mRNA_P-wetherbeei_contig11959.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11959.1.1
Unique NamemRNA_P-wetherbeei_contig11959.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11959.1.1 vs. uniprot
Match: A0A6H5KL17_9PHAE (Creatinase_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL17_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.720e-24
Identity = 47/69 (68.12%), Postives = 57/69 (82.61%), Query Frame = 1
Query:    1 DRLQALRQAMQAAKVDAYIVGSEDPHHSEYVSDHDLRRSWLTSFTGSAGTAVVTASEALVWTDGRYFLQ 207
            ++L  LR AMQA  V AY+V ++D HHSEYV+DHD RR WLT FTGSAGTA+VT ++AL+WTDGRYFLQ
Sbjct:   34 EKLSLLRAAMQARGVSAYLVETQDAHHSEYVADHDKRREWLTGFTGSAGTALVTHTKALMWTDGRYFLQ 102          
BLAST of mRNA_P-wetherbeei_contig11959.1.1 vs. uniprot
Match: D8LFB1_ECTSI (Creatinase_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFB1_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 2.430e-24
Identity = 46/69 (66.67%), Postives = 56/69 (81.16%), Query Frame = 1
Query:    1 DRLQALRQAMQAAKVDAYIVGSEDPHHSEYVSDHDLRRSWLTSFTGSAGTAVVTASEALVWTDGRYFLQ 207
            ++L  LR AMQA  V AY+V ++D H SEYV+DHD RR WLT FTGSAGTA+VT ++AL+WTDGRYFLQ
Sbjct:   34 EKLSLLRAAMQARGVSAYLVETQDAHQSEYVADHDKRREWLTGFTGSAGTALVTHTKALMWTDGRYFLQ 102          
BLAST of mRNA_P-wetherbeei_contig11959.1.1 vs. uniprot
Match: UPI0014255CAD (xaa-Pro aminopeptidase 1-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014255CAD)

HSP 1 Score: 89.4 bits (220), Expect = 6.860e-22
Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 1
Query:   40 KVDAYIVGSEDPHHSEYVSDHDLRRSWLTSFTGSAGTAVVTASEALVWTDGRYFLQ 207
            KVDAYI+ SED H SEY++D D RR +++ FTGSAG A+VTA+EAL+WTDGRYFLQ
Sbjct:    8 KVDAYIIPSEDAHQSEYIADRDKRRQYISGFTGSAGLAIVTANEALLWTDGRYFLQ 63          
BLAST of mRNA_P-wetherbeei_contig11959.1.1 vs. uniprot
Match: A0A3M1Z2Y2_9BACT (Aminopeptidase P family protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1Z2Y2_9BACT)

HSP 1 Score: 91.7 bits (226), Expect = 1.130e-21
Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 1
Query:    1 DRLQALRQAMQAAKVDAYIVGSEDPHHSEYVSDHDLRRSWLTSFTGSAGTAVVTASEALVWTDGRYFLQ 207
            ++L ALR AM+A  +DAYI+ S DPH SEYV+DH   R+W++ FTGSAGT +VT  EA VW D RYF+Q
Sbjct:    5 EKLSALRAAMRAHHIDAYIIPSADPHQSEYVADHWKSRAWISGFTGSAGTVIVTQKEAHVWVDSRYFIQ 73          
BLAST of mRNA_P-wetherbeei_contig11959.1.1 vs. uniprot
Match: A0A139AR36_GONPJ (Creatinase/aminopeptidase n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AR36_GONPJ)

HSP 1 Score: 96.3 bits (238), Expect = 1.220e-21
Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 1
Query:    4 RLQALRQAMQAAKVDAYIVGSEDPHHSEYVSDHDLRRSWLTSFTGSAGTAVVTASEALVWTDGRYFLQ 207
            RL+ LR  M+   V AYI+ +EDPH SEY++D D RR+W++ FTGSAGTAVVTAS AL+WTDGRYFLQ
Sbjct:   27 RLKHLRDVMKDNAVTAYIIPTEDPHQSEYIADCDKRRAWISGFTGSAGTAVVTASMALLWTDGRYFLQ 94          
BLAST of mRNA_P-wetherbeei_contig11959.1.1 vs. uniprot
Match: A0A098S8E6_9BACT (Uncharacterized protein n=1 Tax=Phaeodactylibacter xiamenensis TaxID=1524460 RepID=A0A098S8E6_9BACT)

