mRNA_P-wetherbeei_contig118.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig118.5.1
Unique NamemRNA_P-wetherbeei_contig118.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: A0A835Z2T2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2T2_9STRA)

HSP 1 Score: 182 bits (462), Expect = 6.170e-50
Identity = 158/353 (44.76%), Postives = 185/353 (52.41%), Query Frame = 1
Query:  217 HCRQ---TDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRF--------------RCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALA---------------------------VQELMWGDATSLERHLAAFGPPEVLLGADVVCWPAFVEPFLLTVKALLQV------APRPADAA-LYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLDLAGNAAAAAEAVRWPDDG 1122
            +C Q   TDFDLTGQ++WPIS YM W V  + + FAGKRVVELGAGCGLSGLVASQ+AAATALTDG+DVVL LL R+   QR R                CG    G                   XXXXXXXXX    ++A      K+E+        XXXXXXXXXX      GA A                           V  L+WGD  +L+  L AFGPP+VLLGADVVCWPAF+ PFLLTV  LLQ       A R A AA LYLGYVCRA S T      A  LGL +  + +     +A  E   P ++    KL+A RVTL   G++ AA E   WP+ G
Sbjct:   36 YCSQAASTDFDLTGQIVWPISEYMAWLVRLSPAAFAGKRVVELGAGCGLSGLVASQYAAATALTDGSDVVLDLLRRSVALQRERAGSAARSEGRCVCATACGDLSTGCCXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGSSACLQCVCKAESHXXXXXXXXXXXXXXXXXACGNGGGACACATDDANSGSVGSPQEGRGSERCGELHVASLLWGDRRALDEFLEAFGPPDVLLGADVVCWPAFITPFLLTVNGLLQTVKGLLQASRDARAAALYLGYVCRATSTTDALMARAAALGLDIAPMPMPDNPYDA--EGRGPASIIAELKLQAFRVTL---GSSPAALEPPPWPEPG 383          
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: A0A7S1U585_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U585_9STRA)

HSP 1 Score: 162 bits (409), Expect = 4.520e-43
Identity = 120/330 (36.36%), Postives = 153/330 (46.36%), Query Frame = 1
Query:  178 TNLPRSRVHPWTPHCRQTDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPPEVLLGADVVCWPAFV---------------------------EPFLLTVKALLQVA----PRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLDLA 1074
            T L   R   +  +   TD+DLTGQV+WP+S+++ +++ARN  LFAG+RV ELGAGCGLSGLVASQFAA T LTDG DVV+RLLERNA  Q+                   LA P                              S   AE                       ++V +L+WG  TSLE  L  FG PEVL+GADVVCWP +V                           +P + T K L+Q+     P      L+LGYV RA +  R F  A +E GLRV  V    F+P        PE+V ++ +L+ L VT D A
Sbjct:   37 TPLREIRQDLYLSNAASTDWDLTGQVVWPVSIFLSYYIARNLELFAGRRVAELGAGCGLSGLVASQFAAGTCLTDGVDVVVRLLERNAALQKES---------------GTLARP------------------------------SGPDAE-----------------------ISVAQLLWGSETSLEAFLETFGVPEVLIGADVVCWPQYVSLNLXXXXXXXXXXXXXXWLRPNPEQVKPLVQTTKRLMQLRHAADPEGPPLVLHLGYVVRALNNHRLFVNACSEAGLRVAEVPDTAFVPHPR-----PEHVASNNELQLLTVTFDAA 293          
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: W7TUH9_9STRA (Methyltransferase-like protein 21a-like isoform 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUH9_9STRA)

HSP 1 Score: 151 bits (381), Expect = 9.550e-39
Identity = 100/288 (34.72%), Postives = 141/288 (48.96%), Query Frame = 1
Query:  208 WTPHCRQTDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGC-GLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPPEVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLD 1068
            W      TD D TG+++WPIS+++ WFVA  R LF  ++V+ELGAGC GL GL+AS+FA    +TDGN +VL  L+RN    RG FR   D        V  + +    G +             +N          +A                        G L  + L+WGD  S+E  +     P++LLGAD+VCW  FV P L TVK L   AP    A L+LG+V RA S  R  +  A   G+ V+ V  ETF+P  + +   P  ++T+ +L+ L ++LD
Sbjct:   41 WVSAASCTDHDQTGEIVWPISIFLSWFVAARRDLFRDQQVIELGAGCAGLPGLIASRFAKDVLVTDGNYLVLETLQRNVAETRGIFRTITDHSCEPGEPVEPMFKSTCYGQSTYDCSVGVGDEKALNNNSSAVAVSRDALTSC----------------WHEKGKLETRTLLWGDKESVEAVVNEGWRPQILLGADIVCWIDFVTPLLQTVKFLFLHAPDRERAVLFLGFVNRANSTERFLYAQARAFGMSVKRVPHETFMP--IEKRCWPSELQTAQELEVLSISLD 310          
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: A0A1V9ZIT3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIT3_9STRA)

