mRNA_P-wetherbeei_contig12595.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12595.1.1 vs. uniprot
Match: A0A127EYY1_9HYPH (Propionyl-CoA carboxylase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EYY1_9HYPH) HSP 1 Score: 378 bits (971), Expect = 1.010e-124 Identity = 195/261 (74.71%), Postives = 212/261 (81.23%), Query Frame = 1 Query: 1 ALDAFVVDGIRHNIPFVSALMAHSRWQAGQLSTGFIAEEYPDGFHPQAPTGIVGGTIAAVAAAIDHVLGERKRRISGQMTGREVTRDRRRVVRFGGTELLLDVAREAHGIAVHPIDTDGKMGATRVLVSSWKPGDPVWEGFVDGEAVAVQVRPVANGFALAHRGVEAKAYVYTMLEAEAARLMPVKKPPDTGKFLLCPMPGLVISIAVAQGQEIKAGETLAVVEAMKMQNVLRAERDGTVKTIKANPGDSLAVDAVIMEFA 783 ALDAFV+DGIRHNIPF+SALM H RWQ G+LSTGFIAEEYP+GFH P G I AVAAAIDHVLGERKR+ISGQM GR VTR+RRR V+ G L LDVAREA GIAV +D G G RVLVS W PGD VW G V G+ VAVQVRP+ NGFAL+HRGVE KAYVYT EA +A+LMP+K PPDTGK LLCPMPGLV SIAVA+GQE+KAGE LAVVEAMKM+NVLRAERD TVKTIK PGDSLAVDAVIMEFA Sbjct: 411 ALDAFVIDGIRHNIPFLSALMQHKRWQEGRLSTGFIAEEYPEGFHAVKPAGETVEVIGAVAAAIDHVLGERKRQISGQMNGRTVTRERRRAVQLGELWLTLDVAREAQGIAVQFVDAKGAAGLARVLVSDWMPGDAVWSGTVHGQPVAVQVRPILNGFALSHRGVETKAYVYTEREAASAKLMPIKLPPDTGKMLLCPMPGLVRSIAVAEGQEVKAGEALAVVEAMKMENVLRAERDATVKTIKVKPGDSLAVDAVIMEFA 671
BLAST of mRNA_P-wetherbeei_contig12595.1.1 vs. uniprot
Match: UPI000A4DAAA7 (biotin/lipoyl-binding protein n=4 Tax=Bradyrhizobium TaxID=374 RepID=UPI000A4DAAA7) HSP 1 Score: 341 bits (874), Expect = 2.300e-115 Identity = 176/261 (67.43%), Postives = 203/261 (77.78%), Query Frame = 1 Query: 1 ALDAFVVDGIRHNIPFVSALMAHSRWQAGQLSTGFIAEEYPDGFHPQAPTGIVGGTIAAVAAAIDHVLGERKRRISGQMTGREVTRDRRRVVRFGGTELLLDVAREAHGIAVHPIDTDGKMGATRVLVSSWKPGDPVWEGFVDGEAVAVQVRPVANGFALAHRGVEAKAYVYTMLEAEAARLMPVKKPPDTGKFLLCPMPGLVISIAVAQGQEIKAGETLAVVEAMKMQNVLRAERDGTVKTIKANPGDSLAVDAVIMEFA 783 ALDAF VDGIRHNIPF+SALM H RW+ G+LSTGFIAEE+P GF + P G V IAAV AAIDHVLGERKR+ISGQ+ GR V R+RRR V E+LL+V RE IAV +DT+GK G +L S WKPGDPVW+G +DG +AVQ RP+ANG LAH GVE YV+T EA +ARLMPV DTGK LLCPMPGLV+SIAV +GQE+KAGETLAVVEAMKMQNVLRAERDGTVK + A+ G +LAVDA+I+EFA Sbjct: 19 ALDAFYVDGIRHNIPFLSALMHHPRWREGRLSTGFIAEEFPKGFAVRVPEGEVARRIAAVGAAIDHVLGERKRQISGQLGGRVVQRERRRAVWLDRDEILLEVGREGDAIAVRFVDTEGKAGNAHLLQSPWKPGDPVWQGTIDGHFIAVQTRPIANGIRLAHHGVEVPVYVWTEAEATSARLMPVVSASDTGKKLLCPMPGLVVSIAVTEGQEVKAGETLAVVEAMKMQNVLRAERDGTVKKVHASAGATLAVDALILEFA 279
