mRNA_P-wetherbeei_contig1187.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1187.3.1 vs. uniprot
Match: W4FM96_9STRA (Ribosomal protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FM96_9STRA) HSP 1 Score: 286 bits (733), Expect = 6.900e-93 Identity = 141/218 (64.68%), Postives = 172/218 (78.90%), Query Frame = 2 Query: 236 LHPVGTALHLVRANARAKFDETVEVALRLGVDPRKPNQSVRSMVSLPHGIGKTIRVAVFARGAEADKAREAGADVVGAEDLVESMQNGNVDFDRCLATPDMMPLVGRIGRVLGPRGLMPNPKLGTVMRDIALAVRTAKAGQVQFKADKDGLVRAGIGKASFALPALLDNLRTFMVAVSNAKPEGAKGKYVRGMHLSSTMGKGYRVDPVTIDPGSSKFM 889 L P+ AL + A KFDETV++ + LGVDPRKPNQSVRS+V+LPHG GK +RVAVFA+G +AD+AR AGA +VGAEDL+ +Q G +DFDRC+ATPDMM LVGR+ RVLGPRGLMPNPKLGTV +D+ A+ A GQV+F+A+K G+V AG+GK SF+ ALLDN+R FMVAV AKPEGAKGKYV+ HLSSTMG G R+DP +DP S +FM Sbjct: 44 LVPLNVALAACKQGAVRKFDETVDIVVELGVDPRKPNQSVRSVVTLPHGTGKVVRVAVFAKGDKADEARAAGATIVGAEDLLADIQAGKLDFDRCVATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVTAAITAAMGGQVEFRAEKKGIVHAGVGKVSFSDDALLDNIRAFMVAVGEAKPEGAKGKYVKACHLSSTMGHGIRLDPRQLDPSSPQFM 261
BLAST of mRNA_P-wetherbeei_contig1187.3.1 vs. uniprot
Match: A0A024UFR5_9STRA (Ribosomal protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024UFR5_9STRA) HSP 1 Score: 283 bits (724), Expect = 1.640e-91 Identity = 139/218 (63.76%), Postives = 173/218 (79.36%), Query Frame = 2 Query: 236 LHPVGTALHLVRANARAKFDETVEVALRLGVDPRKPNQSVRSMVSLPHGIGKTIRVAVFARGAEADKAREAGADVVGAEDLVESMQNGNVDFDRCLATPDMMPLVGRIGRVLGPRGLMPNPKLGTVMRDIALAVRTAKAGQVQFKADKDGLVRAGIGKASFALPALLDNLRTFMVAVSNAKPEGAKGKYVRGMHLSSTMGKGYRVDPVTIDPGSSKFM 889 L P+ AL + A KFDETV++ + LGVDPRKPNQSVRS+VSLPHG GK +RVAVFA+G +AD+AR AGA +VGAEDL+ +Q G +DFDRC+ATPDMM LVGR+ RVLGPRGLMPNPKLGTV +D+ A++ A+ GQV+F+A+K G+V AG+GK SF+ ALL+N+R FMVAV AKPEGAKGKY++ HLSSTMG+G R+D +DP S FM Sbjct: 45 LLPLNVALVECKQGAVRKFDETVDIVVELGVDPRKPNQSVRSVVSLPHGTGKVVRVAVFAKGDKADEARAAGAAIVGAEDLLADIQAGKLDFDRCVATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVTAAIKAAQGGQVEFRAEKKGIVHAGVGKVSFSDEALLENIRAFMVAVGEAKPEGAKGKYIKACHLSSTMGRGIRLDTRYLDPSSPHFM 262
BLAST of mRNA_P-wetherbeei_contig1187.3.1 vs. uniprot
Match: A0A067C8G8_SAPPC (Ribosomal protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C8G8_SAPPC) HSP 1 Score: 280 bits (716), Expect = 2.490e-90 Identity = 134/213 (62.91%), Postives = 174/213 (81.69%), Query Frame = 2 Query: 251 TALHLVRANARAKFDETVEVALRLGVDPRKPNQSVRSMVSLPHGIGKTIRVAVFARGAEADKAREAGADVVGAEDLVESMQNGNVDFDRCLATPDMMPLVGRIGRVLGPRGLMPNPKLGTVMRDIALAVRTAKAGQVQFKADKDGLVRAGIGKASFALPALLDNLRTFMVAVSNAKPEGAKGKYVRGMHLSSTMGKGYRVDPVTIDPGSSKFM 889 TAL + NA KFDETV++ + LGVDPRKPNQSVR +V+LP+G GKT+RVAVFA+G +A++A+ AGA +VGAEDL+ +Q G +DFDRC+ATPDMM LVGR+ RVLGPRGLMPNPKLGTV +D++ A+ AK GQV+F+A+K G+V AG+GK SF+ AL++N+R FMVA+ +AKPEGAKGKY++ MHLSSTMG G R++ +DP S +FM Sbjct: 49 TALANCKENAVRKFDETVDIVVELGVDPRKPNQSVRGVVTLPNGTGKTVRVAVFAKGEKAEEAKAAGATIVGAEDLLADIQAGKLDFDRCIATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVSAAISAAKGGQVEFRAEKKGIVHAGVGKVSFSDDALIENIRAFMVAIGDAKPEGAKGKYIKAMHLSSTMGPGIRLEARLLDPSSPQFM 261
