mRNA_P-wetherbeei_contig12234.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12234.1.1 vs. uniprot
Match: A0A1W1I166_9BACT (FeS cluster assembly protein n=1 Tax=Nitrospira japonica TaxID=1325564 RepID=A0A1W1I166_9BACT) HSP 1 Score: 131 bits (329), Expect = 2.240e-37 Identity = 59/106 (55.66%), Postives = 85/106 (80.19%), Query Frame = 1 Query: 1 MVNLTEKAQQEVSRLIKENELSDSVLRMGVRGGGCSGLSYTLGFDKEVGEYDHVFNYDDGIRVAIDMKSMLYLKGTEVDFTQDLLGGGFKFNNPNAKKSCGCGSSF 318 ++ LTE A +EV RLI L++ LR+GV+GGGCSGLSYT+ FD+++G+YD V+++D G++V +D KS +YL+GT++D+ +DL+GG FKF NPNA K+CGCG SF Sbjct: 11 VITLTEAALKEVKRLINVQGLTEGGLRLGVKGGGCSGLSYTINFDEKIGQYDQVYDFD-GVKVIVDAKSAIYLQGTQLDYQKDLMGGSFKFVNPNANKTCGCGESF 115
BLAST of mRNA_P-wetherbeei_contig12234.1.1 vs. uniprot
Match: A0A1W9G482_9BACT ([Fe-S]-binding protein n=2 Tax=unclassified Nitrospira TaxID=2652172 RepID=A0A1W9G482_9BACT) HSP 1 Score: 130 bits (328), Expect = 3.370e-37 Identity = 61/106 (57.55%), Postives = 82/106 (77.36%), Query Frame = 1 Query: 1 MVNLTEKAQQEVSRLIKENELSDSVLRMGVRGGGCSGLSYTLGFDKEVGEYDHVFNYDDGIRVAIDMKSMLYLKGTEVDFTQDLLGGGFKFNNPNAKKSCGCGSSF 318 +V L+E A +EV RLI + LR+GV+GGGCSGLSYT+ FD+++G+YD VF +D G+RV ID KS +YL+GT++D+ +DL+GG FKF NPNA K+CGCG SF Sbjct: 13 VVTLSESALKEVKRLINVQGIESGGLRLGVKGGGCSGLSYTINFDEKIGQYDQVFEFD-GVRVIIDAKSAIYLQGTQLDYQKDLMGGNFKFVNPNANKTCGCGESF 117
BLAST of mRNA_P-wetherbeei_contig12234.1.1 vs. uniprot
Match: A0A2E5X2H1_9BACT (Iron-sulfur cluster assembly accessory protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X2H1_9BACT) HSP 1 Score: 130 bits (327), Expect = 3.440e-37 Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 1 MVNLTEKAQQEVSRLIKENEL-SDSVLRMGVRGGGCSGLSYTLGFDKEVGEYDHVFNYDDGIRVAIDMKSMLYLKGTEVDFTQDLLGGGFKFNNPNAKKSCGCGSSF 318 M+ LTE+A QE+ R+IKE + + + LR+GV+GGGCSG SYTLGFD VGE D VF +D +RV D KS LYL GTE+DF DL+G GFKF NPNA K+CGCG SF Sbjct: 1 MITLTERAGQELERIIKEQGMPTGTALRVGVKGGGCSGFSYTLGFDDAVGELDQVFEVND-VRVVCDPKSFLYLNGTEIDFEDDLMGRGFKFVNPNASKTCGCGESF 106
BLAST of mRNA_P-wetherbeei_contig12234.1.1 vs. uniprot
Match: A0A7T5RKQ7_9BACT (Iron-sulfur cluster assembly accessory protein n=1 Tax=Candidatus Niyogibacteria bacterium TaxID=2750078 RepID=A0A7T5RKQ7_9BACT) HSP 1 Score: 129 bits (323), Expect = 1.440e-36 Identity = 60/108 (55.56%), Postives = 81/108 (75.00%), Query Frame = 1 Query: 1 MVNLTEKAQQEVSRLIKENELSDSVLRMGVRGGGCSGLSYTLGFDKEVGEYDHVFNYDDGIRVAIDMKSMLYLKGTEVDFTQDLLGGGFKFNNPNAKKSCGCGSSFQP 324 M+ LTE A +E+ RL +E L + VLR+GV+GGGCSGLSYTLGFD E+ + D VF + GI+V +D KS+LY+ GT + + Q ++GGGF+F NPNA ++CGCG SF P Sbjct: 1 MIKLTESAIKEIKRLKEEKNLQNHVLRIGVQGGGCSGLSYTLGFDTEIKDKDKVFEIE-GIKVVVDQKSLLYIDGTTLTYEQSMMGGGFRFENPNASRTCGCGESFSP 107