BLAST of mRNA_P-wetherbeei_contig12595.1.1 vs. uniprot
Match: A0A3A0F8H8_9PROT (Propionyl-CoA carboxylase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0F8H8_9PROT) HSP 1 Score: 353 bits (907), Expect = 4.090e-115 Identity = 181/261 (69.35%), Postives = 210/261 (80.46%), Query Frame = 1 Query: 1 ALDAFVVDGIRHNIPFVSALMAHSRWQAGQLSTGFIAEEYPDGFHPQAPTGIVGGTIAAVAAAIDHVLGERKRRISGQMTGREVTRDRRRVVRFGGTELLLDVAREAHGIAVHPIDTDGKMGATRVLVSSWKPGDPVWEGFVDGEAVAVQVRPVANGFALAHRGVEAKAYVYTMLEAEAARLMPVKKPPDTGKFLLCPMPGLVISIAVAQGQEIKAGETLAVVEAMKMQNVLRAERDGTVKTIKANPGDSLAVDAVIMEFA 783 ALD F VDGIRHNIPF+SALM H RW+ G+LSTGFIAEE+P GF +AP G + IAAV AAIDHVLGERKR ISGQM GR+V R+RRR V G +E+ L++AR+A GIAV + DG +G R LVS+WKPG+PVW G VDG A+AVQVRP+ANGF L+HRG+E YVYT EA AARLMP + DTGK LLCPMPGLVIS+ VA+GQE+KAGETLAV+EAMKMQNVLRAERDGTVK I A PG +LAVDA+I+EFA Sbjct: 411 ALDDFYVDGIRHNIPFLSALMDHPRWREGRLSTGFIAEEFPKGFAVRAPEGDIARRIAAVGAAIDHVLGERKRLISGQMDGRQVARERRRAVWLGRSEIALEIARDAEGIAVRFVMPDGTLGPERHLVSAWKPGEPVWHGTVDGTAIAVQVRPIANGFRLSHRGIEVPVYVYTETEAAAARLMPEEAVSDTGKKLLCPMPGLVISVDVAEGQEVKAGETLAVIEAMKMQNVLRAERDGTVKAIHAKPGATLAVDALILEFA 671
BLAST of mRNA_P-wetherbeei_contig12595.1.1 vs. uniprot
Match: A0A4Q7G2G8_9BRAD (Propionyl-CoA carboxylase (Fragment) n=3 Tax=Bradyrhizobium TaxID=374 RepID=A0A4Q7G2G8_9BRAD) HSP 1 Score: 344 bits (882), Expect = 6.410e-115 Identity = 180/261 (68.97%), Postives = 207/261 (79.31%), Query Frame = 1 Query: 1 ALDAFVVDGIRHNIPFVSALMAHSRWQAGQLSTGFIAEEYPDGFHPQAPTGIVGGTIAAVAAAIDHVLGERKRRISGQMTGREVTRDRRRVVRFGGTELLLDVAREAHGIAVHPIDTDGKMGATRVLVSSWKPGDPVWEGFVDGEAVAVQVRPVANGFALAHRGVEAKAYVYTMLEAEAARLMPVKKPPDTGKFLLCPMPGLVISIAVAQGQEIKAGETLAVVEAMKMQNVLRAERDGTVKTIKANPGDSLAVDAVIMEFA 783 ALDAF VDGIRHNIPF+SALM H RW+ G+LSTGFIAEEYP GF + P G + +AAVAAAIDHVLGERKR+ISGQM GR V R+RRR V E+ LDVAREA GIAV I +DG G LVSSW PG+PVW+G +DG+ VA+QVRP+ NGF LAH+G E YV+T EA +ARLMPV DTGK LLCPMPGLV+SIAV++GQE+KAGETLAVVEAMKMQNVLRAERDGTVK + A PG +LAVDA+I+EFA Sbjct: 133 ALDAFYVDGIRHNIPFLSALMNHPRWREGKLSTGFIAEEYPKGFAARPPEGEIARRLAAVAAAIDHVLGERKRQISGQMNGRLVQRERRRAVWLERDEIALDVAREADGIAVRFIGSDGLPGNPHNLVSSWVPGEPVWQGTIDGQFVAMQVRPINNGFRLAHQGFEVPIYVFTEAEATSARLMPVVSAADTGKKLLCPMPGLVVSIAVSEGQEVKAGETLAVVEAMKMQNVLRAERDGTVKKVHAAPGATLAVDALILEFA 393
BLAST of mRNA_P-wetherbeei_contig12595.1.1 vs. uniprot
Match: A0A345ZRU5_9HYPH (Propionyl-CoA carboxylase n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZRU5_9HYPH) HSP 1 Score: 352 bits (903), Expect = 1.460e-114 Identity = 183/261 (70.11%), Postives = 209/261 (80.08%), Query Frame = 1 Query: 1 ALDAFVVDGIRHNIPFVSALMAHSRWQAGQLSTGFIAEEYPDGFHPQAPTGIVGGTIAAVAAAIDHVLGERKRRISGQMTGREVTRDRRRVVRFGGTELLLDVAREAHGIAVHPIDTDGKMGATRVLVSSWKPGDPVWEGFVDGEAVAVQVRPVANGFALAHRGVEAKAYVYTMLEAEAARLMPVKKPPDTGKFLLCPMPGLVISIAVAQGQEIKAGETLAVVEAMKMQNVLRAERDGTVKTIKANPGDSLAVDAVIMEFA 783 ALDAFV+DGIRHNIPF+SALMAH RWQ+G+LSTGFIAEE+P GFHP P G IAAVAAA+DHVLGERKR+ISGQ+ G+ VTR+ +R V G E+ L+V RE IAV G GA R L S WKPGDP+W G +DG+AVAVQVRP+ NGF LA+RGVE KAYVYT EA ARLMPVK+ DTGK +LCPMPGLV+SIAV +GQE+KAGET+AVVEAMKM+NVLRAE DGTVK I A PGDSLAVDAVI+EFA Sbjct: 411 ALDAFVIDGIRHNIPFLSALMAHPRWQSGKLSTGFIAEEFPQGFHPHPPEGERADVIAAVAAAVDHVLGERKRQISGQIAGKAVTRESQRAVWLGEHEVRLEVKRENGTIAVQL----GGQGAWRHLASDWKPGDPIWNGAIDGKAVAVQVRPIPNGFVLAYRGVETKAYVYTEREAAYARLMPVKQAADTGKLVLCPMPGLVVSIAVKEGQEVKAGETVAVVEAMKMENVLRAEIDGTVKKINAKPGDSLAVDAVILEFA 667
BLAST of mRNA_P-wetherbeei_contig12595.1.1 vs. uniprot
Match: A0A258JIV6_9BRAD (Propionyl-CoA carboxylase (Fragment) n=1 Tax=Bradyrhizobium sp. 35-63-5 TaxID=1970326 RepID=A0A258JIV6_9BRAD) HSP 1 Score: 339 bits (869), Expect = 2.720e-114 Identity = 178/261 (68.20%), Postives = 204/261 (78.16%), Query Frame = 1 Query: 1 