mRNA_P-wetherbeei_contig1269.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1269.3.1 vs. uniprot
Match: A0A836C8Y8_9STRA (Putative GTPase activating protein for Arf-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Y8_9STRA) HSP 1 Score: 142 bits (359), Expect = 4.340e-39 Identity = 68/111 (61.26%), Postives = 85/111 (76.58%), Query Frame = 3 Query: 3 LPQSIIMNFGTFVCTVCSGIHREFSHRQKSIGLSNFTEDEVTVVVNGGNDKVNALYMARHDPRHDLAEPDGNSVEKRREFIRTKYVDRRWYATPEDMARQREREQRTKEAR 335 LP I+++F TFVCT CSGIHREFSHR KS+ L+NFT+DEV + GGN N L++A++DP DL EPDG+SVEKRREFIR KY ++RWYAT ED+AR+ E + R AR Sbjct: 30 LPNYIVLDFKTFVCTACSGIHREFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDGSSVEKRREFIRMKYQEKRWYATTEDLAREAEEQARRASAR 140
BLAST of mRNA_P-wetherbeei_contig1269.3.1 vs. uniprot
Match: D8LD15_ECTSI (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD15_ECTSI) HSP 1 Score: 144 bits (364), Expect = 1.760e-38 Identity = 69/104 (66.35%), Postives = 79/104 (75.96%), Query Frame = 3 Query: 3 LPQSIIMNFGTFVCTVCSGIHREFSHRQKSIGLSNFTEDEVTVVVNGGNDKVNALYMARHDPRHDLAEPDGNSVEKRREFIRTKYVDRRWYATPEDMARQRERE 314 LPQ II +F TFVCT CSGIHREFSHR KSI L+ F+E+EV V GGN+ N LYMAR+ P HDL EP+G K REFIRTKYVD+RWY TPED+A R+RE Sbjct: 39 LPQWIISDFNTFVCTACSGIHREFSHRVKSISLATFSEEEVAAVKAGGNETSNKLYMARYRPGHDLPEPEGGRAAKHREFIRTKYVDKRWYGTPEDLANDRQRE 142
BLAST of mRNA_P-wetherbeei_contig1269.3.1 vs. uniprot
Match: A0A6H5KW83_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW83_9PHAE) HSP 1 Score: 147 bits (371), Expect = 2.230e-36 Identity = 71/111 (63.96%), Postives = 84/111 (75.68%), Query Frame = 3 Query: 3 LPQSIIMNFGTFVCTVCSGIHREFSHRQKSIGLSNFTEDEVTVVVNGGNDKVNALYMARHDPRHDLAEPDGNSVEKRREFIRTKYVDRRWYATPEDMARQREREQRTKEAR 335 LPQ II +F TFVCT CSGIHREFSHR KSI L+ F+E+EV V GGN+ N LYMAR+ P HDL EP+G K REFIRTKYVD+RWY TPED+A+ R+RE +E+R Sbjct: 39 LPQYIISDFNTFVCTACSGIHREFSHRVKSISLATFSEEEVAAVKAGGNEASNKLYMARYRPGHDLPEPEGGRAAKHREFIRTKYVDKRWYGTPEDLAQDRQREAEREESR 149
BLAST of mRNA_P-wetherbeei_contig1269.3.1 vs. uniprot
Match: A0A0M0K2F0_9EUKA (Arf gtpase activating protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K2F0_9EUKA) HSP 1 Score: 101 bits (251), Expect = 7.800e-23 Identity = 46/90 (51.11%), Postives = 62/90 (68.89%), Query Frame = 3 Query: 9 QSIIMNFGTFVCTVCSGIHREFSHRQKSIGLSNFTEDEVTVVVNGGNDKVNALYMARHDPRHDLAEPDGNSVEKRREFIRTKYVDRRWYA 278 Q +++NF TFVCT CSGIHRE H+ KS+G+S FT DE+ V GGNDK ++MA++D R D A P EK R F++ KY ++RWY+ Sbjct: 36 QYVVLNFNTFVCTACSGIHREMQHKIKSVGMSTFTTDEIKAVDAGGNDKAQKMWMAKYDAR-DGAVPAEGETEKLRAFLKRKYQEKRWYS 124
BLAST of mRNA_P-wetherbeei_contig1269.3.1 vs. uniprot
Match: A0A7S2KRS9_9DINO (Hypothetical protein (Fragment) n=2 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2KRS9_9DINO) HSP 1 Score: 102 bits (253), Expect = 1.660e-22 Identity = 49/101 (48.51%), Postives = 66/101 (65.35%), Query Frame = 3 Query: 6 PQSIIMNFGTFVCTVCSGIHREFSHRQKSIGLSNFTEDEVTVVVNGGNDKVNALYMARHDPRHDLAEPDGNSVEKRREFIRTKYVDRRWYATPEDMARQRE 308 P + +++ TFVCT CSG+HREFSH+ K I +S +T +EV + GGN K ++AR DPR D AEPD + + REFIR KY+DRRW +D R R+ Sbjct: 34 PTYVCLSYYTFVCTTCSGLHREFSHKIKGISISKWTPEEVDEIEQGGNAKAAEKFLARWDPR-DFAEPDSSDPNRCREFIRMKYIDRRWTNRGDDSGRDRD 133
BLAST of mRNA_P-wetherbeei_contig1269.3.1 vs. uniprot
Match: A0A7S1APG6_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1APG6_NOCSC) HSP 1 Score: 99.4 bits (246), Expect = 7.220e-22 Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 3 Query: 6 PQSIIMNFGTFVCTVCSGIHREFSHRQKSIGLSNFTEDEVTVVVNGGNDKVNALYMARHDPRHDLAEPDGNSVEKRREFIRTKYVDRRW 272 P + M FGTFVCT CSG+HREFSH+ K I +S F+ +EV + GGN K ++MAR +PR D EPD + K REF+R KYVD++W Sbjct: 34 PTYVCMTFGTFVCTTCSGLHREFSHKVKGISVSKFSVEEVEELERGGNAKAFDIWMARWEPR-DCPEPDNSEQGKVREFLRQKYVDKKW 121