BLAST of mRNA_P-wetherbeei_contig12234.1.1 vs. uniprot
Match: A0A679HIS1_9BACT (FeS cluster assembly protein n=1 Tax=Nitrospira sp. KM1 TaxID=1936990 RepID=A0A679HIS1_9BACT) HSP 1 Score: 128 bits (322), Expect = 2.680e-36 Identity = 58/106 (54.72%), Postives = 85/106 (80.19%), Query Frame = 1 Query: 1 MVNLTEKAQQEVSRLIKENELSDSVLRMGVRGGGCSGLSYTLGFDKEVGEYDHVFNYDDGIRVAIDMKSMLYLKGTEVDFTQDLLGGGFKFNNPNAKKSCGCGSSF 318 ++ LT+ A +EV RLI L++ LR+GV+GGGCSGLSYT+ FD+++G +D VF++D G++V +D+KS +YL+GT++D+ +DL+GG FKF NPNA K+CGCG SF Sbjct: 12 VITLTDAALKEVKRLINVQGLTEGGLRLGVKGGGCSGLSYTINFDEKIGPHDQVFDFD-GVKVIVDVKSAIYLQGTQLDYHKDLMGGNFKFVNPNANKTCGCGESF 116
BLAST of mRNA_P-wetherbeei_contig12234.1.1 vs. uniprot
Match: D8P863_9BACT (Iron-sulfur cluster assembly protein IscA n=17 Tax=Nitrospirae TaxID=40117 RepID=D8P863_9BACT) HSP 1 Score: 128 bits (321), Expect = 3.910e-36 Identity = 57/106 (53.77%), Postives = 83/106 (78.30%), Query Frame = 1 Query: 1 MVNLTEKAQQEVSRLIKENELSDSVLRMGVRGGGCSGLSYTLGFDKEVGEYDHVFNYDDGIRVAIDMKSMLYLKGTEVDFTQDLLGGGFKFNNPNAKKSCGCGSSF 318 ++ L++ A +EV RLI + + LR+GV+GGGCSGLSYT+ FD+++G+YD V+ +D G++V +D KS +YL+GT++DF +DL+GG FKF NPNA K+CGCG SF Sbjct: 13 VITLSDAALKEVKRLINVQGIEEGGLRLGVKGGGCSGLSYTINFDEKIGQYDQVYEFD-GVKVIVDAKSAIYLQGTQLDFQKDLMGGNFKFVNPNANKTCGCGESF 117
BLAST of mRNA_P-wetherbeei_contig12234.1.1 vs. uniprot
Match: A0A533Z944_9BACT (Iron-sulfur cluster assembly accessory protein n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A533Z944_9BACT) HSP 1 Score: 127 bits (319), Expect = 7.210e-36 Identity = 63/106 (59.43%), Postives = 79/106 (74.53%), Query Frame = 1 Query: 1 MVNLTEKAQQEVSRLIKENELSDSVLRMGVRGGGCSGLSYTLGFDKEVGEYDHVFNYDDGIRVAIDMKSMLYLKGTEVDFTQDLLGGGFKFNNPNAKKSCGCGSSF 318 +V LTE A +EV RL K L + LR+GV+GGGCSGLSYT+ FD E G YD V+ D IRV +DMKS +YL+GT++D+ +D+L G FKF+NPNA KSCGCG SF Sbjct: 10 IVTLTENAVKEVKRLQKVQGLEGTALRLGVKGGGCSGLSYTVNFDTEAGPYDQVYEVGD-IRVIVDMKSTIYLQGTQLDYQKDMLSGQFKFSNPNATKSCGCGESF 114
BLAST of mRNA_P-wetherbeei_contig12234.1.1 vs. uniprot
Match: A0A7V8W470_9BACT (Iron-sulfur cluster assembly accessory protein n=1 Tax=Nitrospirales bacterium TaxID=2358460 RepID=A0A7V8W470_9BACT) HSP 1 Score: 127 bits (319), Expect = 7.430e-36 Identity = 59/106 (55.66%), Postives = 84/106 (79.25%), Query Frame = 1 Query: 1 MVNLTEKAQQEVSRLIKENELSDSVLRMGVRGGGCSGLSYTLGFDKEVGEYDHVFNYDDGIRVAIDMKSMLYLKGTEVDFTQDLLGGGFKFNNPNAKKSCGCGSSF 318 +V L+E A +EV RLI +++ LR+GV+GGGCSGLSYT+ FD+++G+YD V+ + GI+V +D KS +YL+GT++DF +DL+GG FKF NPNA+K+CGCG SF Sbjct: 11 VVTLSESAVKEVKRLINVQGMTEGGLRLGVKGGGCSGLSYTINFDEKIGQYDTVYEIE-GIKVIVDTKSAIYLQGTQLDFQKDLMGGAFKFVNPNAQKTCGCGESF 115
