mRNA_P-wetherbeei_contig12384.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12384.1.1 vs. uniprot
Match: A0A836CM67_9STRA (Tctex-1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM67_9STRA) HSP 1 Score: 181 bits (458), Expect = 7.300e-57 Identity = 81/115 (70.43%), Postives = 96/115 (83.48%), Query Frame = 1
Query: 1 SEQLAFIPEQVESLLMRAVEGVLKNEVYDESKVSQWVDSICDRSMLQLQELNKPFKYVVSCAIVQKCGAGFHAAHSAYWDISGDNMCQVSWPTEKMREQQGSRMKCIITAFGLSL 345
SEQ AF+PEQVE +LM A++ VLKNEVY E+K WVDSICD+ M L LNKPFKY+V+ A++QK GAG HA HSA+WDI DN+CQVSWPT+KMREQQGSR+KCI+TAFGLSL
Sbjct: 6 SEQTAFLPEQVEGILMAAIDAVLKNEVYVEAKAQHWVDSICDKCMAGLHSLNKPFKYIVTAAVIQKNGAGVHAGHSAFWDIGSDNLCQVSWPTDKMREQQGSRIKCIVTAFGLSL 120
BLAST of mRNA_P-wetherbeei_contig12384.1.1 vs. uniprot
Match: D8LG53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG53_ECTSI) HSP 1 Score: 142 bits (358), Expect = 5.640e-42 Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = 1
Query: 1 SEQLAFIPEQVESLLMRAVEGVLKNEVYDESKVSQWVDSICDRSMLQLQELNKPFKYVVSCAIVQKCGAGFHAAHSAYWDISGDNMCQV 267
SEQLAFIPEQVES+LM V+G+L+ EVY E KVS WV++ICDRSM +L +L+KPFKYVVSC IVQK GAGFH HSAYWDIS DN+CQV
Sbjct: 6 SEQLAFIPEQVESILMTVVDGILRTEVYLEEKVSHWVNTICDRSMQELHDLSKPFKYVVSCVIVQKNGAGFHIGHSAYWDISNDNICQV 94
BLAST of mRNA_P-wetherbeei_contig12384.1.1 vs. uniprot
Match: A0A7S2XX11_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX11_9STRA) HSP 1 Score: 141 bits (355), Expect = 3.350e-41 Identity = 65/112 (58.04%), Postives = 83/112 (74.11%), Query Frame = 1
Query: 1 SEQLAFIPEQVESLLMRAVEGVLKNEVYDESKVSQWVDSICDRSMLQLQELNKPFKYVVSCAIVQKCGAGFHAAHSAYWDISGDNMCQVSWPTEKMREQQGSRMKCIITAFG 336
SE+LAFIPEQVE LL +A++ VLK EVYD+SKV QW+D+IC+ + +L L KPFKYVV+C I+QK GAG + +A+WD+ DNM WP REQQ SRM C++TAFG
Sbjct: 7 SEELAFIPEQVEPLLYQAIDQVLKTEVYDQSKVPQWIDTICETCVAELTALKKPFKYVVNCLIMQKNGAGLNMGQAAHWDLGNDNMASAKWPP---REQQSSRMVCVVTAFG 115
BLAST of mRNA_P-wetherbeei_contig12384.1.1 vs. uniprot
Match: A0A8J2SFI7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SFI7_9STRA) HSP 1 Score: 133 bits (334), Expect = 5.930e-38 Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = 1
Query: 1 SEQLAFIPEQVESLLMRAVEGVLKNEVYDESKVSQWVDSICDRSMLQLQELNKPFKYVVSCAIVQKCGAGFHAAHSAYWDISGDNMCQVSWPTEKMREQQGSRMKCIITAFGLSL 345
SE AF PE+VE LL V VL NEVYDESKV+ WVD ICD+SM +L ++NKPFKYVV+C ++QK GAG H S +WD++ DN ++++P ++ RM C++T FG+S+
Sbjct: 8 SEDTAFQPEEVEPLLNDVVAKVLANEVYDESKVATWVDRICDQSMQKLTQMNKPFKYVVTCILMQKNGAGVHTGQSCFWDVANDNCARIAYPLASKKQAYDPRMYCVVTCFGVSM 122
