mRNA_P-wetherbeei_contig11921.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11921.1.1 vs. uniprot
Match: A0A1E3Z7B1_9BORD (HTH marR-type domain-containing protein n=7 Tax=Burkholderiales TaxID=80840 RepID=A0A1E3Z7B1_9BORD) HSP 1 Score: 139 bits (349), Expect = 1.260e-39 Identity = 72/121 (59.50%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 1 SMQRHFEKRMQPLDLTAMQWGPLLLMAEGRASTAAELARGMDIDTGAMTRMLDRLEAKGLVARARSASDRRVVQLELTAEGAKVASQIPQQLADVLNLHLKDFKADELHMLMGFLKRMIAN 363 S+QR + M LDLTAMQWGPL+L+A GR TAAELAR DTGAMTRMLDRLE+KGL+ R RSA DRRV++LELT EG + Q+PQ+L D ++LH +DF E+ L L+RM AN Sbjct: 37 SLQRAVDAEMTALDLTAMQWGPLMLLAMGRGETAAELARSACSDTGAMTRMLDRLESKGLIRRVRSAEDRRVIKLELTEEGVRATEQVPQRLHDAVDLHTRDFSEQEVQQLKSLLRRMAAN 157
BLAST of mRNA_P-wetherbeei_contig11921.1.1 vs. uniprot
Match: A0A208Y7V0_9BURK (MarR family transcriptional regulator n=1 Tax=Pigmentiphaga sp. NML080357 TaxID=2008675 RepID=A0A208Y7V0_9BURK) HSP 1 Score: 138 bits (347), Expect = 2.460e-39 Identity = 73/121 (60.33%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 1 SMQRHFEKRMQPLDLTAMQWGPLLLMAEGRASTAAELARGMDIDTGAMTRMLDRLEAKGLVARARSASDRRVVQLELTAEGAKVASQIPQQLADVLNLHLKDFKADELHMLMGFLKRMIAN 363 S+QR + M LDLTAMQWGPL+L+A GR TAAELAR DTGAMTRMLDRLE+KGL+ R RSA DRRV++LELT EG + QIPQ+L ++LH + F +EL L L+RMIAN Sbjct: 36 SLQRAVDAEMMALDLTAMQWGPLMLLAMGRGETAAELARSTCTDTGAMTRMLDRLESKGLIRRVRSAEDRRVIKLELTEEGVRATEQIPQRLHHAVDLHTRGFSDEELRQLKSLLRRMIAN 156
BLAST of mRNA_P-wetherbeei_contig11921.1.1 vs. uniprot
Match: A0A2V1JZY7_9BURK (MarR family transcriptional regulator n=2 Tax=Alcaligenaceae TaxID=506 RepID=A0A2V1JZY7_9BURK) HSP 1 Score: 134 bits (337), Expect = 8.100e-38 Identity = 72/121 (59.50%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 1 SMQRHFEKRMQPLDLTAMQWGPLLLMAEGRASTAAELARGMDIDTGAMTRMLDRLEAKGLVARARSASDRRVVQLELTAEGAKVASQIPQQLADVLNLHLKDFKADELHMLMGFLKRMIAN 363 SM R E+ M PLDLTAMQW PL+++ G+A TAAELAR +D+DTGAMTR LDRLE KGL+ R RS DRRVV+LELT G +VA+Q P L +L+ HL+DFKA+E+ L +L+RM+ N Sbjct: 35 SMSRIIERDMVPLDLTAMQWRPLMMVYSGKADTAAELARVLDVDTGAMTRTLDRLEGKGLLRRERSQDDRRVVRLELTDAGREVAAQCPAVLGRMLDHHLRDFKAEEVTALRAYLQRMLVN 155
BLAST of mRNA_P-wetherbeei_contig11921.1.1 vs. uniprot
Match: A0A3P4AZF7_9BURK (Multiple antibiotic resistance protein MarR n=1 Tax=Pigmentiphaga humi TaxID=2478468 RepID=A0A3P4AZF7_9BURK) HSP 1 Score: 132 bits (333), Expect = 3.370e-37 Identity = 70/121 (57.85%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 1 SMQRHFEKRMQPLDLTAMQWGPLLLMAEGRASTAAELARGMDIDTGAMTRMLDRLEAKGLVARARSASDRRVVQLELTAEGAKVASQIPQQLADVLNLHLKDFKADELHMLMGFLKRMIAN 363 S+QR + M LDLTAMQWGPL+ +A GR TAAELAR DTGA TRMLDRLE+KGL+ R RSA DRRV++LELT EG + + Q+P++L V+N H + F A+E+ L L+RMIAN Sbjct: 37 SLQRTVDAEMTVLDLTAMQWGPLMQLALGRCETAAELARCACSDTGATTRMLDRLESKGLIRRVRSAQDRRVIKLELTEEGTRASEQVPERLIHVMNQHTRGFTAEEIEQLKSLLRRMIAN 157
