mRNA_P-wetherbeei_contig1220.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1220.3.1 vs. uniprot
Match: D7FNF2_ECTSI (Similar to photosystem II oxygen evolving complex protein PsbP in Synechococcus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNF2_ECTSI) HSP 1 Score: 144 bits (362), Expect = 1.370e-39 Identity = 78/157 (49.68%), Postives = 101/157 (64.33%), Query Frame = 1 Query: 1 FSFVPPPGFVRFRKPLKTHLEEATFKSER-RGYQIGVAVDPIKIDALSRFGTPEEVGERVVAVERAKDGTLEVRLVSAAAGDAGXXXXXXXXXXXGGAVPAYTLEYAVDSTRGKNRFVAKVAVRGGRLYVCTGQAKEADLPEVAAEMAAAVGSFRLL 468 F+ P GF F KPLKTH E FKSE +GY++GVA+DP++I++L FGTPEEVG RV+ VE+AKDGTL+ +L+ +A G + YTL+Y V+STRG FVAKV ++ LY CT QAKE D P+V AE+ V SFR+L Sbjct: 131 FALRYPVGFKGFSKPLKTHKVEVNFKSEEVKGYEVGVAIDPVRIESLETFGTPEEVGARVLKVEQAKDGTLDTKLLDTSAEKQGD-------------LSLYTLDYFVESTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQVEAELKRVVESFRVL 274
BLAST of mRNA_P-wetherbeei_contig1220.3.1 vs. uniprot
Match: A0A6H5JQE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQE7_9PHAE) HSP 1 Score: 140 bits (353), Expect = 1.450e-35 Identity = 76/156 (48.72%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 1 FSFVPPPGFVRFRKPLKTHLEEATFKSER-RGYQIGVAVDPIKIDALSRFGTPEEVGERVVAVERAKDGTLEVRLVSAAAGDAGXXXXXXXXXXXGGAVPAYTLEYAVDSTRGKNRFVAKVAVRGGRLYVCTGQAKEADLPEVAAEMAAAVGSFRL 465 F+ P GF F KPLKTH E FKSE +GY++GVA+DP++I++L FGTPEEVG RV+ VE+AKDGTL+ +L+ +A G + YTL+Y V++TRG FVAKV ++ LY CT QAKE D P+V AE+ V SFR+ Sbjct: 1996 FALRYPVGFKGFSKPLKTHKVEVNFKSEEVKGYEVGVAIDPVRIESLETFGTPEEVGARVLKVEQAKDGTLDTKLLDTSAEKQGD-------------LSLYTLDYFVENTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQVEAELKHIVESFRV 2138
BLAST of mRNA_P-wetherbeei_contig1220.3.1 vs. uniprot
Match: A0A836CB55_9STRA (PsbP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB55_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.700e-31 Identity = 68/154 (44.16%), Postives = 95/154 (61.69%), Query Frame = 1 Query: 1 FSFVPPPGFVRFRKPLKTHLEEATFKSER-RGYQIGVAVDPIKIDALSRFGTPEEVGERVVAVERAKDGTLEVRLVSAAAGDAGXXXXXXXXXXXGGAVPAYTLEYAVDSTRGKNRFVAKVAVRGGRLYVCTGQAKEADLPEVAAEMAAAVGSF 459 FSF P F + K LKTH +E +KS RGY+IGVAVDP++I++L +FG+ +EVG +VV VE KDG LE +L+ ++ G V AYT+EY V++T ++FVAKV ++ GRL+VCTG+ K D + + AVGSF Sbjct: 13 FSFRYPGDFKAYSKLLKTHKQEVNYKSPTARGYEIGVAVDPVRINSLDQFGSAQEVGTKVVNVELGKDGCLEAKLLGTSSERMGD-------------VLAYTIEYYVENTHYTSQFVAKVIIKDGRLFVCTGKCKAKDFDTYGSALREAVGSF 153
BLAST of mRNA_P-wetherbeei_contig1220.3.1 vs. uniprot
Match: A0A7S2WW61_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW61_9STRA) HSP 1 Score: 120 bits (300), Expect = 7.920e-31 Identity = 75/158 (47.47%), Postives = 89/158 (56.33%), Query Frame = 1 Query: 1 FSFVPPPGFVRFRKPLKTHLEEATFKSER-RGYQIGVAVDPIKIDALSRFGTPEEVGERVVAVERAKDGTLEVRLVSAA-AGDAGXXXXXXXXXXXGGAVPAYTLEYAVDSTRGKNRFVAKVAVRGGRLYVCTGQAKEADLPEVAAEMAAAVGSFRLL 468 + F P GF KPLKTHL E KSE RGY G+AVDPIKI +L FG P VG RVV VER KDG L LV A A DA + Y L+Y +STRG NRF++++A+R G+L+V T Q K+AD V AE SF LL Sbjct: 83 YEFSYPAGFAVTSKPLKTHLVEVNVKSEAVRGYSAGLAVDPIKIPSLEAFGDPTTVGNRVVGVERRKDGVLSADLVGAERAQDAR-------------GIVYYDLDYVAESTRGNNRFLSRIAIREGKLHVFTVQTKQADFGSVEAEARDMAQSFHLL 227