BLAST of mRNA_P-wetherbeei_contig12384.1.1 vs. uniprot
Match: A0A7S1XIN6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XIN6_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.430e-36 Identity = 57/115 (49.57%), Postives = 82/115 (71.30%), Query Frame = 1
Query: 1 SEQLAFIPEQVESLLMRAVEGVLKNEVYDESKVSQWVDSICDRSMLQLQELNKPFKYVVSCAIVQKCGAGFHAAHSAYWDISGDNMCQVSWPTEKMREQQGSRMKCIITAFGLSL 345
SE+LAF PEQVES+L + + V+ VYD++KV+QWVD I DR M L EL KPFKY V+ I+Q+ GAG H++HS +WD++ DN+ Q +WP +K R+Q +RM ++T F ++
Sbjct: 7 SEELAFTPEQVESMLYQVITQVIGQSVYDDAKVAQWVDEINDRCMEMLVELTKPFKYTVTTFIMQRKGAGLHSSHSCFWDMATDNIAQANWPNDKHRDQHNNRMYVVVTVFAAAM 121
BLAST of mRNA_P-wetherbeei_contig12384.1.1 vs. uniprot
Match: A0A2R5G4I6_9STRA (Dynein light chain Tctex-type n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G4I6_9STRA) HSP 1 Score: 120 bits (301), Expect = 5.810e-33 Identity = 53/113 (46.90%), Postives = 81/113 (71.68%), Query Frame = 1
Query: 1 SEQLAFIPEQVESLLMRAVEGVLKNEVYDESKVSQWVDSICDRSMLQLQELNKPFKYVVSCAIVQKCGAGFHAAHSAYWDISGDNMCQVSWPTEKMREQQGSRMKCIITAFGL 339
+E+ AFI E+VE ++ ++E LK++ +DE+KV++W+DSIC+ M L +L KPFKYV++CAI+QK GAG H A+S+YWD D V WP +K +EQ + + CI++ +GL
Sbjct: 7 AEESAFIAEEVERIVESSIETHLKDQAHDETKVARWIDSICETCMQDLADLGKPFKYVITCAIMQKNGAGLHTANSSYWDTVSDGCVTVKWPGDKSKEQNKT-LYCIVSVYGL 118
BLAST of mRNA_P-wetherbeei_contig12384.1.1 vs. uniprot
Match: K3WSZ8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSZ8_GLOUD) HSP 1 Score: 120 bits (301), Expect = 5.980e-33 Identity = 56/114 (49.12%), Postives = 80/114 (70.18%), Query Frame = 1
Query: 1 SEQLAFIPEQVESLLMRAVEGVLKNEVYDESKVSQWVDSICDRSMLQLQELNKPFKYVVSCAIVQKCGAGFHAAHSAYWDISGDNMCQVSWPTEKMREQQGSRMKCIITAFGLS 342
SE+LAF+ E+V+ +++ +++ LK+E+YDE KV+ WVD+ICD + QL EL KP KY+VSC I+QK GAG HA+ S +WD D V WP++K ++ S M CI+T GLS
Sbjct: 8 SEELAFVAEEVDRIIVVSIDACLKDEMYDERKVAHWVDAICDAILKQLSELRKPLKYIVSCMIMQKNGAGVHASVSCHWDTVTDGAHVVKWPSDKHKDHNRS-MYCIVTVGGLS 120
BLAST of mRNA_P-wetherbeei_contig12384.1.1 vs. uniprot
Match: D0MVI0_PHYIT (Dynein light chain-like protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MVI0_PHYIT) HSP 1 Score: 119 bits (298), Expect = 1.710e-32 Identity = 59/114 (51.75%), Postives = 77/114 (67.54%), Query Frame = 1
Query: 1 SEQLAFIPEQVESLLMRAVEGVLKNEVYDESKVSQWVDSICDRSMLQLQELNKPFKYVVSCAIVQKCGAGFHAAHSAYWDISGDNMCQVSWPTEKMREQQGSRMKCIITAFGLS 342