BLAST of mRNA_P-wetherbeei_contig1187.3.1 vs. uniprot
Match: K3WYK8_GLOUD (Ribosomal protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYK8_GLOUD) HSP 1 Score: 280 bits (716), Expect = 3.710e-90 Identity = 134/201 (66.67%), Postives = 171/201 (85.07%), Query Frame = 2 Query: 287 KFDETVEVALRLGVDPRKPNQSVRSMVSLPHGIGKTIRVAVFARGAEADKAREAGADVVGAEDLVESMQNGNVDFDRCLATPDMMPLVGRIGRVLGPRGLMPNPKLGTVMRDIALAVRTAKAGQVQFKADKDGLVRAGIGKASFALPALLDNLRTFMVAVSNAKPEGAKGKYVRGMHLSSTMGKGYRVDPVTIDPGSSKFM 889 KFDET+++A++LGVDPRKPNQSVR +VSLP+G GKT+RVAVFARG +A++A+ AGA +VGAEDLVE +Q+G ++FDRC+ATPD+MPLVGR+ R+LGPRGLMPNPKLGTV D+A A+ AK GQV+F+A+K G++ AGIGKASF+ ALL+N+R FMVA+ +AKPEGAKGKY++ HLSSTMG G +D IDP S+ FM Sbjct: 72 KFDETIDIAVQLGVDPRKPNQSVRGVVSLPNGTGKTVRVAVFARGPKAEEAKAAGATIVGAEDLVELVQSGKLEFDRCIATPDVMPLVGRVARILGPRGLMPNPKLGTVTLDVADAISAAKGGQVEFRAEKKGIIHAGIGKASFSEEALLENVRAFMVALGDAKPEGAKGKYIKAAHLSSTMGPGLALDAKQIDPSSAFFM 272
BLAST of mRNA_P-wetherbeei_contig1187.3.1 vs. uniprot
Match: A0A8K1CQ82_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQ82_PYTOL) HSP 1 Score: 280 bits (716), Expect = 3.710e-90 Identity = 133/204 (65.20%), Postives = 174/204 (85.29%), Query Frame = 2 Query: 278 ARAKFDETVEVALRLGVDPRKPNQSVRSMVSLPHGIGKTIRVAVFARGAEADKAREAGADVVGAEDLVESMQNGNVDFDRCLATPDMMPLVGRIGRVLGPRGLMPNPKLGTVMRDIALAVRTAKAGQVQFKADKDGLVRAGIGKASFALPALLDNLRTFMVAVSNAKPEGAKGKYVRGMHLSSTMGKGYRVDPVTIDPGSSKFM 889 +R KFDETV++A++LGVDPRKPNQSVR +V+LP+G GKT+RVAVFARG +A++A+ AGA +VGAEDLVE +Q G +DFDRC+ATPD+MPLVGR+ R+LGPRGLMPNPKLGTV D+A A+ A+AGQV+F+A+K G+V AG+GK SF+ ALL+N+R F+VA+S+AKPEGAKGKY++ HLS+TMG G +D +DP S++FM Sbjct: 69 SRRKFDETVDIAIQLGVDPRKPNQSVRGVVALPNGTGKTVRVAVFARGVKAEEAKAAGAAIVGAEDLVEMVQKGQLDFDRCIATPDVMPLVGRVARILGPRGLMPNPKLGTVTVDVADAIAAAQAGQVEFRAEKKGIVHAGVGKVSFSEEALLENIRAFVVALSDAKPEGAKGKYIKAAHLSTTMGPGIALDIKYLDPSSAQFM 272
BLAST of mRNA_P-wetherbeei_contig1187.3.1 vs. uniprot
Match: A0A363TXH0_9BRAD (50S ribosomal protein L1 n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TXH0_9BRAD) HSP 1 Score: 276 bits (707), Expect = 2.490e-89 Identity = 137/228 (60.09%), Postives = 180/228 (78.95%), Query Frame = 2 Query: 209 ARQHAQGPALHPVGTALHLVRANARAKFDETVEVALRLGVDPRKPNQSVRSMVSLPHGIGKTIRVAVFARGAEADKAREAGADVVGAEDLVESMQNGNVDFDRCLATPDMMPLVGRIGRVLGPRGLMPNPKLGTVMRDIALAVRTAKAGQVQFKADKDGLVRAGIGKASFALPALLDNLRTFMVAVSNAKPEGAKGKYVRGMHLSSTMGKGYRVDPVTIDPGSSKFMA 