BLAST of mRNA_P-wetherbeei_contig11921.1.1 vs. uniprot
Match: A0A0D6H1P0_ALCXX (MarR family transcriptional regulator n=28 Tax=Alcaligenaceae TaxID=506 RepID=A0A0D6H1P0_ALCXX) HSP 1 Score: 132 bits (333), Expect = 3.790e-37 Identity = 73/121 (60.33%), Postives = 89/121 (73.55%), Query Frame = 1 Query: 1 SMQRHFEKRMQPLDLTAMQWGPLLLMAEGRASTAAELARGMDIDTGAMTRMLDRLEAKGLVARARSASDRRVVQLELTAEGAKVASQIPQQLADVLNLHLKDFKADELHMLMGFLKRMIAN 363 S+ R ++ M PLDLTAMQW P+ +++ GRA T AELAR +DTGAMTR LDRLEAKGL+ RARS DRRVV++ELT G A +IP +A VLN HL+ F ADE+ LM FL+RMIAN Sbjct: 38 SLNRMLDQEMAPLDLTAMQWRPIAMVSLGRADTPAELARLNGVDTGAMTRTLDRLEAKGLLRRARSQQDRRVVKIELTELGEAKAREIPPNIAHVLNHHLRGFSADEVTQLMHFLRRMIAN 158
BLAST of mRNA_P-wetherbeei_contig11921.1.1 vs. uniprot
Match: A0A261TFD8_9BORD (MarR family transcriptional regulator n=3 Tax=Bordetella TaxID=517 RepID=A0A261TFD8_9BORD) HSP 1 Score: 132 bits (332), Expect = 6.040e-37 Identity = 72/121 (59.50%), Postives = 87/121 (71.90%), Query Frame = 1 Query: 1 SMQRHFEKRMQPLDLTAMQWGPLLLMAEGRASTAAELARGMDIDTGAMTRMLDRLEAKGLVARARSASDRRVVQLELTAEGAKVASQIPQQLADVLNLHLKDFKADELHMLMGFLKRMIAN 363 SM R ++ M PLDLTAMQW PL ++ GRA T AELAR + +DTGAMTR LDRLEAKGL+ R RS DRRV++LELT +G + A +IPQ +A VLNLHL+ F ADE L RM+AN Sbjct: 40 SMNRMLDQEMAPLDLTAMQWRPLAMIFRGRADTPAELARLIGVDTGAMTRTLDRLEAKGLLRRVRSQEDRRVIKLELTDDGQEKAREIPQYIAKVLNLHLRGFSADETAQARHLLMRMLAN 160
BLAST of mRNA_P-wetherbeei_contig11921.1.1 vs. uniprot
Match: A0A6S7F1X8_9BURK (Transcriptional regulator SlyA n=1 Tax=Achromobacter anxifer TaxID=1287737 RepID=A0A6S7F1X8_9BURK) HSP 1 Score: 131 bits (330), Expect = 1.150e-36 Identity = 72/121 (59.50%), Postives = 87/121 (71.90%), Query Frame = 1 Query: 1 SMQRHFEKRMQPLDLTAMQWGPLLLMAEGRASTAAELARGMDIDTGAMTRMLDRLEAKGLVARARSASDRRVVQLELTAEGAKVASQIPQQLADVLNLHLKDFKADELHMLMGFLKRMIAN 363 SM R ++ M PLDLTAMQW P++L+ +GRA T AELAR +DTGAMTR LDRLEAKGL+ R R DRRVV++ELT G A +IP +A VLN HL+ F DE+ LM FL+RMIAN Sbjct: 38 SMNRMLDQEMAPLDLTAMQWRPIILLFKGRADTPAELARLTGMDTGAMTRALDRLEAKGLLRRTRCQEDRRVVKIELTELGEAKAREIPPNIARVLNYHLRGFSTDEVAQLMHFLRRMIAN 158
BLAST of mRNA_P-wetherbeei_contig11921.1.1 vs. uniprot