SE+LAF+ E+V+ +++ ++E LK+EVYDE KVSQWVD IC+ M L EL KP KY+VSC I+QK GAG HA+ S +WD D V WP +K ++ S M CI T GLS
Sbjct: 8 SEELAFVAEEVDRIILTSIESCLKDEVYDELKVSQWVDYICESIMKGLGELRKPLKYIVSCLIMQKNGAGVHASVSCHWDTVTDGAHVVKWPGDKHKDHNRS-MYCITTVSGLS 120
BLAST of mRNA_P-wetherbeei_contig12384.1.1 vs. uniprot
Match: A0A6A4AER1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4AER1_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.860e-31 Identity = 59/114 (51.75%), Postives = 78/114 (68.42%), Query Frame = 1
Query: 1 SEQLAFIPEQVESLLMRAVEGVLKNEVYDESKVSQWVDSICDRSMLQLQELNKPFKYVVSCAIVQKCGAGFHAAHSAYWDISGDNMCQVSWPTEKMREQQGSRMKCIITAFGLS 342
SE+LAF+ E+V+ +++ ++E LK+EVYDE KVSQWVD IC+ M L EL KP KY+VSC I+QK GAG HA+ S +WD D V WP +K ++ S M C+IT GLS
Sbjct: 214 SEELAFVAEEVDRIILTSIESCLKDEVYDEQKVSQWVDYICESIMKGLSELRKPLKYIVSCLIMQKNGAGVHASVSCHWDTVTDGAHVVKWPGDKHKDHNRS-MYCVITVSGLS 326
BLAST of mRNA_P-wetherbeei_contig12384.1.1 vs. uniprot
Match: T0QB04_SAPDV (Uncharacterized protein n=6 Tax=Saprolegniaceae TaxID=4764 RepID=T0QB04_SAPDV) HSP 1 Score: 116 bits (290), Expect = 2.810e-31 Identity = 56/113 (49.56%), Postives = 79/113 (69.91%), Query Frame = 1
Query: 1 SEQLAFIPEQVESLLMRAVEGVLKNEVYDESKVSQWVDSICDRSMLQLQELNKPFKYVVSCAIVQKCGAGFHAAHSAYWDISGDNMCQVSWPTEKMREQQGSRMKCIITAFGL 339
SE+LAF+ E+V+ +++++VE LK+ Y+E++VS WVDSICD M L EL KP KY+VSC I+QK GAG H+A S +WD + D V WP++K +E + M CI+T GL
Sbjct: 8 SEELAFVAEEVDRIILQSVEHFLKDRSYEETEVSHWVDSICDGIMKGLCELRKPLKYIVSCVIMQKNGAGVHSAVSCHWDTAIDGAHVVKWPSDKHKEHNRT-MYCIVTVGGL 119 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12384.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12384.1.1 >prot_P-wetherbeei_contig12384.1.1 ID=prot_P-wetherbeei_contig12384.1.1|Name=mRNA_P-wetherbeei_contig12384.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=116bp SEQLAFIPEQVESLLMRAVEGVLKNEVYDESKVSQWVDSICDRSMLQLQEback to top mRNA from alignment at P-wetherbeei_contig12384:1239..1586- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12384.1.1 ID=mRNA_P-wetherbeei_contig12384.1.1|Name=mRNA_P-wetherbeei_contig12384.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig12384:1239..1586- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12384:1239..1586- >mRNA_P-wetherbeei_contig12384.1.1 ID=mRNA_P-wetherbeei_contig12384.1.1|Name=mRNA_P-wetherbeei_contig12384.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig12384:1239..1586- (Phaeothamnion wetherbeei SAG_119_79)back to top |