mRNA_P-wetherbeei_contig11935.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11935.1.1 vs. uniprot
Match: A0A835YT86_9STRA (Intraflagellar transport complex B protein 46 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT86_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.470e-25 Identity = 50/89 (56.18%), Postives = 62/89 (69.66%), Query Frame = 1 Query: 1 QVHYKRSMPDIDTLMEVWPVELEDLLSGPGGAAAAFPPPSIELSLDEYCRLACVLLDVPVHDGAGGGGLIESLHLLFTLYMEFKANQHF 267 QVHYKRSMPD+D LMEVWP E E LLS A P P +E+SL+EY + C ++D+PV++ +IESLHLLFT+Y EFK N HF Sbjct: 156 QVHYKRSMPDVDKLMEVWPEEFEQLLS-----TAQLPGPELEMSLEEYAKTICAIMDIPVYEN-----IIESLHLLFTVYQEFKNNAHF 234
BLAST of mRNA_P-wetherbeei_contig11935.1.1 vs. uniprot
Match: G0R2Y9_ICHMG (Uncharacterized protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0R2Y9_ICHMG) HSP 1 Score: 103 bits (258), Expect = 5.990e-25 Identity = 49/89 (55.06%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 4 VHYKRSMPDIDTLMEVWPVELEDLLSGPGGAAAAFPPPSIELSLDEYCRLACVLLDVPVHDGAGGGGLIESLHLLFTLYMEFKANQHFQ 270 V Y + MPDIDTLM+VWP E+ED LS P ++L+L +Y +LAC +LD+PVH+ + +IESLH+LFTLY EFKANQHFQ Sbjct: 212 VSYTKQMPDIDTLMQVWPQEIEDALSN-----FKIPSEELDLNLMDYSKLACAILDIPVHNTSNNTNVIESLHVLFTLYSEFKANQHFQ 295
BLAST of mRNA_P-wetherbeei_contig11935.1.1 vs. uniprot
Match: U3LNS5_9TRYP (Uncharacterized protein (Fragment) n=1 Tax=Paratrypanosoma confusum TaxID=1470209 RepID=U3LNS5_9TRYP) HSP 1 Score: 100 bits (250), Expect = 4.140e-23 Identity = 45/89 (50.56%), Postives = 66/89 (74.16%), Query Frame = 1 Query: 4 VHYKRSMPDIDTLMEVWPVELEDLLSGPGGAAAAFPPPSIELSLDEYCRLACVLLDVPVHDGAGGGGLIESLHLLFTLYMEFKANQHFQ 270 V+Y MPDI+TL++VWP E+E++L+ + AFPPP I+L +++Y +L C +LD+P H+ LI+SLH++FTLY EF+ANQHFQ Sbjct: 371 VNYHTPMPDIETLLQVWPPEVEEILN----SDIAFPPPQIDLDIEQYIKLLCAMLDIPTHNS-----LIDSLHVMFTLYQEFRANQHFQ 450
BLAST of mRNA_P-wetherbeei_contig11935.1.1 vs. uniprot
Match: A0A0P1ABA4_PLAHL (Intraflagellar transport protein 46 homolog isoform x1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ABA4_PLAHL) HSP 1 Score: 100 bits (248), Expect = 9.380e-23 Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 1 QVHYKRSMPDIDTLMEVWPVELEDLLSGPGGAAAAFPPPSIELSLDEYCRLACVLLDVPVHDGAGGGGLIESLHLLFTLYMEFKANQHF 267 QVHY ++MPDI++LM+VWP E EDLLS A P ++LS+++Y R+ C LLD+P+H + ESLH+LFTLY+EF +NQHF Sbjct: 402 QVHYTKTMPDIESLMQVWPAEFEDLLS-----KTALPSADLDLSVEQYARVICALLDIPIHKN-----VYESLHVLFTLYLEFSSNQHF 480
BLAST of mRNA_P-wetherbeei_contig11935.1.1 vs. uniprot
Match: A0A7S3I982_9CILI (Hypothetical protein n=1 Tax=Fabrea salina TaxID=342563 RepID=A0A7S3I982_9CILI) HSP 1 Score: 97.8 bits (242), Expect = 1.900e-22 Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 1 Query: 4 VHYKRSMPDIDTLMEVWPVELEDLLSGPGGAAAAFPPPSIELSLDEYCRLACVLLDVPVHDGAGGGGLIESLHLLFTLYMEFKANQHFQ 270 V+Y + MPDIDTLM+VW ++E+LL+ P P IE+ L Y RL C +LD+PVH+ +IESLHLLFTLY +FK+NQHF+ Sbjct: 246 VNYSKPMPDIDTLMDVWHPQVEELLNN-----IELPSPDIEIDLAGYVRLVCAILDIPVHNLPNNKSMIESLHLLFTLYSDFKSNQHFR 329
BLAST of mRNA_P-wetherbeei_contig11935.1.1 vs. uniprot
Match: A0A7S2V5L8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5L8_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.400e-22 Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 1 Query: 1 QVHYKRSMPDIDTLMEVWPVELEDLLSGPGGAAAAFPPPSIELSLDEYCRLACVLLDVPVHDGAGGGGLIESLHLLFTLYMEFKANQHF 267 QV+YK++MPDI+ LMEVWP ELE++L+ P ++LSL+EY R+ C +LD+PV++ + ++ESLH+LFTLYMEFK NQHF Sbjct: 184 QVNYKQNMPDIEKLMEVWPDELEEMLN-----TIKLPGVDLDLSLEEYIRVICSILDIPVYNES----VVESLHVLFTLYMEFKNNQHF 263