BLAST of mRNA_P-wetherbeei_contig1220.3.1 vs. uniprot
Match: A0A7S0QHT9_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QHT9_9CRYP) HSP 1 Score: 116 bits (290), Expect = 6.410e-30 Identity = 68/158 (43.04%), Postives = 94/158 (59.49%), Query Frame = 1 Query: 1 FSFVPPPGFVRFRKPLKTHLEEATFKSER-RGYQIGVAVDPIKIDALSRFGTPEEVGERVVAVERAKDGTLEVRLVSAAAGDAGXXXXXXXXXXXGGAVPAYTLEYAVDSTRGKNRFVAKVAVRGGRLYVCTGQAKEADLPEVAAEMAAAVGSFRLLP 471 FS P + +KP+KTHLEE S+ +G ++GV+VDP+KID ++ FGTP +VG+RVVA+ER+KDG L +L++ D VP YT+EYA +STRG RF+AKVA+ RL+V T QAK A + A + SF + P Sbjct: 31 FSVDYPAAWRASQKPVKTHLEEVNLLSDTSKGTELGVSVDPVKIDTVTAFGTPLQVGKRVVALERSKDGVLSAKLIAVGQEDRD-------------GVPYYTIEYASESTRGNRRFLAKVAIVRRRLFVLTAQAKTDSFAADEAALRAGLASFAVDP 175
BLAST of mRNA_P-wetherbeei_contig1220.3.1 vs. uniprot
Match: A0A7S0LET4_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LET4_9EUKA) HSP 1 Score: 117 bits (293), Expect = 6.880e-30 Identity = 72/162 (44.44%), Postives = 94/162 (58.02%), Query Frame = 1 Query: 1 FSFVPPPGFVRFRKPLKTHLEEATFKSERRGYQIGVAVDPIKIDALSRFGTPEEVGERVVAVERAKDGTLEVRLVSAAAGDAGXXXXXXXXXXXGGAVPAYTLEYAVDSTRGKNRFVAKVAVRGGRLYVCTGQAKEADLPEVAAE----MAAAVGSFRLLPP 474 +S P G+ +KP+KTHL EA S R+G +GV VDP+KID+L FGTPEEV +RV+AVE +DG L+V+L S AA DAG YT+EY V+STRGK ++ K + RLYV QAK D A++ + A V SFR+ P Sbjct: 69 YSLSYPSGWNPTQKPVKTHLSEALLNSPRKGVSLGVTVDPVKIDSLEAFGTPEEVADRVLAVEEGRDGVLDVQLRSLAA-DAGKPSY-------------YTIEYFVESTRGKKVYLCKYCIAQKRLYVLQTQAKVVDYDSAASDVQQQLRAIVASFRVSVP 216
BLAST of mRNA_P-wetherbeei_contig1220.3.1 vs. uniprot
Match: A0A7R9WT23_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WT23_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.510e-28 Identity = 68/155 (43.87%), Postives = 87/155 (56.13%), Query Frame = 1 Query: 1 FSFVPPPGFVRFRKPLKTHLEEATFKSER-RGYQIGVAVDPIKIDALSRFGTPEEVGERVVAVERAKDGTLEVRLVS-AAAGDAGXXXXXXXXXXXGGAVPAYTLEYAVDSTRGKNRFVAKVAVRGGRLYVCTGQAKEADLPEVAAEMAAAVGSF 459 ++F PP F +KPL+THLEE F S+ +GYQ G+ VDP++I++L +FGTPEEV RVV E +DG EV LVS A D G +Y LEY D RGK FV K+ V +LYV T QAKE D V E+ + +F Sbjct: 150 YAFRPPTDFSNTKKPLQTHLEEVNFVSDTTKGYQYGITVDPVRIESLKQFGTPEEVAARVVTAEVNRDGVFEVTLVSDPIASDDG----------------SYVLEYLSDGKRGKKHFVTKIFVSKKKLYVLTAQAKEVDFASVKEELFGTLTTF 288
BLAST of mRNA_P-wetherbeei_contig1220.3.1 vs. uniprot
