mRNA_P-wetherbeei_contig11868.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11868.1.1 vs. uniprot
Match: A0A0F9K9I6_9ZZZZ (Flg_hook domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9K9I6_9ZZZZ) HSP 1 Score: 80.1 bits (196), Expect = 1.130e-16 Identity = 41/88 (46.59%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 49 PMDQPALFAERLNQHISFMVGDHIQTAQIAVSPADLGPVEVRVTLVGDEAKIQLTATHAATREALNEALPRLRASFAEAGISLSQAGV 312 P Q + +++ +N + +M + IQ A++ ++PA+LGPVEV++ + D+A + TA HAATR+AL +ALPRLR SFAE GI L+ A V Sbjct: 30 PTIQSSAWSQVMNSRVVWMAKEGIQQAELKMTPANLGPVEVKLHMQNDQATVSFTAQHAATRDALEQALPRLRESFAENGIQLNHAEV 117
BLAST of mRNA_P-wetherbeei_contig11868.1.1 vs. uniprot
Match: A0A7C1W5H1_9GAMM (Flagellar hook-length control protein FliK n=1 Tax=Methylophaga aminisulfidivorans TaxID=230105 RepID=A0A7C1W5H1_9GAMM) HSP 1 Score: 80.1 bits (196), Expect = 2.480e-15 Identity = 41/88 (46.59%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 49 PMDQPALFAERLNQHISFMVGDHIQTAQIAVSPADLGPVEVRVTLVGDEAKIQLTATHAATREALNEALPRLRASFAEAGISLSQAGV 312 P Q + +++ +N + +M + IQ A++ ++PA+LGPVEV++ + D+A + TA HAATR+AL +ALPRLR SFAE GI L+ A V Sbjct: 339 PTIQSSAWSQVMNSRVVWMAKEGIQQAELKMTPANLGPVEVKLHMQNDQATVSFTAQHAATRDALEQALPRLRESFAENGIQLNHAEV 426
BLAST of mRNA_P-wetherbeei_contig11868.1.1 vs. uniprot
Match: A0A7X1TXX6_9PROT (Flg_hook domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7X1TXX6_9PROT) HSP 1 Score: 78.2 bits (191), Expect = 7.420e-15 Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 49 PMDQPALFAERLNQHISFMVGDHIQTAQIAVSPADLGPVEVRVTLVGDEAKIQLTATHAATREALNEALPRLRASFAEAGISLSQAGVFAQ 321 P+D P FA+ L+Q + +MVG Q A++ ++P +LGPVEVR+ + GD+A +Q + HA R A+ A+ RLR S A+AG+ L Q V A+ Sbjct: 204 PVDGPD-FAQALSQQVVWMVGKDAQVAELRINPPELGPVEVRLLISGDDAVVQFASAHAEVRSAIEAAIERLRESMAQAGVQLGQTSVSAE 293
BLAST of mRNA_P-wetherbeei_contig11868.1.1 vs. uniprot
Match: A0A3N5NFQ1_9PROT (Flagellar hook-length control protein FliK n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5NFQ1_9PROT) HSP 1 Score: 77.4 bits (189), Expect = 1.700e-14 Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 70 FAERLNQHISFMVGDHIQTAQIAVSPADLGPVEVRVTLVGDEAKIQLTATHAATREALNEALPRLRASFAEAGISLSQAGVFA 318 FAE L+Q + +M Q A++ ++P +LGPVEVR+TL GDEA Q + HA R A+ +L RLR + AEAGI L QA V A Sbjct: 241 FAEALSQRVVWMADKDAQVAELHLNPPELGPVEVRLTLAGDEASAQFVSPHAEVRNAIEASLARLREALAEAGIELGQASVSA 323
BLAST of mRNA_P-wetherbeei_contig11868.1.1 vs. uniprot
Match: UPI0019330DCE (flagellar hook-length control protein FliK n=1 Tax=Steroidobacter gossypii TaxID=2805490 RepID=UPI0019330DCE) HSP 1 Score: 75.5 bits (184), Expect = 5.000e-14 Identity = 39/83 (46.99%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 64 ALFAERLNQHISFMVGDHIQTAQIAVSPADLGPVEVRVTLVGDEAKIQLTATHAATREALNEALPRLRASFAEAGISLSQAGV 312 A +AE + ++ MV TA + +SP LGP+EVR+T+ GD+A +Q A HA TR A+ +ALPRLR FA G+SL+ A V Sbjct: 169 ARWAEEIGSRMTMMVEQGKHTASLRLSPEHLGPLEVRITMNGDQASVQFGAQHADTRSAIQDALPRLREMFASQGLSLADANV 251
BLAST of mRNA_P-wetherbeei_contig11868.1.1 vs. uniprot
Match: A0A523NY64_9PROT (Flagellar hook-length control protein FliK n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NY64_9PROT) HSP 1 Score: 75.9 bits (185), Expect = 5.910e-14 Identity = 37/84 (44.05%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 70 FAERLNQHISFMVGDHIQTAQIAVSPADLGPVEVRVTLVGDEAKIQLTATHAATREALNEALPRLRASFAEAGISLSQAGVFAQ 321 FAE L+Q I + +Q A+I ++P DLGPV++R+ + DE +QL + HA R+A+ EALPRLR F AG+ L+ + VF++ Sbjct: 236 FAEGLSQQIVLLAHGGVQQARITINPPDLGPVDLRIVVRNDEVVVQLASPHAVVRDAIEEALPRLREQFDSAGLRLADSEVFSE 319
