mRNA_P-wetherbeei_contig12463.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12463.1.1 vs. uniprot
Match: D8LDD4_ECTSI (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDD4_ECTSI) HSP 1 Score: 108 bits (269), Expect = 7.040e-26 Identity = 71/157 (45.22%), Postives = 91/157 (57.96%), Query Frame = 1 Query: 22 IELPKPFGILLEEVSGG--GVRVEGLIDGGNAKKSGKITPGMRLLTIAGRDYSTSTFDEVMATLVKEEA--PVSLTFTASAKPLARALEEEARREPPVAGRTTAVLTVIAPGGGSPKDIKAVVGANLRRVLLDNKVQLYDFVGTVSNCNGAGQCGSC 480 + LPKP GI LEEV G GVRV G+++GG AK+SG+I M LL I G+D +++ FD VM TLV A P+ L F + P VA LTV GG + +KA G NLR+ LL KV++YD VG ++NCNG GQCG+C Sbjct: 61 VSLPKPLGIQLEEVVPGSPGVRVAGVVEGGTAKESGEIGADMILLEIGGKDVTSAMFDLVMDTLVAAPAGVPIDLVFRDPSAAAXXXXXXXXXXXPAVAMGVPCELTV---GGVT---LKAKTGDNLRKTLLAGKVEVYDMVGKMTNCNGGGQCGTC 211
BLAST of mRNA_P-wetherbeei_contig12463.1.1 vs. uniprot
Match: A0A836CP36_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP36_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 6.420e-22 Identity = 62/158 (39.24%), Postives = 92/158 (58.23%), Query Frame = 1 Query: 22 IELPKPFGILLEEVSGG---GVRVEGLIDGGNAKKSGKITPGMRLLTIAGRDYSTSTFDEVMATLV--KEEAPVSLTFTASAKPLARALEEEARREPPVAGRTTAVLTVIAPGGGSPKDIKAVVGANLRRVLLDNKVQLYDFVGTVSNCNGAGQCGSC 480 + LPKP GI LEE+ G GVRV+ + +GG+A KSG + PGM L+++ G D +T FD +M L+ + P+ L+F+ LE + + P L V+ P G + +KA G NLR+VL+ KV +Y+ + ++NCNGAGQCG+C Sbjct: 43 VSLPKPLGIALEELQPGKPAGVRVQEVREGGSAIKSGDVLPGMVLVSLNGIDCTTKDFDTIMDMLIGATDSQPIQLSFS---------LEVDDEQIPQPIKTGPCELHVLLPKGETMV-LKARNGDNLRKVLMAGKVSIYEGLAVMTNCNGAGQCGTC 190
BLAST of mRNA_P-wetherbeei_contig12463.1.1 vs. uniprot
Match: A0A7S4BLD9_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BLD9_CHRCT) HSP 1 Score: 94.0 bits (232), Expect = 8.640e-20 Identity = 65/168 (38.69%), Postives = 93/168 (55.36%), Query Frame = 1 Query: 1 MSTESIIIELPKPFGILLEEVSGG-GVRVEGLIDGGNAKKSGKITPGMRLLTIAGRDYSTSTFDEVMATLVKEEAPVSL------TFTA-SAKPLARALEEEARREPPVAGRTTAVLTVIAPGGGSPKDIKAVVGANLRRVLLDNKVQLYDFVGTVSNCNGAGQCGSC 480 ++T S+ ++LPKP G+LLEE +GG G V LI+GG+A S + G +++I G+D S++ FDE+M L V L T TA SA A + + A+ + A IA GG I+ G LR+VL DNK +LY +G ++NC G GQCG+C Sbjct: 151 LTTTSVSVQLPKPLGVLLEERAGGAGAEVASLIEGGSALSSNLVFEGDVVVSIDGKDVSSTGFDEIMEMLGDAGEIVDLVLERQVTDTAESAAGAAETVTKSAQVDEEEAPEPMPATATIAIEGGQA--IEVPTGQLLRKVLQDNKQELYSLMGKMTNCGGVGQCGTC 316
BLAST of mRNA_P-wetherbeei_contig12463.1.1 vs. uniprot
Match: A0A7S3YA98_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YA98_HETAK) HSP 1 Score: 90.5 bits (223), Expect = 4.340e-19 Identity = 62/173 (35.84%), Postives = 92/173 (53.18%), Query Frame = 1 Query: 4 STESIIIELPKPFGILLEEVSGG---GVRVEGLIDGGNAKKSGKITPGMRLLTIAGRDYSTSTFDEVMATLVKEEAPVSLTFTASA-----------KPLARALEEEARREPPVAGRTTAVLTVIAPGGGSPKDIKAVVGANLRRVLLDNKVQLYDFVGTVSNCNGAGQCGSC 480 S ++ + L KP G++LEEV G GV + + G+A + G+I GMRLL + G+D ++ TFDEVM L+ + V +T +S+ +PL E+ EPP G VI G + + GANLR+ LL N V++Y + ++NCNG GQCG+C Sbjct: 48 SQDAQVFSLAKPMGLVLEEVEEGKASGVSIVDINPDGSAGRIGEIQKGMRLLAVNGQDCTSCTFDEVMDKLIAADGEVQVTLQSSSPKQTLVVPDAIQPLEAPKEKV---EPPPEGP----FEVIVLNGEEKRVLTIQAGANLRKELLANGVEVYAGMAKLTNCNGGGQCGTC 213