892 AR+ L+P+G A+ LV+ A+AKFDET+EVA+ LGVDPR +Q VR +VSLP+G G+T+RVAVFARGA+A++A+ AGADVVGAEDLVE +QNGN+DFDRC+ATPD+MPLVGR+G+VLGPRGLMPNPK+GTV D+A AV+ AK G V+F+ +K G++ AG+GKASF+ L++N+R F AV AKP GAKG YV+ + +SSTMG G +V+P ++ SS A Sbjct: 11 AREGVDRTKLYPIGEAVKLVKERAKAKFDETIEVAMNLGVDPRHADQMVRGVVSLPNGSGRTMRVAVFARGAKAEEAKAAGADVVGAEDLVEKVQNGNIDFDRCIATPDLMPLVGRLGKVLGPRGLMPNPKVGTVTMDVANAVKGAKGGSVEFRVEKAGIIHAGVGKASFSADKLVENIRAFADAVQKAKPAGAKGTYVQRVAVSSTMGPGVKVEPASLFGASSSGNA 238
BLAST of mRNA_P-wetherbeei_contig1187.3.1 vs. uniprot
Match: A0A3R7KSH3_9STRA (Ribosomal protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KSH3_9STRA) HSP 1 Score: 277 bits (709), Expect = 4.390e-89 Identity = 133/215 (61.86%), Postives = 175/215 (81.40%), Query Frame = 2 Query: 245 VGTALHLVRANARAKFDETVEVALRLGVDPRKPNQSVRSMVSLPHGIGKTIRVAVFARGAEADKAREAGADVVGAEDLVESMQNGNVDFDRCLATPDMMPLVGRIGRVLGPRGLMPNPKLGTVMRDIALAVRTAKAGQVQFKADKDGLVRAGIGKASFALPALLDNLRTFMVAVSNAKPEGAKGKYVRGMHLSSTMGKGYRVDPVTIDPGSSKFM 889 V TA+ +A + KFDETV++A++LGVDPRKPNQSVR +VSLP+G GK +RVAVFARG +A++A+ AGA +VGAEDLVE +Q+G +DFDRC+ATPD+M LVGR+ R+LGPRGLMPNPKLGTV ++ A+ A+ GQV+F+A+K G++ AG+GK SF+ ALL+N+R FMVA+S+AKPEGAKGKY++ HLSSTMG Y +D +DP S+ FM Sbjct: 59 VMTAVSKCKAQKQLKFDETVDLAIQLGVDPRKPNQSVRGVVSLPNGTGKQVRVAVFARGPKAEEAKAAGATIVGAEDLVEQVQSGKLDFDRCIATPDVMALVGRVARILGPRGLMPNPKLGTVTMEVGEAIAAARGGQVEFRAEKKGIIHAGVGKVSFSEEALLENVRAFMVALSDAKPEGAKGKYIKAAHLSSTMGPSYTLDIKYLDPSSTSFM 273
BLAST of mRNA_P-wetherbeei_contig1187.3.1 vs. uniprot
Match: A0A3M0WQL6_9PROT (50S ribosomal protein L1 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M0WQL6_9PROT) HSP 1 Score: 275 bits (704), Expect = 5.980e-89 Identity = 142/219 (64.84%), Postives = 173/219 (79.00%), Query Frame = 2 Query: 209 ARQHAQGPALHPVGTALHLVRANARAKFDETVEVALRLGVDPRKPNQSVRSMVSLPHGIGKTIRVAVFARGAEADKAREAGADVVGAEDLVESMQNGNVDFDRCLATPDMMPLVGRIGRVLGPRGLMPNPKLGTVMRDIALAVRTAKAGQVQFKADKDGLVRAGIGKASFALPALLDNLRTFMVAVSNAKPEGAKGKYVRGMHLSSTMGKGYRVDPVTI 865 AR +GP +PV A+ L++ NA AKFDET+EVA+ LGVDPR +Q VR V+LPHG GK +RVAVFARGA+AD+AREAGADVVGAEDLVE +Q GN+DFDR +ATPDMMPLVGR+GR+LGPR LMPNPK+GTV D+A AV+ AK GQVQFK +K G+V AGIGKASF AL +NLR F+ AV+ AKP GAKG Y++ + +SSTMG G VD ++ Sbjct: 13 ARIGGKGP--YPVEEAVRLIKENATAKFDETIEVAVNLGVDPRHADQMVRGTVNLPHGTGKPVRVAVFARGAKADEAREAGADVVGAEDLVEQVQAGNIDFDRAIATPDMMPLVGRLGRILGPRNLMPNPKVGTVTMDVAGAVKAAKGGQVQFKVEKAGIVHAGIGKASFDEKALAENLRAFVDAVNKAKPSGAKGTYLKKVSISSTMGPGVSVDLASV 229
BLAST of mRNA_P-wetherbeei_contig1187.3.1 vs. uniprot