Match: K0RL95_THAOC (PsbP domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RL95_THAOC) HSP 1 Score: 111 bits (278), Expect = 4.580e-27 Identity = 59/138 (42.75%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 1 FSFVPPPGFVRFRKPLKTHLEEATFKSERRGYQIGVAVDPIKIDALSRFGTPEEVGERVVAVERAKDGTLEVRLVSAAAGDAGXXXXXXXXXXXGGAVPAYTLEYAVDSTRGKNRFVAKVAVRGGRLYVCTGQAKEAD 414 ++ PP F KPLKTHL+E F + RGYQ+GV VDP++I ++ FG PE+V RVV E +DG +V+LV AA DA + Y +EY D RG RFV ++ V+ G LYV T Q+KEA+ Sbjct: 134 YTVTPPASFTSSNKPLKTHLDEINFSGDVRGYQVGVTVDPVRIKSIKEFGDPEQVAARVVTAEVNRDGVFDVKLVKDAAEDA--------------QLGCYDVEYISDGKRGTKRFVTRIYVKEGFLYVLTFQSKEAE 257
BLAST of mRNA_P-wetherbeei_contig1220.3.1 vs. uniprot
Match: A0A7S1Z306_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z306_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.060e-26 Identity = 64/157 (40.76%), Postives = 83/157 (52.87%), Query Frame = 1 Query: 1 FSFVPPPGFVRFRKPLKTHLEEATFKSER--RGYQIGVAVDPIKIDALSRFGTPEEVGERVVAVERAKDGTLEVRLVSAAAGDAGXXXXXXXXXXXGGAVPAYTLEYAVDSTRGKNRFVAKVAVRGGRLYVCTGQAKEADLPEVAAEMAAAVGSFRL 465 + F+PP GF KPLKTHL+E F E RGYQ GV VDP++ID+L +FGTPEEV RVV E +DG +V LV + Y ++Y D RGK FV ++ ++ LYV T QAK + E+ EM V +F L Sbjct: 122 YEFLPPAGFKEGNKPLKTHLDEVNFAKEGAPRGYQYGVTVDPVRIDSLRQFGTPEEVAARVVTAEVNRDGIFQVTLVKDPVENPNNG--------------CYEIDYLSDGKRGKKNFVTRIFIQKNMLYVLTAQAKVENYEELEQEMLDCVKTFSL 264
BLAST of mRNA_P-wetherbeei_contig1220.3.1 vs. uniprot
Match: A0A0G4EN49_VITBC (PsbP domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EN49_VITBC) HSP 1 Score: 101 bits (251), Expect = 1.550e-24 Identity = 58/139 (41.73%), Postives = 87/139 (62.59%), Query Frame = 1 Query: 61 EEATFKS-ERRGYQIGVAVDPIKIDALSRFGTPEEVGERVVAVERAKDGTLEVRLVSAAAGDAGXXXXXXXXXXXGGAVPAYTLEYAVDSTRGKNRFVAKVAVRGGRLYVCTGQAKEADLPEVAAEMAAAVGSFRLLPP 474 EE +KS E +GY +GVAVDP+KID+L+ FGTP+ VG+R+V VE+ KDG ++V+L+ A + ++G Y +EY D+TRG N F+ +V V RL+ T Q+K+ D +V +M A V +F ++PP Sbjct: 5 EEINYKSPEIKGYTVGVAVDPVKIDSLAAFGTPDFVGQRIVDVEKKKDGVIDVQLLKAESLESGGQVF-------------YEVEYTSDTTRGFNHFITRVIVVNQRLFAFTAQSKQKDFDKVRDQMKAIVSTF-VVPP 129 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1220.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1220.3.1 >prot_P-wetherbeei_contig1220.3.1 ID=prot_P-wetherbeei_contig1220.3.1|Name=mRNA_P-wetherbeei_contig1220.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=160bp FSFVPPPGFVRFRKPLKTHLEEATFKSERRGYQIGVAVDPIKIDALSRFGback to top mRNA from alignment at P-wetherbeei_contig1220:5597..6346+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1220.3.1 ID=mRNA_P-wetherbeei_contig1220.3.1|Name=mRNA_P-wetherbeei_contig1220.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=750bp|location=Sequence derived from alignment at P-wetherbeei_contig1220:5597..6346+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1220:5597..6346+ >mRNA_P-wetherbeei_contig1220.3.1 ID=mRNA_P-wetherbeei_contig1220.3.1|Name=mRNA_P-wetherbeei_contig1220.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=480bp|location=Sequence derived from alignment at P-wetherbeei_contig1220:5597..6346+ (Phaeothamnion wetherbeei SAG_119_79)back to top |