mRNA_P-wetherbeei_contig1256.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1256.2.1 vs. uniprot
Match: A0A2V0P648_9CHLO (Ig-like domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P648_9CHLO) HSP 1 Score: 72.8 bits (177), Expect = 2.060e-12 Identity = 44/121 (36.36%), Postives = 63/121 (52.07%), Query Frame = 1 Query: 25 PPLLFSVEAAGTYERRRVHGYGHLALPRVPGAYDLLVQTWRPVGTVRQRLQDWHIGGARRLADPSYAGAWPSNSAATATPAGP--AAAGDAATGRGTFLSKLGFRTEPAGNVRIRLYVVEQ 381 P L V + ++R GYG L PG+ VQTW+P+GT R R Q++ IGG+ LADPSY + AA P G G G ++K GF+T +G V++RL+ ++Q Sbjct: 431 PVLTLQVCSYDNWDRYTCEGYGWTQLDASPGSAARCVQTWKPLGTRRDRQQEFFIGGSLELADPSYVALKAPSEAAGGAPLGAILGGGGRGRAGGAPGVNKYGFQTVSSGRVKLRLHCLQQ 551
BLAST of mRNA_P-wetherbeei_contig1256.2.1 vs. uniprot
Match: A0A1Y1I4J4_KLENI (B9 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I4J4_KLENI) HSP 1 Score: 72.0 bits (175), Expect = 3.450e-12 Identity = 44/114 (38.60%), Postives = 58/114 (50.88%), Query Frame = 1 Query: 25 PPLLFSVEAAGTYERRRVHGYGHLALP-RVPGAYDLLVQTWRPVGTVRQRLQDWHIGGARRLADPSYAGAWPSNSAATATPAGPAAAGDAATGRGTFLSKLGFRTEPAGNVRIR 363 P L F V + ++R R GYG+LAL PG + +V TWRPVG+VRQ+L + +GG +L D +Y G LSK GFRT+PAG V+IR Sbjct: 300 PILYFHVASYDRWDRCRPEGYGYLALAGHCPGTREHVVDTWRPVGSVRQQLHSFFVGGGPQLRDVTYVR-------------------QPVDWAGPVLSKYGFRTQPAGQVKIR 394
BLAST of mRNA_P-wetherbeei_contig1256.2.1 vs. uniprot
Match: A0A8J2WX94_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WX94_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 7.340e-10 Identity = 46/119 (38.66%), Postives = 57/119 (47.90%), Query Frame = 1 Query: 25 PPLLFSVEAAGTYERRRVHGYGHLALPRVPGAYDL-LVQTWRPVGTVRQRLQDWHIGGARRLADPSYAGAWPSNSAATATPAGPAAAGDAATGRGTFLSKLGFRTEPAGNVRIRLYVVE 378 P +V A +ER V GYGH LP P +QTW PVG +R +LQD+ +GGA RL D YA A P + P +G FL K GF T AG + +R VE Sbjct: 502 PRCYVAVFARRRFERHTVEGYGHFRLPAKPQPLSRERLQTWAPVGRIRDQLQDFFLGGAHRLKDLRYA-AHPPDEWGAHPDRPPKDSG--------FLCKFGFMTRAAGCIDVRCGAVE 611
BLAST of mRNA_P-wetherbeei_contig1256.2.1 vs. uniprot
Match: A0A836BAV3_9CHLO (Ig-like domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BAV3_9CHLO) HSP 1 Score: 65.1 bits (157), Expect = 1.040e-9 Identity = 45/131 (34.35%), Postives = 61/131 (46.56%), Query Frame = 1 Query: 19 GGPP--------LLFSVEAAGTYERRRVHGYGHLALPR--VPGAYDLLVQTWRPVGTVRQRLQDWHIGGARRLADPSYAGAWPSNSAATATPAGPAAAGDAATGRGTFLSKLGFRTEPAGNVRIRLYVVEQ 381 GGPP + F V R GYG LAL VPGA + TWRP+GT+R + ++ +GG+ LAD +Y TP+G G L+K GF+TE G +++RL V Q Sbjct: 938 GGPPPAANKLPVMFFQVCTLDKLNRYTSQGYGWLALADAGVPGAATHRIATWRPLGTIRDKRDEFFVGGSAELADLAY----------LTTPSG---------FNGRILNKYGFKTESVGALKVRLNTVAQ 1049
BLAST of mRNA_P-wetherbeei_contig1256.2.1 vs. uniprot
Match: A0A7S3H9I5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9I5_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.490e-9 Identity = 35/117 (29.91%), Postives = 58/117 (49.57%), Query Frame = 1 Query: 25 PPLLFSVEAAGTYERRRVHGYGHLALPRVPGAYDLLVQTWRPVGTVRQRLQDWHIGGARRLADPSYAGAWPSNSAATATPAGPAAAGDAATGRGTFLSKLGFRTEPAGNVRIRLYVV 375 P ++F V + R ++ GYG L PG++DL ++TWRPVG +R ++QD+ +G A L D + D+ + L++ G T +G+VRIR++ V Sbjct: 400 PTMVFQVFSTDWLGRHKLEGYGFHHLSDQPGSHDLEIRTWRPVGRIRDQMQDFFLGNAAYLKDEHFV--------------------DSVNKTASALNRFGVLTHSSGSVRIRVHTV 496
BLAST of mRNA_P-wetherbeei_contig1256.2.1 vs. uniprot
Match: A0A2K3D211_CHLRE (Ig-like domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D211_CHLRE) HSP 1 Score: 63.9 bits (154), Expect = 2.640e-9 Identity = 45/131 (34.35%), Postives = 61/131 (46.56%), Query Frame = 1 Query: 19 GGPP--------LLFSVEAAGTYERRRVHGYGHLALPR--VPGAYDLLVQTWRPVGTVRQRLQDWHIGGARRLADPSYAGAWPSNSAATATPAGPAAAGDAATGRGTFLSKLGFRTEPAGNVRIRLYVVEQ 381 GGPP + F V R GYG LAL VPGA V+TWRP+GT+R + ++ +GG+ L D +Y TP+G G L+K GF+TE G +++RL V Q Sbjct: 886 GGPPPAANKLPAMFFQVCTLDKLNRYTSQGYGWLALADAGVPGAATHRVKTWRPLGTIRDKRNEFFVGGSAELNDLAY----------LTTPSG---------FNGRILNKYGFKTESVGALKVRLNTVAQ 997