HSP 1 Score: 147 bits (371), Expect = 4.690e-38
Identity = 108/298 (36.24%), Postives = 136/298 (45.64%), Query Frame = 1
Query:  229 TDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPP-EVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLDLAGNAAAAAEAVRWPDD 1119
            TD DLTGQV+WP+S+ + WFVA NR LF GK V+E+GAG GL+G VA+QFAA TA+TDGNDVVLRLL RN E                                                        ++A A                          V +L+WG+  S      AF  P +++LGADVVCWP  V P L T+K L+  AP     A Y G+VCRA +        A  +G R+  V  +TFLP        PENV +  +L  L   LD A  + AA E V + DD
Sbjct:   45 TDHDLTGQVVWPVSILLSWFVASNRDLFRGKTVLEVGAGAGLAGFVAAQFAAHTAITDGNDVVLRLLRRNVE-------------------------------------------------------HTDANA-------------------------GVYKLLWGEEASAVEFTEAFPHPVDIVLGADVVCWPNLVLPLLRTIKHLMHRAPDMFSTAFYCGFVCRATNTRDLLFAQAKAMGFRMWTVDHDTFLPTPR-----PENVFSVKELFLLGFQLDPA--SPAATEPVAFVDD 255          
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: G4Z339_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4Z339_PHYSP)

HSP 1 Score: 145 bits (367), Expect = 2.210e-37
Identity = 103/285 (36.14%), Postives = 130/285 (45.61%), Query Frame = 1
Query:  217 HCRQTDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPP-EVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLD 1068
            H   TD DLTGQV+WP+S ++ W++  +R   AGK VVELGAG GLSGLVASQFAA TALTDGND+VL LLE NAEA             A+ + V AL                                                                   L+WGD  S+E    AF  P +VL+GADVVCWP  V+P L T+K LL  +  P +     G+VCRA S        A   G R E V  + FLP        P +V ++ +L+ +  +LD
Sbjct:   46 HAASTDHDLTGQVVWPVSAFLAWYLVTHREEIAGKTVVELGAGAGLSGLVASQFAAHTALTDGNDIVLELLEENAEAN------------ADSSKVQAL------------------------------------------------------------------PLLWGDHESVEAFERAFPHPVDVLIGADVVCWPILVKPILQTIKYLLLRSRNPLETKFCCGFVCRAQSTEDLLFKEAVAFGFRFERVRDDDFLPTPR-----PADVTSNRELQLIVFSLD 247          
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: W4GX02_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GX02_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.520e-37
Identity = 100/281 (35.59%), Postives = 132/281 (46.98%), Query Frame = 1
Query:  229 TDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPP-EVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLD 1068
            TD DLTGQV+WP+S+ + WFVA NR+LF  K V+ELGAG GL+G VASQFA+ TA+TDGNDVVLRLL++NA+  +    CG                                                                              V +L+WG+  S+ +    F  P +VLLGADVVCWP  V P L T+K L+  + RP D   Y G+VCRA S    F   A  +G ++ +V    FLP        P NV ++ +L  L ++LD
Sbjct:   45 TDHDLTGQVVWPVSILLSWFVAANRALFQDKVVLELGAGAGLAGFVASQFASRTAITDGNDVVLRLLDQNAD--QASTPCG------------------------------------------------------------------------------VFKLLWGEEDSVVQFQKDFPHPIDVLLGADVVCWPNLVLPLLRTIKHLMHQSERPFDVVFYCGFVCRAQSTQDLFFAQAKGMGFKLWSVPHGDFLPTPR-----PVNVTSTLELNLLGLSLD 240          
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: A0A6G0X1R3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1R3_9STRA)

