mRNA_P-wetherbeei_contig12495.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12495.1.1 vs. uniprot
Match: A0A0G4GX11_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GX11_VITBC) HSP 1 Score: 65.1 bits (157), Expect = 3.370e-10 Identity = 47/110 (42.73%), Postives = 64/110 (58.18%), Query Frame = 1 Query: 31 AARGRRRLGLWSSVAWTTLTGHLLAGEERISVIW-----EGIPSDSDSGSRNGREAGGG-SGGEGSSSGGD-VWLDMYSVSAPAGVLGKLAWPFVRPMQKAFFQGIAENM 339 AAR R ++++V ++T+ GHLLAGEER +V W +G P G R R A S G+G S D VW ++YS S P+GVLG+LA VRP+Q+ F +A M Sbjct: 149 AARPSGREVVYTAVGYSTVKGHLLAGEERFTVAWNQTPRKGGPVSRIFGLRKQRPANDSDSEGDGIESEKDGVWFEVYSYSRPSGVLGRLAAVAVRPLQRRFAADLAAKM 258
BLAST of mRNA_P-wetherbeei_contig12495.1.1 vs. uniprot
Match: L1JWA7_GUITC (DUF1990 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JWA7_GUITC) HSP 1 Score: 57.0 bits (136), Expect = 3.930e-8 Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 1 Query: 91 GHLLAGEERISVIWEGI-PSDSDSGSRNGREAGGGSGGEGSSSGGDVWLDMYSVSAPAGVLGKLAWPFVRPMQKAFFQGIAENM 339 GHL+ GEER++V+W+G PS S S GR V+ + SVSA +G++G L +PF+RPMQ FF ++M Sbjct: 41 GHLIRGEERLAVLWDGYEPSKDPSSSELGR----------------VYFAIRSVSAGSGLVGSLLFPFMRPMQDRFFASQLDSM 108
BLAST of mRNA_P-wetherbeei_contig12495.1.1 vs. uniprot
Match: W7TFL2_9STRA (DUF1990 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFL2_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 9.910e-7 Identity = 37/98 (37.76%), Postives = 47/98 (47.96%), Query Frame = 1 Query: 46 RRLGLWSSVAWTTLTGHLLAGEERISVIWEGIPSDSDSGSRNGREAGGGSGGEGSSSGGDVWLDMYSVSAPAGVLGKLAWPFVRPMQKAFFQGIAENM 339 +R G ++VA +TL GHLL GEER V +EG GR+ GDVW D+ S S A LG+L P VRP+Q F + M Sbjct: 298 KRGGAVAAVAVSTLRGHLLEGEERFCVWFEG-----------GRQ-------------GDVWFDVLSFSKGAFPLGRLLMPVVRPLQNRFLVDVGRAM 371
BLAST of mRNA_P-wetherbeei_contig12495.1.1 vs. uniprot
Match: A0A7S4N191_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N191_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 1.410e-6 Identity = 39/104 (37.50%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 55 GLWSSVAWTTLTGHLLAGEERISVIWEGIPSDSDSGSRNGREAGGGSGGEGS-----------SSGGDVWLDM----YSVSAPAGVLGKLAWPFVRPMQKAFFQ 321 GL++S A+ TL GHLL+GEER++V + + GS GR + +GG + + GG+ ++D+ YS +AP+ ++GKLAWP V MQ FF+ Sbjct: 379 GLYTSTAYATLRGHLLSGEERVTVAFR------NGGSVGGRSSLSDAGGSAAVAPLLRADGFGTGGGEGYVDVEILSYSRAAPS-IMGKLAWPLVGRMQDRFFR 475
BLAST of mRNA_P-wetherbeei_contig12495.1.1 vs. uniprot
Match: A0A7S4NRR5_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NRR5_GUITH) HSP 1 Score: 54.3 bits (129), Expect = 1.510e-6 Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 1 Query: 64 SSVAWTTLTGHLLAGEERISVIWEGI-PSDSDSGSRNGREAGGGSGGEGSSSGGDVWLDMYSVSAPAGVLGKLAWPFVR 297 S VA++TL GHL+ GEER++V+W+G PS S S GR V+ + SVSA +G++G L +PF+R Sbjct: 130 SQVAYSTLQGHLIRGEERLAVLWDGYEPSKDPSSSELGR----------------VYFAIRSVSAGSGLVGSLLFPFMR 192
BLAST of mRNA_P-wetherbeei_contig12495.1.1 vs. uniprot