Match: A0A5C0AY27_9BURK (MarR family transcriptional regulator n=1 Tax=Pigmentiphaga aceris TaxID=1940612 RepID=A0A5C0AY27_9BURK) HSP 1 Score: 130 bits (327), Expect = 2.740e-36 Identity = 71/121 (58.68%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 1 SMQRHFEKRMQPLDLTAMQWGPLLLMAEGRASTAAELARGMDIDTGAMTRMLDRLEAKGLVARARSASDRRVVQLELTAEGAKVASQIPQQLADVLNLHLKDFKADELHMLMGFLKRMIAN 363 SMQR + + P+DLTAMQW PLL MA G+A TAAELAR + +DTGAMTRMLDRLE KGL+ R+RSA DRRV++LELT EG A+QIP L V +H F +E ++ G L+RM+AN Sbjct: 34 SMQRAIDIEVAPMDLTAMQWTPLLRMAAGQADTAAELARVVGMDTGAMTRMLDRLEHKGLIRRSRSAEDRRVIKLELTEEGRHKANQIPPLLLKVTEMHFAGFDENEREIMKGLLRRMLAN 154
BLAST of mRNA_P-wetherbeei_contig11921.1.1 vs. uniprot
Match: A0A448C0L1_9BURK (Multiple antibiotic resistance protein marR n=7 Tax=Achromobacter TaxID=222 RepID=A0A448C0L1_9BURK) HSP 1 Score: 130 bits (326), Expect = 4.630e-36 Identity = 72/121 (59.50%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 1 SMQRHFEKRMQPLDLTAMQWGPLLLMAEGRASTAAELARGMDIDTGAMTRMLDRLEAKGLVARARSASDRRVVQLELTAEGAKVASQIPQQLADVLNLHLKDFKADELHMLMGFLKRMIAN 363 S+ R ++ M PLDLTAMQW PL ++ GRA T AELAR D+DTGAMTR LDRLEAKGL+ R+RS DRRVV++ELT G A +IP +A LN HL+ F ADE+ LM F++RMIAN Sbjct: 38 SLTRMLDQEMAPLDLTAMQWRPLAMVFLGRADTPAELARLNDMDTGAMTRALDRLEAKGLLRRSRSLEDRRVVKIELTELGEAKAREIPPSIARALNHHLRGFSADEVTQLMHFMRRMIAN 158
BLAST of mRNA_P-wetherbeei_contig11921.1.1 vs. uniprot
Match: UPI001F461444 (MarR family transcriptional regulator n=1 Tax=Achromobacter aestuarii TaxID=2511204 RepID=UPI001F461444) HSP 1 Score: 128 bits (322), Expect = 9.260e-36 Identity = 68/121 (56.20%), Postives = 90/121 (74.38%), Query Frame = 1 Query: 1 SMQRHFEKRMQPLDLTAMQWGPLLLMAEGRASTAAELARGMDIDTGAMTRMLDRLEAKGLVARARSASDRRVVQLELTAEGAKVASQIPQQLADVLNLHLKDFKADELHMLMGFLKRMIAN 363 S+ R ++ M PL LTAMQW P+ +A+G AST+ ELAR + +D+GAMTR LDRLEAKGL+ R RS DRRVV +ELTAEG + A +IP ++A LN +L+ F +DE+ ML FL+RM+AN Sbjct: 8 SLNRVLDQDMAPLGLTAMQWRPVACLAKGHASTSVELARILAVDSGAMTRTLDRLEAKGLLVRTRSKEDRRVVDIELTAEGQRTAKEIPARIARALNHYLRGFSSDEVDMLSHFLQRMLAN 128 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11921.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11921.1.1 >prot_P-wetherbeei_contig11921.1.1 ID=prot_P-wetherbeei_contig11921.1.1|Name=mRNA_P-wetherbeei_contig11921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=120bp MQRHFEKRMQPLDLTAMQWGPLLLMAEGRASTAAELARGMDIDTGAMTRMback to top mRNA from alignment at P-wetherbeei_contig11921:64..426- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11921.1.1 ID=mRNA_P-wetherbeei_contig11921.1.1|Name=mRNA_P-wetherbeei_contig11921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig11921:64..426- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11921:64..426- >mRNA_P-wetherbeei_contig11921.1.1 ID=mRNA_P-wetherbeei_contig11921.1.1|Name=mRNA_P-wetherbeei_contig11921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig11921:64..426- (Phaeothamnion wetherbeei SAG_119_79)back to top |