D L ++ PF + + K GTG+GLA+++ L+++H+G++ I S EG GT V+ + P
Sbjct: 409 EKTRAET--ANRSKSEFLANMSHELRTPLNAIIGFSEMMNGEFFGPLGNAKYKEYSQDIHDSGQHLLDVINDILDMSKIEAGRLTLEPVNLELESLAEESLRLISGRAEVA---GVRINNQIKDFPLLLADKRAVKQVLINLLSNAVKFTPAGGDITLKAEPYNDHPGWARIIVKDSGIGIPADALPKLGRPFEQVENQHSKTYNGTGLGLALSRSLIEMHEGILIIESEEGIGTEVSFILP 645
BLAST of mRNA_P-wetherbeei_contig1275.1.1 vs. uniprot
Match: UPI001BBE5C17 (Ammonium transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=UPI001BBE5C17) HSP 1 Score: 180 bits (457), Expect = 1.320e-46 Identity = 102/253 (40.32%), Postives = 148/253 (58.50%), Query Frame = 1
Query: 526 LNETAGLLRAEVAAKEKARSELEQANRIISGFLDNMSHELRTPLNAVIGFSELIRDELFGAHSNQKYKEYAADILDSGQHLLGLVNNLLYYSKLSVGKITPDFVALDAEALLKDVADGQGVLAARVGVKVIVDAPGK-PTLTADHNGLLRLLHGLLNNAIKFSRPDDEIILQAAEGADGACVITIKDEDAGIPQDELEQIFTPFRKGRHSEDKAIAGTGMGLAMAKMLVDLHDGLISIASREGEGTTVTLVFP 1281
+N A LR + ++A+ E+A+ S FL NMSHELRTPLNAVIGFSE++ +ELFG + +YKEYA+DIL SG+HLL LVN+LL ++++ G++ + LD + ++ AA V + P P L AD ++L LL NA+KF+ P + L A DG I + D G+ ++E+ + PF + H +K+ GTG+GL + + L+ LH G I+I S EG GTTVT+ FP
Sbjct: 447 VNRDADALRRAIEDLKRAKQAAEEASNAKSAFLANMSHELRTPLNAVIGFSEILTNELFGQLGDPRYKEYASDILASGRHLLSLVNDLLDHTRIEAGRMELNVAELDVQEQIEAAMRLMRERAATASVTLQASFPDLLPYLMADERAFRQMLLNLLGNAVKFTPPGGSVTLSADLEGDGRLAIQVSDTGIGMKREEVPRALEPFVQLHHHMNKSYGGTGLGLPLVQALMRLHGGSITIDSAEGNGTTVTIRFP 699 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1275.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1275.1.1 >prot_P-wetherbeei_contig1275.1.1 ID=prot_P-wetherbeei_contig1275.1.1|Name=mRNA_P-wetherbeei_contig1275.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=425bp MLFAILAGIVEWNYLALQDVVSGVEWISLITIEIGLGAVLLILIVVPAEYback to top mRNA from alignment at P-wetherbeei_contig1275:2272..3552- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1275.1.1 ID=mRNA_P-wetherbeei_contig1275.1.1|Name=mRNA_P-wetherbeei_contig1275.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1281bp|location=Sequence derived from alignment at P-wetherbeei_contig1275:2272..3552- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1275:2272..3552- >mRNA_P-wetherbeei_contig1275.1.1 ID=mRNA_P-wetherbeei_contig1275.1.1|Name=mRNA_P-wetherbeei_contig1275.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1275bp|location=Sequence derived from alignment at P-wetherbeei_contig1275:2272..3552- (Phaeothamnion wetherbeei SAG_119_79)back to top |