BLAST of mRNA_P-wetherbeei_contig12234.1.1 vs. uniprot
Match: T0MHJ3_9BACT (Iron-sulfur cluster assembly protein IscA n=2 Tax=unclassified candidate division Zixibacteria TaxID=2751484 RepID=T0MHJ3_9BACT) HSP 1 Score: 126 bits (317), Expect = 1.110e-35 Identity = 59/106 (55.66%), Postives = 83/106 (78.30%), Query Frame = 1 Query: 1 MVNLTEKAQQEVSRLIKENELSDSVLRMGVRGGGCSGLSYTLGFDKEVGEYDHVFNYDDGIRVAIDMKSMLYLKGTEVDFTQDLLGGGFKFNNPNAKKSCGCGSSF 318 M+ L+E+A +E RLI++ + LR+GV GGCSGL+Y + FD+++ E D V+++D G++VA+D++S+LYL GT +D+T DLLGGGFKF NPNAKKSCGCG SF Sbjct: 1 MITLSERAIKEAKRLIEKQNAQNMYLRVGVEAGGCSGLNYLMSFDEKITEQDKVYDFD-GVKVAVDIRSLLYLMGTTLDYTGDLLGGGFKFVNPNAKKSCGCGHSF 105
BLAST of mRNA_P-wetherbeei_contig12234.1.1 vs. uniprot
Match: A0A518BQN2_9BACT (Iron-sulfur cluster insertion protein ErpA n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BQN2_9BACT) HSP 1 Score: 126 bits (317), Expect = 1.140e-35 Identity = 61/107 (57.01%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 1 MVNLTEKAQQEVSRLIKENELSDS-VLRMGVRGGGCSGLSYTLGFDKEVGEYDHVFNYDDGIRVAIDMKSMLYLKGTEVDFTQDLLGGGFKFNNPNAKKSCGCGSSF 318 M+ +T++A EV R++ E L ++ VLR+GV+GGGCSG SYTLGFD + G D +F +G+RVA+D KS LYL GT++DF + L+G GFKF NPNA KSCGCG SF Sbjct: 1 MITVTDRAVGEVRRIVSEQSLPETTVLRVGVKGGGCSGFSYTLGFDDKTGPADQIFE-SNGVRVAVDPKSFLYLSGTQIDFEESLMGRGFKFGNPNASKSCGCGESF 106 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12234.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12234.1.1 >prot_P-wetherbeei_contig12234.1.1 ID=prot_P-wetherbeei_contig12234.1.1|Name=mRNA_P-wetherbeei_contig12234.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=109bp MVNLTEKAQQEVSRLIKENELSDSVLRMGVRGGGCSGLSYTLGFDKEVGEback to top mRNA from alignment at P-wetherbeei_contig12234:239..565+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12234.1.1 ID=mRNA_P-wetherbeei_contig12234.1.1|Name=mRNA_P-wetherbeei_contig12234.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig12234:239..565+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12234:239..565+ >mRNA_P-wetherbeei_contig12234.1.1 ID=mRNA_P-wetherbeei_contig12234.1.1|Name=mRNA_P-wetherbeei_contig12234.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig12234:239..565+ (Phaeothamnion wetherbeei SAG_119_79)back to top |