HSP 1 Score: 95.9 bits (237), Expect = 1.650e-21
Identity = 47/67 (70.15%), Postives = 52/67 (77.61%), Query Frame = 1
Query:    7 LQALRQAMQAAKVDAYIVGSEDPHHSEYVSDHDLRRSWLTSFTGSAGTAVVTASEALVWTDGRYFLQ 207
            L  LRQAMQ   +DAYIV S+DPH SEYV+DH   R WLT FTGSAGTAVVTAS A +WTD RYF+Q
Sbjct:   14 LDRLRQAMQENGLDAYIVPSQDPHQSEYVADHWQARRWLTGFTGSAGTAVVTASTAHLWTDSRYFIQ 80          
BLAST of mRNA_P-wetherbeei_contig11959.1.1 vs. uniprot
Match: UPI000711D15A (metallopeptidase M24 family protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711D15A)

HSP 1 Score: 94.7 bits (234), Expect = 4.220e-21
Identity = 45/69 (65.22%), Postives = 53/69 (76.81%), Query Frame = 1
Query:    1 DRLQALRQAMQAAKVDAYIVGSEDPHHSEYVSDHDLRRSWLTSFTGSAGTAVVTASEALVWTDGRYFLQ 207
            D+L  LR  M+A K+DAY++ SED H SEYV D   RR W++ FTGSAGTAVVT SEAL+WTD RYFLQ
Sbjct:    5 DKLAQLRSVMEAKKLDAYVIPSEDQHMSEYVPDCYQRRRWISEFTGSAGTAVVTKSEALLWTDSRYFLQ 73          
BLAST of mRNA_P-wetherbeei_contig11959.1.1 vs. uniprot
Match: A0A7S0D2C1_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D2C1_MICPS)

HSP 1 Score: 94.7 bits (234), Expect = 4.270e-21
Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 1
Query:    4 RLQALRQAMQAAKVDAYIVGSEDPHHSEYVSDHDLRRSWLTSFTGSAGTAVVTASEALVWTDGRYFLQ 207
            +L ALR  M AA VDA++V S+DPH SEYV     RR+W++ FTGSAGTAVVTA EAL+WTDGRYFLQ
Sbjct:    8 KLAALRARMAAASVDAFVVPSQDPHFSEYVPTCFERRAWISGFTGSAGTAVVTAREALLWTDGRYFLQ 75          
BLAST of mRNA_P-wetherbeei_contig11959.1.1 vs. uniprot
Match: A0A7X6T259_9CLOT (Aminopeptidase P family protein (Fragment) n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7X6T259_9CLOT)

HSP 1 Score: 88.6 bits (218), Expect = 5.230e-21
Identity = 39/69 (56.52%), Postives = 53/69 (76.81%), Query Frame = 1
Query:    1 DRLQALRQAMQAAKVDAYIVGSEDPHHSEYVSDHDLRRSWLTSFTGSAGTAVVTASEALVWTDGRYFLQ 207
            ++L+ALR  M+   +DA  +G+ DPH SEYV+ +   R+WLT FTGSAGTAVVTA +AL+W DGRY++Q
Sbjct:    6 EKLEALRAQMKTQAIDACYIGTADPHDSEYVAPYYQARAWLTGFTGSAGTAVVTADQALLWADGRYYIQ 74          
BLAST of mRNA_P-wetherbeei_contig11959.1.1 vs. uniprot
Match: UPI0018F28BF7 (aminopeptidase P family N-terminal domain-containing protein n=1 Tax=Petrotoga sp. 9PW.55.5.1 TaxID=1308979 RepID=UPI0018F28BF7)