ALDAFVVDGIRHNIPFVSALMAHSRWQAGQLSTGFIAEEYPDGFHPQAPTGIVGGTIAAVAAAIDHVLGERKRRISGQMTGREVTRDRRRVVRFGGTELLLDVAREAHGIAVHPIDTDGKMGATRVLVSSWKPGDPVWEGFVDGEAVAVQVRPVANGFALAHRGVEAKAYVYTMLEAEAARLMPVKKPPDTGKFLLCPMPGLVISIAVAQGQEIKAGETLAVVEAMKMQNVLRAERDGTVKTIKANPGDSLAVDAVIMEFA 783 ALDAFV+DGIRHNIPF+SALMAH RW++G LSTGFIAEE+P+GFHPQAP G +AAVAAAIDHVLGERKR ISGQMTGR V R+ R V G TE L+V RE IAV D R L S WKPGD +W G ++ VAVQVR + NGFAL++RGVE+K YVYT EA ARLMP+K+ PD GKF+LCPMPGLV+S+AV +GQE+KAGET+AVVEAMKM+NVLRAE DGTVK I A PGDSLAVDAVI+EFA Sbjct: 42 ALDAFVIDGIRHNIPFLSALMAHPRWKSGNLSTGFIAEEFPEGFHPQAPDGERAEVLAAVAAAIDHVLGERKRNISGQMTGRVVVREGNRAVWLGDTEYKLEVKRENGTIAVR--FPDRATSDVRHLASDWKPGDFLWSGTINSHPVAVQVRHLPNGFALSYRGVESKVYVYTEREAAYARLMPIKQAPDMGKFVLCPMPGLVVSVAVTEGQEVKAGETVAVVEAMKMENVLRAEVDGTVKKINAKPGDSLAVDAVIVEFA 300
BLAST of mRNA_P-wetherbeei_contig12595.1.1 vs. uniprot
Match: W3RGV6_9BRAD (Propionyl-CoA carboxylase n=1 Tax=Afipia sp. P52-10 TaxID=1429916 RepID=W3RGV6_9BRAD) HSP 1 Score: 350 bits (897), Expect = 1.290e-113 Identity = 180/261 (68.97%), Postives = 209/261 (80.08%), Query Frame = 1 Query: 1 ALDAFVVDGIRHNIPFVSALMAHSRWQAGQLSTGFIAEEYPDGFHPQAPTGIVGGTIAAVAAAIDHVLGERKRRISGQMTGREVTRDRRRVVRFGGTELLLDVAREAHGIAVHPIDTDGKMGATRVLVSSWKPGDPVWEGFVDGEAVAVQVRPVANGFALAHRGVEAKAYVYTMLEAEAARLMPVKKPPDTGKFLLCPMPGLVISIAVAQGQEIKAGETLAVVEAMKMQNVLRAERDGTVKTIKANPGDSLAVDAVIMEFA 783 ALDAF +DGIRHN+PF+SA+M H RW+ G+LSTGFIAEE+P GF P+AP G V IAAVAAAIDHV+GERKRRISGQM GR VTR+RRR V E+ L+VAR+ GIAV I+ +G+ G LVSSWKPGDP W G + G+ VAVQVRP ANGF LAH+GVE AYV+T EA+AARLMP++ DTGK LLCPMPGLV+SI V++GQE+KAGETLAVVEAMKMQNVLRAERDG VKTI A G +LAVDA I+EFA Sbjct: 411 ALDAFYIDGIRHNVPFLSAVMQHPRWKEGRLSTGFIAEEFPGGFAPRAPEGEVARCIAAVAAAIDHVIGERKRRISGQMIGRPVTRERRRAVWLDRVEIPLEVARDGDGIAVRFIEANGEPGVGATLVSSWKPGDPTWHGTIGGQPVAVQVRPFANGFRLAHQGVEVAAYVFTEFEAQAARLMPLEVKADTGKKLLCPMPGLVVSIDVSEGQEVKAGETLAVVEAMKMQNVLRAERDGVVKTIHAKAGATLAVDAPILEFA 671
BLAST of mRNA_P-wetherbeei_contig12595.1.1 vs. uniprot