Match: A0A7S2Q3S0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q3S0_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 1.060e-5 Identity = 33/92 (35.87%), Postives = 46/92 (50.00%), Query Frame = 1 Query: 64 SSVAWTTLTGHLLAGEERISVIWEGIPSDSDSGSRNGREAGGGSGGEGSSSGGDVWLDMYSVSAPAGVLGKLAWPFVRPMQKAFFQGIAENM 339 SS ++ TL GHLLAGEER+SVI G + DV + +S SAP+ + G++ WPF+ MQK FF E++ Sbjct: 219 SSASYATLDGHLLAGEERVSVILRGNDAV------------------------DVEIVSFSRSAPS-INGRIVWPFIGRMQKQFFLKEMEHL 285
BLAST of mRNA_P-wetherbeei_contig12495.1.1 vs. uniprot
Match: A0A6V2FB26_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2FB26_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 2.820e-5 Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = 1 Query: 61 WSSVAWTTLTGHLLAGEERISVIWEGIPSDSDSGSRNGREAGGGSGGEGSSSGGDVWLDMYSVSAPAGVLGKLAWPFVRPMQKAFFQ 321 ++S A+ TL GHLL+GEER++V+ S+SD+ + E GSGG DV + +S +AP+ LGKL WP + MQ FF+ Sbjct: 214 YTSTAYATLRGHLLSGEERVTVVLRDKKSNSDN---DVLEDDDGSGGGYV----DVEIISFSRAAPS-PLGKLVWPLIGKMQDKFFR 292
BLAST of mRNA_P-wetherbeei_contig12495.1.1 vs. uniprot
Match: W7TBY2_9STRA (DUF1990 domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBY2_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 2.910e-5 Identity = 33/88 (37.50%), Postives = 48/88 (54.55%), Query Frame = 1 Query: 58 LWSSVAWTTLTGHLLAGEERISVIWEGIPSDSDSGSRNGREAGGGSGGEGSSSGGDVWLDMYSVSAPAGVLGKLAWPFVRPMQKAFFQ 321 +WS+VA+TT+ HL+AGEER+ VIW P GR G +VW ++ SV+ G +G+L +P + MQ+ FFQ Sbjct: 247 VWSAVAYTTVGRHLIAGEERMRVIW--YPR--------GRXXXXXXXXXGED---EVWFEIVSVARGNGWVGRLLFPSTQRMQRHFFQ 321
BLAST of mRNA_P-wetherbeei_contig12495.1.1 vs. uniprot
Match: A0A4D9CTF5_9STRA (DUF1990 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTF5_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 3.050e-5 Identity = 34/91 (37.36%), Postives = 49/91 (53.85%), Query Frame = 1 Query: 49 RLGLWSSVAWTTLTGHLLAGEERISVIWEGIPSDSDSGSRNGREAGGGSGGEGSSSGGDVWLDMYSVSAPAGVLGKLAWPFVRPMQKAFFQ 321 R +WS+VA+TT+ HL+AGEER+ VIW P GR G +VW ++ SV+ G +G+L +P + MQ+ FFQ Sbjct: 318 RARVWSAVAYTTVGRHLIAGEERMRVIW--YPR--------GRGXXXXXXXXGED---EVWFEIVSVARGNGWVGRLLFPSTQRMQRHFFQ 395 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12495.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12495.1.1 >prot_P-wetherbeei_contig12495.1.1 ID=prot_P-wetherbeei_contig12495.1.1|Name=mRNA_P-wetherbeei_contig12495.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=113bp RGGNGDGGGGAARGRRRLGLWSSVAWTTLTGHLLAGEERISVIWEGIPSDback to top mRNA from alignment at P-wetherbeei_contig12495:111..449+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12495.1.1 ID=mRNA_P-wetherbeei_contig12495.1.1|Name=mRNA_P-wetherbeei_contig12495.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig12495:111..449+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12495:111..449+ >mRNA_P-wetherbeei_contig12495.1.1 ID=mRNA_P-wetherbeei_contig12495.1.1|Name=mRNA_P-wetherbeei_contig12495.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig12495:111..449+ (Phaeothamnion wetherbeei SAG_119_79)back to top |