BLAST of mRNA_P-wetherbeei_contig12463.1.1 vs. uniprot
Match: A0A7S2FMP7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FMP7_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.120e-17 Identity = 64/160 (40.00%), Postives = 79/160 (49.38%), Query Frame = 1 Query: 16 IIIELPKPFGILLEE-VSGGGVRVEGLIDGGNAKKSGKITPGMRLLTIAGRDYSTSTFDEVMATLVKEEAPVSLTF----TASAKPLARALEEEARREPPVAGRTTAVLTVIAPGGGSPKDIKAVVGANLRRVLLDNKVQLYDFVGTVSNCNGAGQCGSC 480 I +E+PKP GI+ EE SGGG+ V L++G NA KS I G L+ + G +FDE M L+ +LTF + P TA LTV+A G K I G LR VLL+N V LY G SNCNGAGQCG+C Sbjct: 51 IEVEIPKPMGIVFEENASGGGLYVFELVEG-NAAKSAVIEAGDNLVAVEGSSVVGLSFDEAMDKLMAAPPVAALTFFRGDLSDMAPPTXXXXXXXXXXXXXXXXXTAELTVLAEGSPEVK-ITTQAGTILRNVLLENGVSLYTLWGAASNCNGAGQCGTC 208
BLAST of mRNA_P-wetherbeei_contig12463.1.1 vs. uniprot
Match: A0A7S1XJK9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJK9_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 2.460e-16 Identity = 62/173 (35.84%), Postives = 83/173 (47.98%), Query Frame = 1 Query: 22 IELPKPFGILLEEV----SGGGVRVEGLIDGGNAKKSGKITPGMRLLTIAGRDYSTSTFDEVMATLVKEEAPVSLTFTASAKPLARALEEEARREPPVAGRTTAVLTVIAPGGGSPKDI--------------KAVV--GANLRRVLLDNKVQLYDFVGTVSNCNGAGQCGSC 480 ++L KP G++LEE + GV V L G A + G++ GM LL +AG+D +TFDE M L+ + V L A P A + E E P A V AP +D+ K V G LR L +KV +YD +G V+NCNGAGQCG+C Sbjct: 67 VQLEKPLGMVLEEAGEEGAAAGVVVVELAPDGAAARDGRVREGMALLEVAGQDVGAATFDEAMDALIGAPSVVELVLQGEA-PAPAAEQVEPEEEVPAA----VAEDVPAPAADDAEDVDDGRPASVVVDGSTKITVERGEILRNALRGSKVDVYDLMGKVTNCNGAGQCGTC 234
BLAST of mRNA_P-wetherbeei_contig12463.1.1 vs. uniprot
Match: A0A7S2BPU3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BPU3_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 3.510e-15 Identity = 61/155 (39.35%), Postives = 74/155 (47.74%), Query Frame = 1 Query: 31 PKPFGILLEE-VSGGGVRVEGLIDGGNAKKSGKITPGMRLLTIAGRDYSTSTFDEVMATLVKEEAPVSLTF----TASAKPLARALEEEARREPPVAGRTTAVLTVIAPGGGSPKDIKAVVGANLRRVLLDNKVQLYDFVGTVSNCNGAGQCGSC 480 PKP I+ EE SGGG+ V L++G NA KS I G L+ + G +FDE M L+ +LTF + P TA LTV+A G K I G LR VLL+N V LY G SNCNGAGQCG+C Sbjct: 1 PKPMCIVFEENASGGGLYVFELVEG-NAAKSAVIEAGDNLVAVEGSSVVGLSFDEAMDKLMAAPPVAALTFFRGDLSDMAPPTXXXXXXXXXXXXXXXXXTAELTVLAEGSPEVK-ITTQAGTILRNVLLENGVSLYTLWGAASNCNGAGQCGTC 153
BLAST of mRNA_P-wetherbeei_contig12463.1.1 vs. uniprot
Match: A0A8J5XJU3_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJU3_DIALT) HSP 1 Score: 79.0 bits (193), Expect = 1.060e-14 Identity = 63/178 (35.39%), Postives = 84/178 (47.19%), Query Frame = 1 Query: 13 SIIIELPKPFGILLEEVSGGG----VRVEGLIDGGNAKKSGKITPGMRLLTIAGRDYSTSTFDEVMATLVKEEAPVSLTFT----------ASAKPLARALEEEARREPPVAG-------RTTAVLTVIAPGGGSPKD-IKAVVGANLRRVLLDNKVQLYDFVGTVSNCNGAGQCGSC 480 ++ I LPKP G++LEEV+ V V ++DGG+A SG I GMRLL++ D +T + M+ +V E V L T A A PL R P R A ++V G P + GA LR LL KV +Y VG ++NC GAGQCG+C Sbjct: 49 TVAIALPKPLGLVLEEVADTAGAPFVLVAEVVDGGSAASSGAIRTGMRLLSV--NDVATLELEPAMSLIVAAEGDVRLVLTSDAPAARQTAAVAPPLTPPXXXXXXRAAPAXXXXXXXPPRGPATVSVTVQQSGKPDTRLPMPQGAILRTELLKAKVDVYTMVGKMTNCGGAGQCGTC 224