Match: UPI001CD74D8D (biotin/lipoyl-binding protein n=1 Tax=Bradyrhizobium sp. BRP20 TaxID=2793822 RepID=UPI001CD74D8D) HSP 1 Score: 334 bits (857), Expect = 6.480e-113 Identity = 171/261 (65.52%), Postives = 203/261 (77.78%), Query Frame = 1 Query: 1 ALDAFVVDGIRHNIPFVSALMAHSRWQAGQLSTGFIAEEYPDGFHPQAPTGIVGGTIAAVAAAIDHVLGERKRRISGQMTGREVTRDRRRVVRFGGTELLLDVAREAHGIAVHPIDTDGKMGATRVLVSSWKPGDPVWEGFVDGEAVAVQVRPVANGFALAHRGVEAKAYVYTMLEAEAARLMPVKKPPDTGKFLLCPMPGLVISIAVAQGQEIKAGETLAVVEAMKMQNVLRAERDGTVKTIKANPGDSLAVDAVIMEFA 783 ALD+F VDGIRHNIPF+SALM H RW+ G+LSTGFIAEE+P GF + P G V IAAV AAIDHVLGERKR+ISGQ+ GR V R+RRR V E+LL+VARE I + ID DGK+G +L S+WKPGDPVW+G +D VAVQVRP+ANG LAH+GVE YV+T EA +ARLMPV DTGK LLCPMPGL++SIAV +GQE+KAGE LAVVEAMKMQNVLRAE+DG VK I A+ G +LA+DA+I+EF+ Sbjct: 10 ALDSFYVDGIRHNIPFLSALMHHPRWREGRLSTGFIAEEFPKGFAVRVPEGEVARRIAAVGAAIDHVLGERKRQISGQLGGRIVQRERRRAVWLDRQEILLEVAREGEAITIRFIDADGKVGKAHLLQSAWKPGDPVWQGTIDDHLVAVQVRPIANGIRLAHQGVEVPVYVWTEAEATSARLMPVTTAADTGKKLLCPMPGLIVSIAVTEGQEVKAGEALAVVEAMKMQNVLRAEQDGAVKKIHASAGATLAIDALILEFS 270
BLAST of mRNA_P-wetherbeei_contig12595.1.1 vs. uniprot
Match: UPI000F7440C3 (biotin/lipoyl-binding protein n=4 Tax=Bradyrhizobium TaxID=374 RepID=UPI000F7440C3) HSP 1 Score: 333 bits (855), Expect = 3.290e-112 Identity = 178/261 (68.20%), Postives = 200/261 (76.63%), Query Frame = 1 Query: 1 ALDAFVVDGIRHNIPFVSALMAHSRWQAGQLSTGFIAEEYPDGFHPQAPTGIVGGTIAAVAAAIDHVLGERKRRISGQMTGREVTRDRRRVVRFGGTELLLDVAREAHGIAVHPIDTDGKMGATRVLVSSWKPGDPVWEGFVDGEAVAVQVRPVANGFALAHRGVEAKAYVYTMLEAEAARLMPVKKPPDTGKFLLCPMPGLVISIAVAQGQEIKAGETLAVVEAMKMQNVLRAERDGTVKTIKANPGDSLAVDAVIMEFA 783 ALDAF VDGIRHNIPF+SALM H RW+ G+LSTGFIAEE+P GF +AP G + +AAV AAIDHVLGERKR+ISGQM GR V R+RRR V E+ LDVARE IAV I DG G LVSSW PG+PVW+G +DG VAVQVR + NGF LAH+G E YV+T EA +ARLMPV DTGK LLCPMPGLV+SIAV +GQEIKAGETLAVVEAMKMQNVLRAERDGTVK I A G +LAVDA+I+EFA Sbjct: 37 ALDAFYVDGIRHNIPFLSALMNHPRWREGRLSTGFIAEEFPKGFSARAPEGEIARRLAAVGAAIDHVLGERKRQISGQMGGRVVLRERRRAVWLDRAEIALDVAREDDAIAVRFIGADGLPGNPHNLVSSWVPGEPVWQGTIDGNFVAVQVRAINNGFRLAHQGFEVPVYVFTETEATSARLMPVVSAADTGKKLLCPMPGLVVSIAVTEGQEIKAGETLAVVEAMKMQNVLRAERDGTVKKIHAAAGATLAVDALILEFA 297