HSP 1 Score: 144 bits (364), Expect = 4.790e-37
Identity = 96/281 (34.16%), Postives = 130/281 (46.26%), Query Frame = 1
Query:  229 TDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPP-EVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLD 1068
            TD DLTGQV+WP+S+ + WFVA  R LF  + V+ELGAG GL+G VASQFA  TA+TDGNDVVLRLL++NA+       CG                                                                              V +L+WG+A S+E+    F  P +++LGADVVCWP  V P L T+K L+  A  P     Y G+VCRA +    F   A E+G ++  V  + FLP        P+NV ++ +L  + ++LD
Sbjct:   44 TDHDLTGQVVWPVSILLSWFVASKRDLFRDRTVLELGAGAGLAGFVASQFATRTAITDGNDVVLRLLDQNAD--EASTPCG------------------------------------------------------------------------------VFKLLWGEAASVEQFQKDFPHPIDIMLGADVVCWPNLVLPLLRTIKHLMYAAANPFSVVFYCGFVCRAQNTQDLFFQRAKEMGFKLWKVDHDEFLPTPR-----PDNVTSARELMLIGLSLD 239          
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: A0A7R9UCZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCZ9_9STRA)

HSP 1 Score: 144 bits (363), Expect = 6.370e-37
Identity = 91/248 (36.69%), Postives = 126/248 (50.81%), Query Frame = 1
Query:  229 TDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPPEVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAA----LYLGYVCRAASVTRQFHTAATELGLRV 960
            TD+DLTGQV+WP+S+++G+++A+NR LF G++V ELGAGCGLSGLVAS FA+ T LTDG +VV+RLLE+NA+ QR      R                                              SE  A                       ++ V  L WG  + L+  +  FG P+VL+GAD+VCWP +V P + T+K L+Q+     ++A    L+LGYVCRA +  R F    +E G  V
Sbjct:   77 TDWDLTGQVLWPVSIFLGYYIAKNRQLFEGQKVAELGAGCGLSGLVASHFASQTCLTDGEEVVVRLLEKNAQLQREGKALQRG---------------------------------------------SEEQA-----------------------SIGVACLRWGCQSDLDAFVDQFGVPDVLVGADIVCWPQYVRPLVQTLKRLMQLRFAEEESAEPLKLHLGYVCRALNNHRLFLDECSEYGFWV 256          
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: A0A485KPX6_9STRA (Aste57867_10238 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPX6_9STRA)

HSP 1 Score: 144 bits (362), Expect = 9.630e-37
Identity = 100/287 (34.84%), Postives = 130/287 (45.30%), Query Frame = 1
Query:  229 TDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPP-EVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLDLAGNAA 1086
            TD DLTGQV+WP+S+ + WFVA  R LF GK V+ELGAG GL+G VASQFA  TA+TDGNDVVLRLL++NA+  +    CG                                                                                +L+WG+  S+ +    F  P +V+LGADVVCWP  V P L T+K L+     P +   Y G+VCRA +    F   A  +G ++  V  + FLP        PENV +  +LK L + LD A  AA
Sbjct:   45 TDHDLTGQVVWPVSILLSWFVASKRDLFRGKTVLELGAGAGLAGFVASQFAKRTAITDGNDVVLRLLDQNAD--QASTPCG------------------------------------------------------------------------------TFKLLWGEEDSVGQFEKDFPYPIDVMLGADVVCWPNLVLPLLRTIKHLMHKTHAPLNVVFYCGFVCRAKNTQDLFFAQAVAMGFKLWTVDHDEFLPTPR-----PENVTSRLELKLLGLQLDAASPAA 246          
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: D0NFR1_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NFR1_PHYIT)