BLAST of mRNA_P-wetherbeei_contig12463.1.1 vs. uniprot
Match: B5Y5K8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y5K8_PHATC) HSP 1 Score: 75.9 bits (185), Expect = 1.290e-13 Identity = 54/157 (34.39%), Postives = 83/157 (52.87%), Query Frame = 1 Query: 22 IELPKPFGILLEEVSGG---GVRVEGLIDGGNAKKSGKITPGMRLLTIAGRDYSTSTFDEVMATLVKEEAPVSLTFTASAKPLARALEEEARREPPVAGRTTAVLTVIAPGGGSPKDIKAVVGANLRRVLLDNKVQLYDFVGT-VSNCNGAGQCGSC 480 + L KP G++LEEV G GV V+ + + G++ G++L+T+AG D ++ TFDEVM ++ V L + + + EE++ P T+V + G DI+ VG NLR+VLLDN V++Y + + NC G GQC C Sbjct: 60 LSLVKPLGMILEEVEEGAAKGVFVKEVAEEGSSVPYADEIVGLKLITVAGEDVTSLTFDEVMDKIINSPETVDLRLVSMNEIDSVDAEEDSA---PAFEIGTSVTIKLLQEGKDDLDIETKVGDNLRQVLLDNSVEVYQGMKQKLGNCGGGGQCTFC 213
BLAST of mRNA_P-wetherbeei_contig12463.1.1 vs. uniprot
Match: A0A7S2W1W1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W1W1_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.640e-11 Identity = 55/168 (32.74%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 MSTESIIIELPKPFGILLEEVSGG---GVRVEGLIDGGNAKKSGKITP--GMRLLTIAGRDYSTSTFDEVMATLVKEEAPVSLTFTA--SAKPLARALEEEARREPPVAGRTTAVLTVIAPGGGSPKDIKAVVGANLRRVLLDNKVQLY-DFVGTVSNCNGAGQCGSC 480 +S + + +EL KP G+LLEE GV+VE L++ G+A S G+++ + G + FD+VM ++ +PV++ F ++ L + + E P T + VI G + KDI A VG NLR+ LL+NKV++Y + NC G+G C C Sbjct: 48 VSNKFLSLELEKPLGMLLEENEENEAKGVKVEELVETGSAYASEYKDQLVGLKIAKVNGENVLNIGFDDVMERIIDSPSPVAIDFELELASSDLEASGDSEDPSVPVYDIGQTVTIRVIQEGSET-KDIAAKVGNNLRKTLLENKVEVYRGLKKKLGNCGGSGTCAFC 214 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12463.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12463.1.1 >prot_P-wetherbeei_contig12463.1.1 ID=prot_P-wetherbeei_contig12463.1.1|Name=mRNA_P-wetherbeei_contig12463.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=160bp MSTESIIIELPKPFGILLEEVSGGGVRVEGLIDGGNAKKSGKITPGMRLLback to top mRNA from alignment at P-wetherbeei_contig12463:10..845- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12463.1.1 ID=mRNA_P-wetherbeei_contig12463.1.1|Name=mRNA_P-wetherbeei_contig12463.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=836bp|location=Sequence derived from alignment at P-wetherbeei_contig12463:10..845- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12463:10..845- >mRNA_P-wetherbeei_contig12463.1.1 ID=mRNA_P-wetherbeei_contig12463.1.1|Name=mRNA_P-wetherbeei_contig12463.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=480bp|location=Sequence derived from alignment at P-wetherbeei_contig12463:10..845- (Phaeothamnion wetherbeei SAG_119_79)back to top |