BLAST of mRNA_P-wetherbeei_contig1256.2.1 vs. uniprot
Match: A8JDM5_CHLRE (Centriole proteome protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8JDM5_CHLRE) HSP 1 Score: 63.9 bits (154), Expect = 2.670e-9 Identity = 45/131 (34.35%), Postives = 61/131 (46.56%), Query Frame = 1 Query: 19 GGPP--------LLFSVEAAGTYERRRVHGYGHLALPR--VPGAYDLLVQTWRPVGTVRQRLQDWHIGGARRLADPSYAGAWPSNSAATATPAGPAAAGDAATGRGTFLSKLGFRTEPAGNVRIRLYVVEQ 381 GGPP + F V R GYG LAL VPGA V+TWRP+GT+R + ++ +GG+ L D +Y TP+G G L+K GF+TE G +++RL V Q Sbjct: 946 GGPPPAANKLPAMFFQVCTLDKLNRYTSQGYGWLALADAGVPGAATHRVKTWRPLGTIRDKRNEFFVGGSAELNDLAY----------LTTPSG---------FNGRILNKYGFKTESVGALKVRLNTVAQ 1057
BLAST of mRNA_P-wetherbeei_contig1256.2.1 vs. uniprot
Match: A0A061RT25_9CHLO (Meckel syndrome type 1 protein n=3 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RT25_9CHLO) HSP 1 Score: 58.9 bits (141), Expect = 1.450e-7 Identity = 39/121 (32.23%), Postives = 59/121 (48.76%), Query Frame = 1 Query: 25 PPLLFSVEAAGTYERRRVHGYGHLALPRVP--GAYDLLVQTWRPVGTVRQRLQDWHIGGARRLADPSYAGAWPSNSAATATPAGPAAAGDAATGRGTFLSKLGFRTEPAGNVRIRLYVVEQ 381 P + F V + R V GY L+L V G + TWRP+G+V+ RL + +GG+ L D +YAG P + +G FLSK GF++E +G +++R Y + Q Sbjct: 457 PVIYFQVNTYDAWGRYTVQGYTWLSLHCVGRGGCSAHSLATWRPLGSVQDRLHGFFVGGSAELKDMTYAGV-PRDF------------------QGGFLSKFGFKSETSGTLKVRAYAMRQ 558
BLAST of mRNA_P-wetherbeei_contig1256.2.1 vs. uniprot
Match: UPI000719C6F7 (B9 domain-containing protein 2-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719C6F7) HSP 1 Score: 56.6 bits (135), Expect = 2.470e-7 Identity = 24/66 (36.36%), Postives = 39/66 (59.09%), Query Frame = 1 Query: 19 GGPPLLFSVEAAGTYERRRVHGYGHLALPRVPGAYDLLVQTWRPVGTVRQRLQDWHIGGARRLADP 216 G P F V T+ R ++GYG +P PG ++L TWRPVG++R+++ + +GG +L +P Sbjct: 72 GWPKFHFQVWHQDTFGRNELYGYGFCHVPTSPGIHELECATWRPVGSLREQISQYFLGGGLQLRNP 137
BLAST of mRNA_P-wetherbeei_contig1256.2.1 vs. uniprot
Match: UPI001E2779E5 (B9 domain-containing protein 2 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E2779E5) HSP 1 Score: 56.6 bits (135), Expect = 2.510e-7 Identity = 26/68 (38.24%), Postives = 39/68 (57.35%), Query Frame = 1 Query: 13 VTGGPPLLFSVEAAGTYERRRVHGYGHLALPRVPGAYDLLVQTWRPVGTVRQRLQDWHIGGARRLADP 216 + G P L V R + GYG L +P +PG +DL TWRPVGT++++L + +GG +L +P Sbjct: 70 IQGWPKLYLQVYHLDWLGRSHLFGYGLLTIPTLPGQHDLDCYTWRPVGTLQEKLVQFFLGGGPQLKNP 137 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1256.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1256.2.1 >prot_P-wetherbeei_contig1256.2.1 ID=prot_P-wetherbeei_contig1256.2.1|Name=mRNA_P-wetherbeei_contig1256.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=127bp MASLVTGGPPLLFSVEAAGTYERRRVHGYGHLALPRVPGAYDLLVQTWRPback to top mRNA from alignment at P-wetherbeei_contig1256:6965..7345+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1256.2.1 ID=mRNA_P-wetherbeei_contig1256.2.1|Name=mRNA_P-wetherbeei_contig1256.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig1256:6965..7345+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1256:6965..7345+ >mRNA_P-wetherbeei_contig1256.2.1 ID=mRNA_P-wetherbeei_contig1256.2.1|Name=mRNA_P-wetherbeei_contig1256.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig1256:6965..7345+ (Phaeothamnion wetherbeei SAG_119_79)back to top |