Match: A0A5D6Y1W5_9STRA (Ribosomal protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1W5_9STRA) HSP 1 Score: 276 bits (706), Expect = 9.900e-89 Identity = 130/201 (64.68%), Postives = 170/201 (84.58%), Query Frame = 2 Query: 287 KFDETVEVALRLGVDPRKPNQSVRSMVSLPHGIGKTIRVAVFARGAEADKAREAGADVVGAEDLVESMQNGNVDFDRCLATPDMMPLVGRIGRVLGPRGLMPNPKLGTVMRDIALAVRTAKAGQVQFKADKDGLVRAGIGKASFALPALLDNLRTFMVAVSNAKPEGAKGKYVRGMHLSSTMGKGYRVDPVTIDPGSSKFM 889 KFDET+++A++LGVDPRKPNQSVR +V+LP+G GKT+RVAVFARG +A++A+ AGA +VGAEDLVE +Q+G ++FDRC+ATPD+M LVGR+ R+LGPRGLMPNPKLGTV D+A A+ AK GQV+F+A+K G++ AGIGKASF+ LL+N+R FMVA+ +AKPEGAKGKY++ HLSSTMG G+ +D +DP S+ FM Sbjct: 66 KFDETIDIAVQLGVDPRKPNQSVRGVVTLPNGTGKTVRVAVFARGVKAEEAKAAGATIVGAEDLVEIVQSGKLEFDRCIATPDVMGLVGRVARILGPRGLMPNPKLGTVTVDVATAIAAAKGGQVEFRAEKKGIIHAGIGKASFSEEKLLENVRAFMVALGDAKPEGAKGKYIKAAHLSSTMGPGFALDAKQVDPSSAYFM 266
BLAST of mRNA_P-wetherbeei_contig1187.3.1 vs. uniprot
Match: A0A7C7PQN2_9PROT (50S ribosomal protein L1 n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A7C7PQN2_9PROT) HSP 1 Score: 274 bits (701), Expect = 1.590e-88 Identity = 128/207 (61.84%), Postives = 172/207 (83.09%), Query Frame = 2 Query: 233 ALHPVGTALHLVRANARAKFDETVEVALRLGVDPRKPNQSVRSMVSLPHGIGKTIRVAVFARGAEADKAREAGADVVGAEDLVESMQNGNVDFDRCLATPDMMPLVGRIGRVLGPRGLMPNPKLGTVMRDIALAVRTAKAGQVQFKADKDGLVRAGIGKASFALPALLDNLRTFMVAVSNAKPEGAKGKYVRGMHLSSTMGKGYRVD 853 A++ +G A+ L++ A+AKFDET+E+++ LGVDPR +Q+VR +VSLPHG GKT+RVAVFA+G +AD+AREAGAD+VGAEDL E +Q G++DFDRC+ATPDMMP+VGR+G+VLGPRGLMPNPKLGTV D+ A++ K GQV+F+A+K G+V AG+GKASF AL++N++ F+ A+S AKP GAKG Y++ + LSSTMG G RV+ Sbjct: 19 AIYDIGEAVKLIKERAKAKFDETIEISMNLGVDPRHADQNVRGVVSLPHGTGKTVRVAVFAKGPKADEAREAGADIVGAEDLAEKIQGGDMDFDRCIATPDMMPVVGRLGKVLGPRGLMPNPKLGTVTADVTAAIQAVKGGQVEFRAEKAGIVHAGVGKASFGEEALVENVKAFVEAISRAKPSGAKGTYIKRIALSSTMGPGLRVE 225 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1187.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1187.3.1 >prot_P-wetherbeei_contig1187.3.1 ID=prot_P-wetherbeei_contig1187.3.1|Name=mRNA_P-wetherbeei_contig1187.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=288bp MRRLFNAAAAAPRHASSCSLRRRRPAAASLPSRSAATKAARQHAQGPALHback to top mRNA from alignment at P-wetherbeei_contig1187:3293..4325+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1187.3.1 ID=mRNA_P-wetherbeei_contig1187.3.1|Name=mRNA_P-wetherbeei_contig1187.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1033bp|location=Sequence derived from alignment at P-wetherbeei_contig1187:3293..4325+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1187:3293..4325+ >mRNA_P-wetherbeei_contig1187.3.1 ID=mRNA_P-wetherbeei_contig1187.3.1|Name=mRNA_P-wetherbeei_contig1187.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=864bp|location=Sequence derived from alignment at P-wetherbeei_contig1187:3293..4325+ (Phaeothamnion wetherbeei SAG_119_79)back to top |