BLAST of mRNA_P-wetherbeei_contig11868.1.1 vs. uniprot
Match: A0A1H7MU76_9GAMM (Flagellar hook-length control protein FliK n=2 Tax=Ectothiorhodospira TaxID=1051 RepID=A0A1H7MU76_9GAMM) HSP 1 Score: 75.1 bits (183), Expect = 9.860e-14 Identity = 38/93 (40.86%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 46 LPMDQPALFAERLNQHIS----FMVGDHIQTAQIAVSPADLGPVEVRVTLVGDEAKIQLTATHAATREALNEALPRLRASFAEAGISLSQAGV 312 +PM QP + + N+ + +MV ++Q A++ ++P LGP+E+RV++ GD A +Q A HAATR+ L+ A+PRLR FAE G+ L V Sbjct: 200 VPMPQPNMSQSKWNEAVGNRVLWMVNQNVQGAELRLNPPHLGPLEIRVSMEGDRANVQFLAPHAATRDTLDAAIPRLREMFAENGVQLGDVDV 292
BLAST of mRNA_P-wetherbeei_contig11868.1.1 vs. uniprot
Match: A0A0T5YY34_9GAMM (Flagellar hook-length control protein FliK n=6 Tax=sulfur-oxidizing symbionts TaxID=32036 RepID=A0A0T5YY34_9GAMM) HSP 1 Score: 74.3 bits (181), Expect = 1.100e-13 Identity = 38/89 (42.70%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 46 LPMDQPALFAERLNQHISFMVGDHIQTAQIAVSPADLGPVEVRVTLVGDEAKIQLTATHAATREALNEALPRLRASFAEAGISLSQAGV 312 +P+ QP + + L + +M+G +IQ A++ +SP LGP+E+RV+L D+A + A HAATR+A+ ALPRLR EA I+L+ V Sbjct: 140 MPVGQPE-WNQSLGDRLQWMIGRNIQQAEVRLSPPHLGPLEIRVSLQNDQASVSFVAQHAATRDAIEAALPRLREMLGEANINLADVDV 227
BLAST of mRNA_P-wetherbeei_contig11868.1.1 vs. uniprot
Match: I1YKP9_METFJ (Flagellar hook-length control protein FliK n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) TaxID=754477 RepID=I1YKP9_METFJ) HSP 1 Score: 74.7 bits (182), Expect = 1.890e-13 Identity = 39/77 (50.65%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 82 LNQHISFMVGDHIQTAQIAVSPADLGPVEVRVTLVGDEAKIQLTATHAATREALNEALPRLRASFAEAGISLSQAGV 312 ++ +S+M + IQ A++ ++PA LGPVEVR+ L D+A + A + ATREAL +ALPRLR S AE G+SL+QA V Sbjct: 308 VSSRVSYMAKEGIQQAELRLNPASLGPVEVRLQLQQDQASVTFLAQNQATREALEQALPRLRDSLAEQGLSLTQADV 384
BLAST of mRNA_P-wetherbeei_contig11868.1.1 vs. uniprot
Match: A0A0A0BK40_9GAMM (Flg_hook domain-containing protein n=1 Tax=Methylophaga thiooxydans TaxID=392484 RepID=A0A0A0BK40_9GAMM) HSP 1 Score: 74.7 bits (182), Expect = 2.000e-13 Identity = 44/102 (43.14%), Postives = 67/102 (65.69%), Query Frame = 1 Query: 19 TAHAAKPAPLPMDQPAL----FAERLNQHISFMVGDHIQTAQIAVSPADLGPVEVRVTLVGDEAKIQLTATHAATREALNEALPRLRASFAEAGISLSQAGV 312 TA +A+ LP+ QP L +++ +N + +M + + A++ ++PA+LGPVEVR+ + D+A + A H+ATR+AL +ALPRLR SFAEAGI L V Sbjct: 345 TAISAQGVSLPV-QPTLQNPAWSQVMNSRVVWMAKEGVHQAELRMTPANLGPVEVRLQVQNDQASVTFLAQHSATRDALEQALPRLRESFAEAGIELGHTEV 445 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11868.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11868.1.1 >prot_P-wetherbeei_contig11868.1.1 ID=prot_P-wetherbeei_contig11868.1.1|Name=mRNA_P-wetherbeei_contig11868.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=107bp EAQAPATAHAAKPAPLPMDQPALFAERLNQHISFMVGDHIQTAQIAVSPAback to top mRNA from alignment at P-wetherbeei_contig11868:2..322- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11868.1.1 ID=mRNA_P-wetherbeei_contig11868.1.1|Name=mRNA_P-wetherbeei_contig11868.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=321bp|location=Sequence derived from alignment at P-wetherbeei_contig11868:2..322- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11868:2..322- >mRNA_P-wetherbeei_contig11868.1.1 ID=mRNA_P-wetherbeei_contig11868.1.1|Name=mRNA_P-wetherbeei_contig11868.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=321bp|location=Sequence derived from alignment at P-wetherbeei_contig11868:2..322- (Phaeothamnion wetherbeei SAG_119_79)back to top |