BLAST of mRNA_P-wetherbeei_contig1269.3.1 vs. uniprot
Match: A0A4D9DD40_9STRA (Arf-GAP domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DD40_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.560e-21 Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 3 Query: 3 LPQSIIMNFGTFVCTVCSGIHREFSHRQKSIGLSNFTEDEVTVVVNGGNDKVNALYMARHDPRHDLAEPDGNSVEKRREFIRTKYVDRRWY 275 LPQ + + F TF+CT CSGIHREFSHR KSI LS F+ +EV + +GGN+ A+Y+AR +PR D AEP + R++IR KYV+RRW+ Sbjct: 35 LPQYVNLTFNTFICTACSGIHREFSHRVKSISLSTFSLEEVKALKDGGNEACAAMYLARWEPR-DYAEPQAGDEHRIRDWIRHKYVERRWH 124
BLAST of mRNA_P-wetherbeei_contig1269.3.1 vs. uniprot
Match: A0A7S1LNS8_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1LNS8_ALECA) HSP 1 Score: 97.4 bits (241), Expect = 2.800e-21 Identity = 47/89 (52.81%), Postives = 60/89 (67.42%), Query Frame = 3 Query: 6 PQSIIMNFGTFVCTVCSGIHREFSHRQKSIGLSNFTEDEVTVVVNGGNDKVNALYMARHDPRHDLAEPDGNSVEKRREFIRTKYVDRRW 272 P I ++F TFVCT CSG+HREFSH+ K I +S +T +EV + GGN + ++AR DPR D EPD + K R+FIR KYVDRRW Sbjct: 34 PTYICLSFTTFVCTTCSGLHREFSHKVKGISVSKWTPEEVEEIERGGNARAADKWLARWDPR-DYPEPDSSDQSKCRDFIRMKYVDRRW 121
BLAST of mRNA_P-wetherbeei_contig1269.3.1 vs. uniprot
Match: K3W7J5_GLOUD (Arf-GAP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7J5_GLOUD) HSP 1 Score: 96.7 bits (239), Expect = 2.860e-21 Identity = 49/96 (51.04%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 3 LPQSIIMNFGTFVCTVCSGIHREFSHRQKSIGLSNFTEDEV-TVVVNGGNDKVNALYMARHDPRHDLAEPDGNSVEKRREFIRTKYVDRRW-YATP 284 +PQ I ++F TFVCT CSGIHREF+HR KSI +S FTE EV T++ GGND + A+HDP G E+ R FIR Y+DR+W Y +P Sbjct: 38 MPQYICLDFNTFVCTSCSGIHREFAHRVKSISMSKFTESEVKTMIKLGGNDAAQKYWRAKHDPN--FRPQGGTDGERTRNFIRLTYIDRKWVYESP 131
BLAST of mRNA_P-wetherbeei_contig1269.3.1 vs. uniprot
Match: A0A0M0K1I0_9EUKA (Putative ADP-ribosylation factor gtpase-activating protein agd14-like protein n=2 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K1I0_9EUKA) HSP 1 Score: 95.5 bits (236), Expect = 7.460e-21 Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 3 Query: 9 QSIIMNFGTFVCTVCSGIHREFSHRQKSIGLSNFTEDEVTVVVNGGNDKVNALYMARHDPRHDLAEPDGNSVEKRREFIRTKYVDRR 269 Q +++NF TFVCT CSGIHRE H+ KS+G+S FT DE+ V GGNDK ++MA++D R D A P VEK R F++ KY ++R Sbjct: 36 QYVVLNFNTFVCTACSGIHREMQHKIKSVGMSTFTTDEIKAVDAGGNDKAQKMWMAKYDAR-DGAVPAEGEVEKLRAFLKRKYQEKR 121 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1269.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1269.3.1 >prot_P-wetherbeei_contig1269.3.1 ID=prot_P-wetherbeei_contig1269.3.1|Name=mRNA_P-wetherbeei_contig1269.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=268bp MNFGTFVCTVCSGIHREFSHRQKSIGLSNFTEDEVTVVVNGGNDKVNALYback to top mRNA from alignment at P-wetherbeei_contig1269:4115..5087+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1269.3.1 ID=mRNA_P-wetherbeei_contig1269.3.1|Name=mRNA_P-wetherbeei_contig1269.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=973bp|location=Sequence derived from alignment at P-wetherbeei_contig1269:4115..5087+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1269:4115..5087+ >mRNA_P-wetherbeei_contig1269.3.1 ID=mRNA_P-wetherbeei_contig1269.3.1|Name=mRNA_P-wetherbeei_contig1269.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=804bp|location=Sequence derived from alignment at P-wetherbeei_contig1269:4115..5087+ (Phaeothamnion wetherbeei SAG_119_79)back to top |