BLAST of mRNA_P-wetherbeei_contig12595.1.1 vs. uniprot
Match: A0A6P1BM57_9BRAD (Propionyl-CoA carboxylase (Fragment) n=2 Tax=Bradyrhizobium TaxID=374 RepID=A0A6P1BM57_9BRAD) HSP 1 Score: 331 bits (848), Expect = 1.110e-111 Identity = 175/261 (67.05%), Postives = 200/261 (76.63%), Query Frame = 1 Query: 1 ALDAFVVDGIRHNIPFVSALMAHSRWQAGQLSTGFIAEEYPDGFHPQAPTGIVGGTIAAVAAAIDHVLGERKRRISGQMTGREVTRDRRRVVRFGGTELLLDVAREAHGIAVHPIDTDGKMGATRVLVSSWKPGDPVWEGFVDGEAVAVQVRPVANGFALAHRGVEAKAYVYTMLEAEAARLMPVKKPPDTGKFLLCPMPGLVISIAVAQGQEIKAGETLAVVEAMKMQNVLRAERDGTVKTIKANPGDSLAVDAVIMEFA 783 ALDAF VDGIRHNIPF+SALM H RW+ G+LSTGFIAEE+P GF +AP G + +AAV AAIDHVLGERKR+ISGQM GR V R+RRR V E+ LDVARE+ I V I DG G LVSSW PG+PVW+G +DG VAVQVR + NGF LAH+G E YV+T EA +A+LMPV DTGK LLCPMPGLV+SIAV +GQE+KAGETLAVVEAMKMQNVLRAERDGTVK I A G +LAVDA+I+EFA Sbjct: 1 ALDAFYVDGIRHNIPFLSALMNHPRWREGRLSTGFIAEEFPKGFSARAPEGEIARRLAAVGAAIDHVLGERKRQISGQMGGRVVLRERRRAVWLERAEIALDVARESDAITVRFIGADGLPGNPHNLVSSWVPGEPVWQGTIDGNFVAVQVRAINNGFRLAHQGFEVPVYVFTETEATSAQLMPVVSAADTGKKLLCPMPGLVVSIAVTEGQEVKAGETLAVVEAMKMQNVLRAERDGTVKKIHAAAGATLAVDALILEFA 261 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12595.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12595.1.1 >prot_P-wetherbeei_contig12595.1.1 ID=prot_P-wetherbeei_contig12595.1.1|Name=mRNA_P-wetherbeei_contig12595.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=262bp ALDAFVVDGIRHNIPFVSALMAHSRWQAGQLSTGFIAEEYPDGFHPQAPTback to top mRNA from alignment at P-wetherbeei_contig12595:232..1017+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12595.1.1 ID=mRNA_P-wetherbeei_contig12595.1.1|Name=mRNA_P-wetherbeei_contig12595.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig12595:232..1017+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12595:232..1017+ >mRNA_P-wetherbeei_contig12595.1.1 ID=mRNA_P-wetherbeei_contig12595.1.1|Name=mRNA_P-wetherbeei_contig12595.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig12595:232..1017+ (Phaeothamnion wetherbeei SAG_119_79)back to top |