BLAST of mRNA_P-wetherbeei_contig11935.1.1 vs. uniprot
Match: Q23KH7_TETTS (Intraflagellar transport complex B protein 46 carboxy-terminal protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q23KH7_TETTS) HSP 1 Score: 97.1 bits (240), Expect = 3.950e-22 Identity = 43/89 (48.31%), Postives = 60/89 (67.42%), Query Frame = 1 Query: 4 VHYKRSMPDIDTLMEVWPVELEDLLSGPGGAAAAFPPPSIELSLDEYCRLACVLLDVPVHDGAGGGGLIESLHLLFTLYMEFKANQHFQ 270 V Y + MP+ID LM+ WP E+E++L P ++ +L ++C+LAC +LD+PVHD +IESLH+LFTLY EFK+NQHFQ Sbjct: 243 VSYTKPMPEIDELMQEWPQEIEEILQH-----LKIPSEELDFNLSDFCKLACAILDIPVHDQPNESNVIESLHVLFTLYSEFKSNQHFQ 326
BLAST of mRNA_P-wetherbeei_contig11935.1.1 vs. uniprot
Match: A0A3F2RRA7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RRA7_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 4.040e-22 Identity = 45/89 (50.56%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 1 QVHYKRSMPDIDTLMEVWPVELEDLLSGPGGAAAAFPPPSIELSLDEYCRLACVLLDVPVHDGAGGGGLIESLHLLFTLYMEFKANQHF 267 QVHY ++MPDI++LM+VWP E EDLLS P ++++L++Y R+ C LLD+PVH + ESLH+LFTLY+EF++NQHF Sbjct: 326 QVHYTKTMPDIESLMQVWPEEFEDLLS-----KTTLPSADLDMALEQYVRVICALLDIPVHKN-----VYESLHVLFTLYLEFRSNQHF 404
BLAST of mRNA_P-wetherbeei_contig11935.1.1 vs. uniprot
Match: A0A0N1HW27_LEPSE (Uncharacterized protein n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1HW27_LEPSE) HSP 1 Score: 97.8 bits (242), Expect = 5.260e-22 Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 1 Query: 4 VHYKRSMPDIDTLMEVWPVELEDLLSGPGGAAAAFPPPSIELSLDEYCRLACVLLDVPVHDGAGGGGLIESLHLLFTLYMEFKANQHFQ 270 V+Y+R MPDI+TLM+VWP + E++L+ + AFPP I+L LD+Y R C +LD+P + LI+SLH++FTLY EF+ANQHFQ Sbjct: 364 VNYQRPMPDIETLMQVWPQQFEEVLN----SDVAFPPSHIDLDLDQYVRTLCTVLDIPTYSS-----LIDSLHVMFTLYEEFRANQHFQ 443
BLAST of mRNA_P-wetherbeei_contig11935.1.1 vs. uniprot
Match: A0A1V9Z9E3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z9E3_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 5.400e-22 Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 1 Query: 1 QVHYKRSMPDIDTLMEVWPVELEDLLSGPGGAAAAFPPPSIELSLDEYCRLACVLLDVPVHDGAGGGGLIESLHLLFTLYMEFKANQHF 267 QVHY +SMPDI+TLM+VWP E EDLLS P + +SL++Y R+ C +LD+PV+ + ESLH+LFTL++EF++NQHF Sbjct: 168 QVHYSKSMPDIETLMQVWPEEFEDLLS-----KIQLPNADLNVSLEQYTRIICAILDIPVYKN-----VYESLHVLFTLFLEFRSNQHF 246 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11935.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11935.1.1 >prot_P-wetherbeei_contig11935.1.1 ID=prot_P-wetherbeei_contig11935.1.1|Name=mRNA_P-wetherbeei_contig11935.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=83bp MPDIDTLMEVWPVELEDLLSGPGGAAAAFPPPSIELSLDEYCRLACVLLDback to top mRNA from alignment at P-wetherbeei_contig11935:397..666+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11935.1.1 ID=mRNA_P-wetherbeei_contig11935.1.1|Name=mRNA_P-wetherbeei_contig11935.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=270bp|location=Sequence derived from alignment at P-wetherbeei_contig11935:397..666+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11935:397..666+ >mRNA_P-wetherbeei_contig11935.1.1 ID=mRNA_P-wetherbeei_contig11935.1.1|Name=mRNA_P-wetherbeei_contig11935.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=249bp|location=Sequence derived from alignment at P-wetherbeei_contig11935:397..666+ (Phaeothamnion wetherbeei SAG_119_79)back to top |