HSP 1 Score: 142 bits (359), Expect = 3.070e-36
Identity = 97/285 (34.04%), Postives = 130/285 (45.61%), Query Frame = 1
Query:  217 HCRQTDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFG-PPEVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLD 1068
            H   TD DLTGQV+WP+S+++ W++  +R+    K VVELGAG GLSGLVASQFAA TALTDGND+VL LLE NAE              A+ + V AL                                                                   L+WG+  S+E    AF  P ++L+GADV+CWP  V+P L T+K LL  + +P +     G+VCRA S  +     A   G   E +  +TFLP        P  V ++ +L+ +  TLD
Sbjct:   44 HAASTDHDLTGQVVWPVSIFLAWYLVAHRNEIVCKNVVELGAGAGLSGLVASQFAAHTALTDGNDIVLELLEENAETN------------ADSSKVKAL------------------------------------------------------------------PLLWGERQSVEAFEQAFPFPIDILIGADVICWPILVKPILQTIKYLLLRSRKPLETKFCCGFVCRAQSTEKLLFQEALAFGFHFERISEDTFLPTPR-----PSEVISNRELQLIVFTLD 245          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z2T2_9STRA6.170e-5044.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1U585_9STRA4.520e-4336.36Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
W7TUH9_9STRA9.550e-3934.72Methyltransferase-like protein 21a-like isoform 2 ... [more]
A0A1V9ZIT3_9STRA4.690e-3836.24Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
G4Z339_PHYSP2.210e-3736.14Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
W4GX02_9STRA2.520e-3735.59Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6G0X1R3_9STRA4.790e-3734.16Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7R9UCZ9_9STRA6.370e-3736.69Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A485KPX6_9STRA9.630e-3734.84Aste57867_10238 protein n=1 Tax=Aphanomyces stella... [more]
D0NFR1_PHYIT3.070e-3634.04Uncharacterized protein n=2 Tax=Phytophthora infes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig118contigP-wetherbeei_contig118:10089..11569 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog112098.XP_008609469.1
PFAMsMethyltransf_16
Model size1199
Max annot lvl2759|Eukaryota
KEGG koko:K21804,ko:K21806
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.39e-39
EggNOG OGsKOG2497@1|root,KOG2497@2759|Eukaryota
Descriptionmethyltransferase activity
Cds size1041
COG categoryJ
BRITEko00000,ko01000,ko03019,ko03110
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185926.5311852-UTR-P-wetherbeei_contig118:10088..102051683185926.5311852-UTR-P-wetherbeei_contig118:10088..10205Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig118 10089..10205 +
1683185926.5641193-UTR-P-wetherbeei_contig118:11528..115691683185926.5641193-UTR-P-wetherbeei_contig118:11528..11569Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig118 11529..11569 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185926.5460157-CDS-P-wetherbeei_contig118:10205..103401683185926.5460157-CDS-P-wetherbeei_contig118:10205..10340Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig118 10206..10340 +
1683185926.5552998-CDS-P-wetherbeei_contig118:10622..115281683185926.5552998-CDS-P-wetherbeei_contig118:10622..11528Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig118 10623..11528 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig118.5.1prot_P-wetherbeei_contig118.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig118 10206..11528 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig118.5.1

>prot_P-wetherbeei_contig118.5.1 ID=prot_P-wetherbeei_contig118.5.1|Name=mRNA_P-wetherbeei_contig118.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=347bp
MSTPIQSEIFDFNLAFAPSCTNLPRSRVHPWTPHCRQTDFDLTGQVIWPI
SVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVV
LRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADAGAAGAAG
SGVTINAAAAAAPTKSEATAEMPKRTAATTATSASAAAASAPGALAVQEL
MWGDATSLERHLAAFGPPEVLLGADVVCWPAFVEPFLLTVKALLQVAPRP
ADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIP
ENVRTSCKLKALRVTLDLAGNAAAAAEAVRWPDDGGAGGDTIAAPC*
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mRNA from alignment at P-wetherbeei_contig118:10089..11569+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig118.5.1 ID=mRNA_P-wetherbeei_contig118.5.1|Name=mRNA_P-wetherbeei_contig118.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1481bp|location=Sequence derived from alignment at P-wetherbeei_contig118:10089..11569+ (Phaeothamnion wetherbeei SAG_119_79)
ATTCTTTTACGATTAGGCGAGAGGCGGGAAACGTGATGACAGAGTTCACG TCCAGCTCTTAGGCACTCTAATCTGTTATCTCGAAGCACGAATTTCTCAC AACAACGTTTTGCTGCGATGTCCACTCCGATCCAATCAGAGATATTCGAC TTTAACCTCGCTTTTGCTCCGTCTTGCACAAATCTGCCGCGCTCCCGTGT TCATCCCTGGACTCCACATTGTCGCCAGACCGACTTCGATTTAACAGGCC AGGTAAGAGAATCTAAAGAGAGAGGCTTTCGCCGCCTTGGTCGTTTTATC CAGATATCGGTTTAAGGTCTTTTGTTCCTTATGCTGACAATGTCCCAAAA GACACGCGTTTCCTTTTTTAAACTCCTCGCCTTGAGTCGTTAGTGGCTAA CTTTTGCACAGGACCTAAGGTGTGTTTGCCAACACGCTTCGAAACGAAGG AGCTGCTTTGTGCCATTGCTTTTCGCTGCGGGTGAGCTGGCCTACACCTG ATTGCGAAGACTCCCGCACTCTCGTTCCTGGCAGGTGATCTGGCCCATTT CTGTATACATGGGGTGGTTCGTCGCCCGCAACCGCTCTCTTTTCGCTGGG AAGCGCGTCGTCGAGTTAGGCGCCGGCTGCGGGCTCAGCGGGCTCGTGGC CTCGCAGTTTGCGGCGGCGACAGCGCTCACGGATGGAAACGATGTTGTAT TGCGTCTGCTGGAGCGCAATGCCGAGGCGCAGCGGGGGCGGTTTCGGTGC GGAAGAGATGGAATTGGCGCGGAGTTTGCGATGGTGGCAGCGTTAGCGGA GCCCGTGGCAGCGGGTGCGGCAGATGCGGGGGCGGCGGGAGCGGCTGGCT CTGGAGTAACGATCAATGCAGCGGCAGCGGCGGCGCCGACGAAAAGCGAA GCGACGGCTGAAATGCCGAAGAGAACTGCTGCGACGACTGCAACTTCAGC GTCGGCTGCAGCGGCATCGGCGCCGGGCGCATTGGCCGTGCAAGAGCTGA TGTGGGGCGACGCCACCAGCCTGGAGCGGCATTTGGCGGCTTTTGGTCCG CCGGAAGTCCTTCTCGGAGCCGATGTGGTCTGCTGGCCGGCGTTTGTCGA GCCGTTCCTCCTGACGGTGAAGGCGCTGCTGCAGGTGGCGCCGCGGCCCG CCGACGCCGCGCTCTACCTTGGCTACGTTTGCCGCGCCGCGTCGGTCACG CGGCAGTTCCACACCGCCGCAACGGAACTGGGCTTGCGGGTCGAGGCGGT CGGTGTGGAGACGTTCCTGCCCGAGGCGCTGTCGGAAGCGACGATCCCGG AGAACGTGCGGACGAGCTGCAAGCTCAAGGCGCTGCGGGTGACGCTGGAC CTGGCAGGGAACGCGGCGGCGGCGGCGGAAGCTGTTCGATGGCCCGACGA CGGTGGCGCTGGAGGTGATACGATTGCGGCACCCTGCTAGACTCAGATAG AATATTTATAAGCTCCGATCCCTTTTCGTCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig118:10089..11569+