HSP 1 Score: 87.8 bits (216), Expect = 5.530e-21
Identity = 36/69 (52.17%), Postives = 51/69 (73.91%), Query Frame = 1
Query:    1 DRLQALRQAMQAAKVDAYIVGSEDPHHSEYVSDHDLRRSWLTSFTGSAGTAVVTASEALVWTDGRYFLQ 207
            +R+  LR+ MQ   + AY+V + DPH SEY++D+   R W++ FTGSAGT V+T  EA++WTDGRYF+Q
Sbjct:    5 ERINRLRELMQKMGITAYVVSTSDPHQSEYIADYYKTRVWISGFTGSAGTVVITQKEAILWTDGRYFIQ 73          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11959.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KL17_9PHAE1.720e-2468.12Creatinase_N domain-containing protein n=1 Tax=Ect... [more]
D8LFB1_ECTSI2.430e-2466.67Creatinase_N domain-containing protein n=1 Tax=Ect... [more]
UPI0014255CAD6.860e-2269.64xaa-Pro aminopeptidase 1-like n=1 Tax=Anneissia ja... [more]
A0A3M1Z2Y2_9BACT1.130e-2159.42Aminopeptidase P family protein (Fragment) n=1 Tax... [more]
A0A139AR36_GONPJ1.220e-2166.18Creatinase/aminopeptidase n=1 Tax=Gonapodya prolif... [more]
A0A098S8E6_9BACT1.650e-2170.15Uncharacterized protein n=1 Tax=Phaeodactylibacter... [more]
UPI000711D15A4.220e-2165.22metallopeptidase M24 family protein n=1 Tax=Blasto... [more]
A0A7S0D2C1_MICPS4.270e-2167.65Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A7X6T259_9CLOT5.230e-2156.52Aminopeptidase P family protein (Fragment) n=1 Tax... [more]
UPI0018F28BF75.530e-2152.17aminopeptidase P family N-terminal domain-containi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11959contigP-wetherbeei_contig11959:182..388 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LFB1
Model size207
Max annot lvl2880.D8LFB1|-
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.73e-23
EggNOG OGsCOG0006@1|root,KOG2413@2759|Eukaryota
DescriptionBelongs to the peptidase M24B family
Cds size180
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185932.8333328-CDS-P-wetherbeei_contig11959:181..3611683185932.8333328-CDS-P-wetherbeei_contig11959:181..361Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11959 182..361 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185932.8427556-UTR-P-wetherbeei_contig11959:361..3881683185932.8427556-UTR-P-wetherbeei_contig11959:361..388Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11959 362..388 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11959.1.1prot_P-wetherbeei_contig11959.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11959 182..361 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11959.1.1

>prot_P-wetherbeei_contig11959.1.1 ID=prot_P-wetherbeei_contig11959.1.1|Name=mRNA_P-wetherbeei_contig11959.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=60bp
MQAAKVDAYIVGSEDPHHSEYVSDHDLRRSWLTSFTGSAGTAVVTASEAL
VWTDGRYFLQ
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mRNA from alignment at P-wetherbeei_contig11959:182..388-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11959.1.1 ID=mRNA_P-wetherbeei_contig11959.1.1|Name=mRNA_P-wetherbeei_contig11959.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=207bp|location=Sequence derived from alignment at P-wetherbeei_contig11959:182..388- (Phaeothamnion wetherbeei SAG_119_79)
GACCGATTACAAGCGCTACGACAGGCAATGCAAGCGGCCAAAGTGGACGC GTACATAGTGGGATCTGAGGATCCCCACCACTCGGAGTACGTGTCGGACC ATGACCTGCGCCGCTCTTGGCTCACGAGTTTTACGGGGTCGGCGGGCACT GCCGTCGTCACCGCGTCGGAAGCTCTCGTCTGGACCGACGGCCGGTACTT CCTTCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11959:182..388-

>mRNA_P-wetherbeei_contig11959.1.1 ID=mRNA_P-wetherbeei_contig11959.1.1|Name=mRNA_P-wetherbeei_contig11959.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=180bp|location=Sequence derived from alignment at P-wetherbeei_contig11959:182..388- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAAGCGGCCAAAGTGGACGCGTACATAGTGGGATCTGAGGATCCCCA
CCACTCGGAGTACGTGTCGGACCATGACCTGCGCCGCTCTTGGCTCACGA
GTTTTACGGGGTCGGCGGGCACTGCCGTCGTCACCGCGTCGGAAGCTCTC
GTCTGGACCGACGGCCGGTACTTCCTTCAG
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