>mRNA_P-wetherbeei_contig118.5.1 ID=mRNA_P-wetherbeei_contig118.5.1|Name=mRNA_P-wetherbeei_contig118.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1041bp|location=Sequence derived from alignment at P-wetherbeei_contig118:10089..11569+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCCACTCCGATCCAATCAGAGATATTCGACTTTAACCTCGCTTTTGC
TCCGTCTTGCACAAATCTGCCGCGCTCCCGTGTTCATCCCTGGACTCCAC
ATTGTCGCCAGACCGACTTCGATTTAACAGGCCAGGTGATCTGGCCCATT
TCTGTATACATGGGGTGGTTCGTCGCCCGCAACCGCTCTCTTTTCGCTGG
GAAGCGCGTCGTCGAGTTAGGCGCCGGCTGCGGGCTCAGCGGGCTCGTGG
CCTCGCAGTTTGCGGCGGCGACAGCGCTCACGGATGGAAACGATGTTGTA
TTGCGTCTGCTGGAGCGCAATGCCGAGGCGCAGCGGGGGCGGTTTCGGTG
CGGAAGAGATGGAATTGGCGCGGAGTTTGCGATGGTGGCAGCGTTAGCGG
AGCCCGTGGCAGCGGGTGCGGCAGATGCGGGGGCGGCGGGAGCGGCTGGC
TCTGGAGTAACGATCAATGCAGCGGCAGCGGCGGCGCCGACGAAAAGCGA
AGCGACGGCTGAAATGCCGAAGAGAACTGCTGCGACGACTGCAACTTCAG
CGTCGGCTGCAGCGGCATCGGCGCCGGGCGCATTGGCCGTGCAAGAGCTG
ATGTGGGGCGACGCCACCAGCCTGGAGCGGCATTTGGCGGCTTTTGGTCC
GCCGGAAGTCCTTCTCGGAGCCGATGTGGTCTGCTGGCCGGCGTTTGTCG
AGCCGTTCCTCCTGACGGTGAAGGCGCTGCTGCAGGTGGCGCCGCGGCCC
GCCGACGCCGCGCTCTACCTTGGCTACGTTTGCCGCGCCGCGTCGGTCAC
GCGGCAGTTCCACACCGCCGCAACGGAACTGGGCTTGCGGGTCGAGGCGG
TCGGTGTGGAGACGTTCCTGCCCGAGGCGCTGTCGGAAGCGACGATCCCG
GAGAACGTGCGGACGAGCTGCAAGCTCAAGGCGCTGCGGGTGACGCTGGA
CCTGGCAGGGAACGCGGCGGCGGCGGCGGAAGCTGTTCGATGGCCCGACG
ACGGTGGCGCTGGAGGTGATACGATTGCGGCACCCTGCTAG
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